Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002092-TA|BGIBMGA002092-PA|undefined
(200 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g14410.1 68416.m01823 transporter-related low similarity to S... 33 0.13
At1g21870.1 68414.m02737 glucose-6-phosphate/phosphate transloca... 31 0.70
At5g55950.1 68418.m06978 transporter-related low similarity to U... 30 0.92
At1g77610.1 68414.m09036 glucose-6-phosphate/phosphate transloca... 30 0.92
At4g32390.1 68417.m04612 phosphate translocator-related low simi... 30 1.2
At5g25400.1 68418.m03013 phosphate translocator-related low siim... 27 6.5
At2g25520.1 68415.m03055 phosphate translocator-related low simi... 27 6.5
At5g05820.1 68418.m00640 phosphate translocator-related low simi... 27 8.6
At1g06890.1 68414.m00732 transporter-related low similarity to S... 27 8.6
>At3g14410.1 68416.m01823 transporter-related low similarity to
SP|Q96A29 GDP-fucose transporter 1 {Homo sapiens},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275; contains 10
predicted transmembrane domains;
Length = 340
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 55 FYQRWLLR----DFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVA 110
F+ +W+L +F YPL + + H++ +L L+ VL + + L + + SV
Sbjct: 31 FFNKWVLSSKEINFPYPLGLTLLHMIFSSVLCFLLTKVLKIVKVEEGMTLEI--YVTSVI 88
Query: 111 PTGLSSGIDVGFSNWGLELVTISLYTMTKS 140
P G + + N ++++ M K+
Sbjct: 89 PIGAMFAMTLWLGNTAYLYISVAFAQMLKA 118
>At1g21870.1 68414.m02737 glucose-6-phosphate/phosphate
translocator-related similar to glucose 6
phosphate/phosphate translocators from Pisum sativum]
GI:2997591, [Mesembryanthemum crystallinum] GI:9295277,
[Solanum tuberosum] GI:2997593; contains Pfam profile
PF00892: Integral membrane protein
Length = 341
Score = 30.7 bits (66), Expect = 0.70
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 58 RWLLR--DFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLS 115
+W+ + DFK+PL+V H + + + +V VL P +V+ R + P
Sbjct: 34 KWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVL---KLKPLIVVDPEDRWRRIFPMSFV 90
Query: 116 SGIDVGFSNWGLELVTISLYTMTKSTT 142
I++ N L + +S KS T
Sbjct: 91 FCINIVLGNISLRYIPVSFMQTIKSLT 117
>At5g55950.1 68418.m06978 transporter-related low similarity to
UDP-sugar transporter [Drosophila melanogaster]
GI:14971008, UDP-glucuronic acid transporter [Homo
sapiens] GI:11463949
Length = 398
Score = 30.3 bits (65), Expect = 0.92
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 64 FKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLSSGIDVGFS 123
F +P+ + + H V W+L +S+ P P + A +SG+ +
Sbjct: 84 FNFPIFLTLIHYTVAWILLAFFKSLSLLPMSPPSKTTPFSSLFSLGAVMAFASGL----A 139
Query: 124 NWGLELVTISLYTMTK 139
N L+ ++ Y M K
Sbjct: 140 NTSLKHNSVGFYQMAK 155
>At1g77610.1 68414.m09036 glucose-6-phosphate/phosphate
translocator-related similar to
glucose-6-phosphate/phosphate-translocators from
[Mesembryanthemum crystallinum] GI:9295277, [Solanum
tuberosum] GI:2997593, [Pisum sativum] GI:2997591;
contains Pfam profile PF00892: Integral membrane protein
Length = 336
Score = 30.3 bits (65), Expect = 0.92
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 58 RWLLR--DFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLS 115
+W+ + DFK+PL+V H + + + +V VL P +V+ R + P
Sbjct: 28 KWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVL---KLKPLIVVDPEDRWRRIFPMSFV 84
Query: 116 SGIDVGFSNWGLELVTISLYTMTKSTT 142
I++ N L + +S KS T
Sbjct: 85 FCINIVLGNVSLRYIPVSFMQTIKSFT 111
>At4g32390.1 68417.m04612 phosphate translocator-related low
similarity to phosphoenolpyruvate/phosphate translocator
precursor [Mesembryanthemum crystallinum] GI:9295275,
SP|P52178 Triose phosphate/phosphate translocator,
non-green plastid, chloroplast precursor (CTPT)
{Brassica oleracea}
Length = 350
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 63 DFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLSSGIDVGF 122
++ +P+T+ M H+ L+V++ V + + T IRSV P G + +
Sbjct: 46 NWPFPITLTMIHMAFCSSLAVILIKVFKIVEPVS---MSRDTYIRSVVPIGALYSLSLWL 102
Query: 123 SNWGLELVTISLYTMTKS 140
SN +++S M K+
Sbjct: 103 SNSAYIYLSVSFIQMLKA 120
>At5g25400.1 68418.m03013 phosphate translocator-related low
siimilarity to phosphoenolpyruvate/phosphate
translocator precursor [Mesembryanthemum crystallinum]
GI:9295275, SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea}
Length = 349
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 63 DFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLSSGIDVGF 122
D+ +P+++ M H+ L+ L+ V + + T +RSV P G + +
Sbjct: 46 DWPFPISLTMIHMSFCSTLAFLLIKVFKFVEPVS---MSRDTYLRSVVPIGALYSLSLWL 102
Query: 123 SNWGLELVTISLYTMTKS 140
SN +++S M K+
Sbjct: 103 SNSAYIYLSVSFIQMLKA 120
>At2g25520.1 68415.m03055 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 347
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 63 DFKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLSSGIDVGF 122
++ +P+T+ M H+ L+V++ V + + T +RSV P G + +
Sbjct: 46 NWPFPITLTMIHMGFCSSLAVILIKVFKVVEPVS---MSRETYLRSVVPIGALYSLSLWL 102
Query: 123 SNWGLELVTISLYTMTKS 140
SN +++S M K+
Sbjct: 103 SNSAYIYLSVSFIQMLKA 120
>At5g05820.1 68418.m00640 phosphate translocator-related low
similarity to phosphoenolpyruvate/phosphate translocator
precursor [Mesembryanthemum crystallinum] GI:9295275,
glucose-6-phosphate/phosphate-translocator precursor
[Zea mays] GI:2997589; contains Pfam profile PF00892:
Integral membrane protein
Length = 309
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 64 FKYPLTVVMYHLVVKWLLSVLVRSVLYCITKTPQLVLPLGTSIRSVAPTGLSSGIDVGFS 123
FKYP+ + M H+ LLS + + L + P + +A L + V F
Sbjct: 38 FKYPIFLTMCHMTACSLLSYVAIAWLKMV---PMQTIRSRVQFFKIAALSLVFCVSVVFG 94
Query: 124 NWGLELVTISLYTMTKSTT 142
N L + +S +TT
Sbjct: 95 NISLRFLPVSFNQAIGATT 113
>At1g06890.1 68414.m00732 transporter-related low similarity to
SP|Q9NTN3 UDP-glucuronic acid/UDP-N-acetylgalactosamine
transporter {Homo sapiens}, SP|Q95YI5 UDP-sugar
transporter UST74c {Drosophila melanogaster}, SP|Q18779
UDP-sugar transporter sqv-7 {Caenorhabditis elegans};
contains 8 predicted transmembrane domains
Length = 357
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 107 RSVAPTGLSSGIDVGFSNWGLELVTISLYTMTK 139
R+V G+ +GI +G N L ++ Y MTK
Sbjct: 73 RAVMGFGILNGISIGLLNLSLGFNSVGFYQMTK 105
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.135 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,065,724
Number of Sequences: 28952
Number of extensions: 124835
Number of successful extensions: 257
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 254
Number of HSP's gapped (non-prelim): 10
length of query: 200
length of database: 12,070,560
effective HSP length: 78
effective length of query: 122
effective length of database: 9,812,304
effective search space: 1197101088
effective search space used: 1197101088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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