GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002092-TA|BGIBMGA002092-PA|undefined
         (200 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052095-1|AAK93519.1|  469|Drosophila melanogaster SD04505p pro...    96   3e-20
AE014296-666|AAF47777.1|  469|Drosophila melanogaster CG14971-PA...    96   3e-20

>AY052095-1|AAK93519.1|  469|Drosophila melanogaster SD04505p
           protein.
          Length = 469

 Score = 96.3 bits (229), Expect = 3e-20
 Identities = 48/106 (45%), Positives = 64/106 (60%)

Query: 54  TFYQRWLLRDFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTG 113
           TFYQ  + R   +PL +V YHLVVK+LL+   R +        ++ L    ++R +APTG
Sbjct: 101 TFYQTDINRQMPFPLAIVTYHLVVKFLLAAAARRIYRMRVGRSRVQLDWRLALRKMAPTG 160

Query: 114 LSSGIDVGFSNWGLELVTISLYTMTKSTTXXXXXXXXXXXXXEKKT 159
           ++S ID+GFSNWGL LV ISLYTMTKS+T             EKK+
Sbjct: 161 VASAIDIGFSNWGLALVPISLYTMTKSSTIVFILLFAIAFGLEKKS 206


>AE014296-666|AAF47777.1|  469|Drosophila melanogaster CG14971-PA
           protein.
          Length = 469

 Score = 96.3 bits (229), Expect = 3e-20
 Identities = 48/106 (45%), Positives = 64/106 (60%)

Query: 54  TFYQRWLLRDFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTG 113
           TFYQ  + R   +PL +V YHLVVK+LL+   R +        ++ L    ++R +APTG
Sbjct: 101 TFYQTDINRQMPFPLAIVTYHLVVKFLLAAAARRIYRMRVGRSRVQLDWRLALRKMAPTG 160

Query: 114 LSSGIDVGFSNWGLELVTISLYTMTKSTTXXXXXXXXXXXXXEKKT 159
           ++S ID+GFSNWGL LV ISLYTMTKS+T             EKK+
Sbjct: 161 VASAIDIGFSNWGLALVPISLYTMTKSSTIVFILLFAIAFGLEKKS 206


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.135    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,263,545
Number of Sequences: 52641
Number of extensions: 247293
Number of successful extensions: 420
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 418
Number of HSP's gapped (non-prelim): 2
length of query: 200
length of database: 24,830,863
effective HSP length: 81
effective length of query: 119
effective length of database: 20,566,942
effective search space: 2447466098
effective search space used: 2447466098
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)