GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002093-TA|BGIBMGA002093-PA|IPR004853|Protein of unknown
function DUF250
         (255 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.9  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 44  KAKL-GLHNPVDMVFHVQPWMFLALIPFTAI 73
           KA++  L   VD+   +  W FL LI FT++
Sbjct: 182 KAQIYSLRETVDVFNDIFGWPFLLLITFTSL 212


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 44  KAKL-GLHNPVDMVFHVQPWMFLALIPFTAI 73
           KA++  L   VD+   +  W FL LI FT++
Sbjct: 182 KAQIYSLRETVDVFNDIFGWPFLLLITFTSL 212


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 44  KAKL-GLHNPVDMVFHVQPWMFLALIPFTAI 73
           KA++  L   VD+   +  W FL LI FT++
Sbjct: 502 KAQIYSLRETVDVFNDIFGWPFLLLITFTSL 532


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 177 ESAVVVEVDNFEAVKNRSPNKLKSVARNKIYHLNCVSFRSPNKDETDE 224
           E  V  EVD  E ++N +  K+K  A ++       SF S    E DE
Sbjct: 863 EVVVKKEVDEEERLENHTSVKIKREAEDRDEDER--SFHSNGAKEEDE 908


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.138    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,257
Number of Sequences: 317
Number of extensions: 1667
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 4
length of query: 255
length of database: 114,650
effective HSP length: 55
effective length of query: 200
effective length of database: 97,215
effective search space: 19443000
effective search space used: 19443000
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 42 (21.0 bits)