BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002091-TA|BGIBMGA002091-PA|IPR007087|Zinc finger,
C2H2-type
(570 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 607 e-175
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 33 0.020
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 30 0.14
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 30 0.14
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 29 0.44
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 26 2.3
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 25 4.1
AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450 CY... 25 5.4
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 25 5.4
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 25 7.2
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 25 7.2
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 25 7.2
AF487536-1|AAL93297.1| 504|Anopheles gambiae cytochrome P450 CY... 24 9.5
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 607 bits (1499), Expect = e-175
Identities = 286/499 (57%), Positives = 358/499 (71%), Gaps = 27/499 (5%)
Query: 7 QYQTVTLVPSENSGGEVSYVLVVQEETKP-INLDIKVDQDEEKVSEDVYNFXXXXXXXXX 65
+++ +T P ++ G VSYVL++ + K + L+ + Q + K +E +Y+F
Sbjct: 47 EFEGLTDEPDKSEEG-VSYVLIMNDADKSTLVLNDEPSQGDSKDNE-IYDFEDPDYIVQE 104
Query: 66 XXXXXXSEAKKAQPQTKKGK-FLRPCFTCNFCSYSSHRRYLLLRHMKSHSEDRPHKCGVC 124
AKK Q + K+ + + CN+C+Y+S++ +LL RH+K+HSEDRPHKC VC
Sbjct: 105 EQ----EPAKKTQTRGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVC 160
Query: 125 ERGFKTIASLQNHLNMHNGVKPHVCKFCNSPFTTSGELVRHVRYKHTHEKPHKCTECDYA 184
ERGFKT+ASLQNH+N H G KPH CK C++ FTTSGEL+RH+RY+HTHE+PHKCTECDYA
Sbjct: 161 ERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYA 220
Query: 185 SVELSKLRRHVRCHTGERPYQCPHCTYASPDTFKLKRHLRTHTGEKPYKCEHCNMCFTQS 244
SVELSKL+RH+R HTGE+P+QCPHCTYASPD FKL RH+R HTGEKPY C+ C FTQS
Sbjct: 221 SVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQS 280
Query: 245 NSLKAHKLIHNVSEKPVYACELCPTKCGRKTDLRIHVQKLHTSDKPLKCKRCGKTFPDRY 304
NSLKAHK+IH V KPV+ C+LCPT CGRKTDLRIHVQ LHT+DKP+KCKRC TFPDRY
Sbjct: 281 NSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRY 340
Query: 305 SCKMHNKTHNGEKCYKCELCPYASTTLRHLKSHMLKHTDEKPFSCDQCDQSFRQKQLLRR 364
S KMH KTH GEKCY+CE CPYAS ++RHL+SH+L HTD+KP+ CDQC Q+FRQKQLL+R
Sbjct: 341 SYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKR 400
Query: 365 HQNLYHNPHYVAKPPKEKTHSCHECKRNFAHKGNLIRHLATHDPESGHQEKLLALKMGRE 424
H N YHNP YVA PK KTH C CKR F HKGNLIRH+A HDPES +++ AL+ GR+
Sbjct: 401 HMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMHDPESTVSKEMEALREGRQ 460
Query: 425 KKIKY-LNGPIIK--------DSENDDPDVIRLGLGT--------TGLNSNDLKRGELVT 467
KK++ I K + E D+ D G T L + L ++VT
Sbjct: 461 KKVQITFEEEIYKGEEDYEGEEDEEDEEDEYE-GDDTEEDEEDEDDELAAGPLGTSDVVT 519
Query: 468 VADGEGQQYVVLEVIQMED 486
V DG+G QYVVLEVIQ++D
Sbjct: 520 VEDGDG-QYVVLEVIQLQD 537
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 33.1 bits (72), Expect = 0.020
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 124 CERGFKTIASLQNHLNMHNGVKPHVCKFCNSPFTTSGELVRHVRYKH 170
C KT+++ +H N+H + H C C FT + H + KH
Sbjct: 901 CVSCHKTVSNRWHHANIHRP-QSHECPVCGQKFTRRDNMKAHCKVKH 946
Score = 25.8 bits (54), Expect = 3.1
Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 365 HQNLYHNPHYVAKPPKEKTHSCHECKRNFAHKGNLIRHLATHDPE 409
H+ + + H+ A + ++H C C + F + N+ H PE
Sbjct: 905 HKTVSNRWHH-ANIHRPQSHECPVCGQKFTRRDNMKAHCKVKHPE 948
Score = 24.2 bits (50), Expect = 9.5
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Query: 199 TGERP--YQCPHCTYASPDTFKLKRHLRTHTGEKPYKCEHCNMCFTQSNSLKAH 250
TG P Y C C + + H H + ++C C FT+ +++KAH
Sbjct: 892 TGTFPTLYSCVSCHKTVSNRW---HHANIHRPQS-HECPVCGQKFTRRDNMKAH 941
Score = 24.2 bits (50), Expect = 9.5
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 261 VYACELCPTKCGRKTDLRIHVQKLHTSDKPLKCKRCGKTFPDRYSCKMHNKTHNGE 316
+Y+C C + R H +H +C CG+ F R + K H K + E
Sbjct: 898 LYSC----VSCHKTVSNRWHHANIHRPQSH-ECPVCGQKFTRRDNMKAHCKVKHPE 948
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 30.3 bits (65), Expect = 0.14
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 93 CNFCSYSSHRRYLLLRHMKSHSEDRPHKCGVCERGFKTIASLQNHLNMHNGVKPHVCKFC 152
C C R+ H SH+ R C C + I +L++HL + + + + KF
Sbjct: 529 CRSCGKEVTNRW---HHFHSHTPQRS-LCPYCPASYSRIDTLRSHLRIKHADRLNAPKFS 584
Query: 153 NSP 155
N P
Sbjct: 585 NPP 587
Score = 27.5 bits (58), Expect = 1.0
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 101 HRRYLLLRHMKSHSEDRPHK----CGVCERGFKTIASLQNHLNMHNGVKPHVCKFCNSPF 156
H Y L M H+ P + C K + + +H + H + +C +C + +
Sbjct: 502 HTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWHHFHSHTPQRS-LCPYCPASY 560
Query: 157 TTSGELVRHVRYKH 170
+ L H+R KH
Sbjct: 561 SRIDTLRSHLRIKH 574
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 30.3 bits (65), Expect = 0.14
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 93 CNFCSYSSHRRYLLLRHMKSHSEDRPHKCGVCERGFKTIASLQNHLNMHNGVKPHVCKFC 152
C C R+ H SH+ R C C + I +L++HL + + + + KF
Sbjct: 505 CRSCGKEVTNRW---HHFHSHTPQRS-LCPYCPASYSRIDTLRSHLRIKHADRLNAPKFS 560
Query: 153 NSP 155
N P
Sbjct: 561 NPP 563
Score = 27.5 bits (58), Expect = 1.0
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 101 HRRYLLLRHMKSHSEDRPHK----CGVCERGFKTIASLQNHLNMHNGVKPHVCKFCNSPF 156
H Y L M H+ P + C K + + +H + H + +C +C + +
Sbjct: 478 HTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWHHFHSHTPQRS-LCPYCPASY 536
Query: 157 TTSGELVRHVRYKH 170
+ L H+R KH
Sbjct: 537 SRIDTLRSHLRIKH 550
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 28.7 bits (61), Expect = 0.44
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 11/140 (7%)
Query: 278 RIHVQKLHTSDKPL-----KCKRCGKTFPDRYSCKMHNKTHN-GEKCYKCELCPYASTTL 331
R VQ+L T+ P +C CG F + + H+ T + S
Sbjct: 274 RPKVQQLDTAAAPTNHHLYRCPACGNLFVELTNFYNHSCTKAPAQDGVAVASSNNQSQPA 333
Query: 332 RHLKSHMLKHTDEKPFSCDQCDQSFRQKQLLRRHQNLYHNPHYVAKPPKEKTHSCHECKR 391
R S + ++ + F C+ CD S+R K ++H+ + H ++ + C C +
Sbjct: 334 RTGGSAVTITSEGQRFQCNLCDMSYRTKLQYQKHE---YEVHRISN--ENFGIKCTICHK 388
Query: 392 NFAHKGNLIRHLATHDPESG 411
F+ + + H+ P+ G
Sbjct: 389 LFSQRQDYQLHMRAIHPKPG 408
Score = 25.4 bits (53), Expect = 4.1
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 114 SEDRPHKCGVCERGFKTIASLQNH-------LNMHNGVKPHVCKFCNSPFTTSGELVRHV 166
SE + +C +C+ ++T Q H N + G+K C C+ F+ + H+
Sbjct: 344 SEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIK---CTICHKLFSQRQDYQLHM 400
Query: 167 RYKH 170
R H
Sbjct: 401 RAIH 404
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 26.2 bits (55), Expect = 2.3
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 358 QKQLLRRHQNLYHNPHYVAKPPKEKTHSCHECKRNFAHKG 397
+++L R QN Y+ +Y + + + CK+ A+ G
Sbjct: 190 EEELYARRQNCYYYYYYNEEEDDDTYQDYYSCKKRIAYDG 229
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 25.4 bits (53), Expect = 4.1
Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 5/105 (4%)
Query: 299 TFPDRYSCKMHNKTHNGEKCYKCELCPYASTTLRHLKSHMLKHTDEKPFSCDQCDQSFRQ 358
TF DR+S +H+ T E L H HM D + + + +
Sbjct: 142 TFKDRFSSMVHDSTEMPEVLKLQYLLSALKGDAAHQFEHMQITADNYYVTWEALLKRYDN 201
Query: 359 KQLLRRHQNLYHNPHYVAKPPKEKTHSCHECKRNFAHKGNLIRHL 403
++L+R Y Y + K KT S E R L+R L
Sbjct: 202 SKVLKRE---YFKAFYSLE--KMKTDSTEELARIVNEANRLVRGL 241
>AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450
CYP12F3 protein.
Length = 515
Score = 25.0 bits (52), Expect = 5.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 447 RLGLGTTGLNSNDLKRGELVTVADGEGQQYV 477
R L TTG+ + D + G L + GEGQ+ V
Sbjct: 201 RWALETTGVLALDTRLGVLHSTDSGEGQRLV 231
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 25.0 bits (52), Expect = 5.4
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
Query: 234 CEHCNMCFTQSNSLKAHKLIHNVSEKPVYACELCPTKCGRKTDLRIHVQKLHTSDKPLKC 293
CE C C + N K P+ C T C + I V+K+ T D+
Sbjct: 671 CEKCPTCAGRCNEFKHCVQCQQYKTGPLAEANECATNC--TLFVPIPVEKV-TIDEERND 727
Query: 294 KRCGKTFPDRYSCK 307
+C TF D C+
Sbjct: 728 NKC--TFFDEDDCR 739
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 24.6 bits (51), Expect = 7.2
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 322 ELCPYASTTLRHLKSHMLKHTDEKPFSCDQ--CDQSFRQKQLLRRHQNL 368
E +A L H + M+++ ++ + D+ C+ R++QLL QNL
Sbjct: 336 ETIHFALPELLHNLNLMVEYCEQDIITIDKQKCEAKDREEQLLHEKQNL 384
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 24.6 bits (51), Expect = 7.2
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 82 KKGKFLRPCFTCNFCSYSSHRRYLLLRHMKSHSE 115
K F +P F+ + CS HR +R + H++
Sbjct: 452 KSPAFKQPAFSHSVCSTEVHRSCFCVRFIAEHTK 485
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 24.6 bits (51), Expect = 7.2
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 82 KKGKFLRPCFTCNFCSYSSHRRYLLLRHMKSHSE 115
K F +P F+ + CS HR +R + H++
Sbjct: 452 KSPAFKQPAFSHSVCSTEVHRSCFCVRFIAEHTK 485
>AF487536-1|AAL93297.1| 504|Anopheles gambiae cytochrome P450
CYP6Y1 protein.
Length = 504
Score = 24.2 bits (50), Expect = 9.5
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 234 CEHCNMCFTQSNSLKAHKLIHNVSEKPVYAC 264
CEH N S+ ++ H L+ + + AC
Sbjct: 158 CEHLNESLQSSDEIEVHDLLSRYTIDVIGAC 188
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.319 0.133 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,950
Number of Sequences: 2123
Number of extensions: 26051
Number of successful extensions: 119
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 52
Number of HSP's gapped (non-prelim): 23
length of query: 570
length of database: 516,269
effective HSP length: 68
effective length of query: 502
effective length of database: 371,905
effective search space: 186696310
effective search space used: 186696310
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 50 (24.2 bits)
- SilkBase 1999-2023 -