Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002090-TA|BGIBMGA002090-PA|IPR007087|Zinc finger,
C2H2-type, IPR007086|Zinc finger, C2H2-subtype
(230 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 68 1e-12
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 66 4e-12
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 65 9e-12
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 61 1e-10
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 61 2e-10
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 57 2e-09
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 51 1e-07
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 48 2e-06
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 48 2e-06
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 47 2e-06
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 45 8e-06
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 44 1e-05
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 35 0.012
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 31 0.14
SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|c... 28 1.0
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 28 1.0
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 28 1.0
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 28 1.0
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 27 1.8
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 27 1.8
SPAC24H6.02c |||TIM23 translocase complex subunit Tim15|Schizosa... 27 1.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 5.3
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 26 5.3
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 26 5.3
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 26 5.3
SPBC12D12.02c |cdm1||DNA polymerase delta subunit Cdm1|Schizosac... 25 7.1
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 25 7.1
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 68.1 bits (159), Expect = 1e-12
Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 170 LKPYSCSACGQVFSRSDHLATHQRTHTGEKPYRC--PSCPYAACRRDMITRHMRTHSRR 226
+K Y C C +VF R +H H R+HTGEKP+ C PSC RRD + RH+RTH R+
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
Score = 54.8 bits (126), Expect = 1e-08
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 145 YECEVCLRRFARSDMLTRHARLHSGLKPYSCS--ACGQVFSRSDHLATHQRTH 195
YEC C R F R + RH R H+G KP+ CS +C + F+R D L H RTH
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 110 TYTCETCGQTFTMHDRLAKHIASRHRNRTPEAARLYECEV--CLRRFARSDMLTRHARLH 167
+Y C C + F + +HI S H P +EC C +RF R D L RH R H
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIRS-HTGEKP-----FECSYPSCKKRFTRRDELIRHVRTH 56
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 66.1 bits (154), Expect = 4e-12
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 141 AARLYEC--EVCLRRFARSDMLTRHARLHSGLKPYSC--SACGQVFSRSDHLATHQRTHT 196
A +++ C E C ++++R +L +H R HS +P+ C + C + F R HL H+R HT
Sbjct: 19 AKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHT 78
Query: 197 GEKPYRC--PSCPYAACRRDMITRHMRTHSRRPQP 229
KP+ C C + + RH+ H R+P+P
Sbjct: 79 NVKPFSCHYDGCDAQFYTQQHLERHIEVH-RKPKP 112
Score = 47.2 bits (107), Expect = 2e-06
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 112 TCETCGQTFTMHDRLAKHIASRHRNRTPEAARLYEC--EVCLRRFARSDMLTRHAR-LHS 168
+C CG+ F L H+ H+ T E + Y C E C + F RS L +H +H
Sbjct: 205 SCSICGRQFKTAAHLRHHVVL-HQT-TLEERKTYHCPMEGCKKSFTRSSALKKHISVIHE 262
Query: 169 GLKPYSCSACGQVFSRSDHLATHQRTHTGEKPYR 202
G + C +CG F L H T +K ++
Sbjct: 263 GNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHK 296
Score = 46.4 bits (105), Expect = 4e-06
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 100 HEQPSPAPEITYTCETCGQTFTMHDRLAKHIASRHRNRTPEAARLYECEVCLRRFARSDM 159
H +P P T E C + F+ H +L HI++ H + P +CE+ RFA
Sbjct: 107 HRKPKP---YACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCEL---RFATKQK 160
Query: 160 LTRHA-RLHSGLKPYSCSACGQVFSRSDHLATHQRTHTGEKPYRCPSCPYAACRRDMIT- 217
L H R H + YSC V + + H E PSC + C R T
Sbjct: 161 LQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREA--HVPSC--SICGRQFKTA 216
Query: 218 RHMRTH 223
H+R H
Sbjct: 217 AHLRHH 222
Score = 42.7 bits (96), Expect = 4e-05
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 15/175 (8%)
Query: 58 DKLSVQLQNNNLYPPTQHWPALNPPFQNNKPPADEPLDLSVKHEQPSPAPEITYTCETCG 117
++LS+++++ NL + + P++ P L +H + + + E + C+ G
Sbjct: 5 NELSIEIESKNLRSAKK---IFHCPYEECGKKYSRP-SLLEQHLR-THSNERPFVCDYTG 59
Query: 118 QTFTMHDRLAKHIASR-HRNRTPEAARLYECEVCLRRFARSDMLTRHARLHSGLKPYSCS 176
+ + + I R H N P + C+ +F L RH +H KPY+C+
Sbjct: 60 CSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDA---QFYTQQHLERHIEVHRKPKPYACT 116
Query: 177 --ACGQVFSRSDHLATH-QRTHTGEKPYRC--PSCPYAACRRDMITRHM-RTHSR 225
C + FS+ L +H HT PY C C + + H+ R H +
Sbjct: 117 WEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEK 171
Score = 41.9 bits (94), Expect = 8e-05
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 20/123 (16%)
Query: 109 ITYTC--ETC--GQTFTMHDRLAKHIASRHRNRTPEAARLYECEVCLRRFARSDMLTRHA 164
I+Y+C E+C + F +L HI H + C +C R+F + L H
Sbjct: 173 ISYSCPHESCVGHEGFEKWSQLQNHIREAH---------VPSCSICGRQFKTAAHLRHHV 223
Query: 165 RLHSGL----KPYSC--SACGQVFSRSDHLATHQRT-HTGEKPYRCPSCPYAACRRDMIT 217
LH K Y C C + F+RS L H H G + C SC + M+
Sbjct: 224 VLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQ 283
Query: 218 RHM 220
RH+
Sbjct: 284 RHL 286
Score = 39.1 bits (87), Expect = 5e-04
Identities = 40/135 (29%), Positives = 52/135 (38%), Gaps = 21/135 (15%)
Query: 96 LSVKHEQPSPAPEITYTCETCGQTFTMHDRLAKHIASRHRNRTPEAARLYEC--EVCLRR 153
+S H P P TY + C F +L H+ NR E Y C E C+
Sbjct: 134 ISACHTHLLPYP-CTY--QDCELRFATKQKLQNHV-----NRAHEKIISYSCPHESCVGH 185
Query: 154 --FARSDMLTRHARLHSGLKPYSCSACGQVFSRSDHL----ATHQRTHTGEKPYRCP--S 205
F + L H R P SCS CG+ F + HL HQ T K Y CP
Sbjct: 186 EGFEKWSQLQNHIR--EAHVP-SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEG 242
Query: 206 CPYAACRRDMITRHM 220
C + R + +H+
Sbjct: 243 CKKSFTRSSALKKHI 257
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 64.9 bits (151), Expect = 9e-12
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 137 RTPEAARLYECEVCLRRFARSDMLTRHARLHSGLKPYSCS--ACGQVFSRSDHLATHQRT 194
+ P+A R Y+C +C + F R + TRH R H+G KP+ C+ C + FSRSD L H R
Sbjct: 18 KNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARI 77
Query: 195 HTGEKPYRCPSCPYAA 210
HT R + AA
Sbjct: 78 HTNANSRRNAAAAAAA 93
Score = 60.5 bits (140), Expect = 2e-10
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 171 KPYSCSACGQVFSRSDHLATHQRTHTGEKPYRC--PSCPYAACRRDMITRHMRTHS 224
+PY C C + F R +H H RTHTGEKP+ C P C R D +TRH R H+
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 43.6 bits (98), Expect = 2e-05
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 111 YTCETCGQTFTMHDRLAKHIASRHRNRTPEAARLYECEVCLRRFARSDMLTRHARLHS 168
Y C C + F + +HI R T E + C +RF+RSD LTRHAR+H+
Sbjct: 26 YKCPLCTKAFYRLEHQTRHI----RTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 61.3 bits (142), Expect = 1e-10
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 131 ASRHRNRTPEAARLYECEVCLRRFARSDMLTRHARLHSGLKPYSCS-------ACGQVFS 183
A + N P+ + Y CE C R FAR + L RH R H+ KP++CS CG+ FS
Sbjct: 56 AKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFS 115
Query: 184 RSDHLATH-QRTHTGEKPYR 202
R D L H Q+ H +P R
Sbjct: 116 RRDLLLRHQQKIHRNPQPRR 135
Score = 56.4 bits (130), Expect = 3e-09
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 170 LKPYSCSACGQVFSRSDHLATHQRTHTGEKPYRC-------PSCPYAACRRDMITRHMRT 222
+K Y C C + F+R +HL H R+HT EKP+ C C RRD++ RH +
Sbjct: 67 VKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQK 126
Query: 223 HSRRPQP 229
R PQP
Sbjct: 127 IHRNPQP 133
Score = 44.0 bits (99), Expect = 2e-05
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Query: 59 KLSVQLQNNNLYPPTQHWPALNPPFQNNKPPADEPLDLSVKHEQPSPAPEIT-YTCETCG 117
K+S L + N T + + N+KP A + K + +P ++ Y CETC
Sbjct: 20 KVSENLMSINSDSGTSNANTPSSVTSNSKPVASST---AAKKDPNAPPQKVKQYVCETCT 76
Query: 118 QTFTMHDRLAKHIASRHRNRTPEAARLYE--CEVCLRRFARSDMLTRH-ARLHSGLKP 172
+ F + L +HI S H N P + C R+F+R D+L RH ++H +P
Sbjct: 77 RAFARLEHLKRHIRS-HTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHRNPQP 133
Score = 30.3 bits (65), Expect = 0.25
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 100 HEQPSPAPEITYTCETCGQTFTMHDRLAKHIASRHRNRTPEAAR 143
+E+P EI CG+ F+ D L +H HRN P R
Sbjct: 94 NEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKIHRNPQPRRRR 137
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 60.9 bits (141), Expect = 2e-10
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 116 CGQTFTMHDRLAKHIASRHRNRTPEAARLYECEVCLRRFARSDMLTRHARLHSGLKPYSC 175
C + FT L H+ + H N P ++C +C + FAR RH +LH+G+K ++C
Sbjct: 577 CNKRFTRAYNLKSHM-NTHTNYRP-----FQCSICKKSFARQHDKRRHEQLHTGIKAFAC 630
Query: 176 SACGQVFSRSDHLATHQRTHTGEKPYR 202
C Q F+R D L H ++ G+ R
Sbjct: 631 VTCNQRFARMDALNRHYKSEVGQNCLR 657
Score = 60.9 bits (141), Expect = 2e-10
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 150 CLRRFARSDMLTRHARLHSGLKPYSCSACGQVFSRSDHLATHQRTHTGEKPYRCPSCPYA 209
C +RF R+ L H H+ +P+ CS C + F+R H++ HTG K + C +C
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Query: 210 ACRRDMITRHMRT 222
R D + RH ++
Sbjct: 637 FARMDALNRHYKS 649
Score = 40.3 bits (90), Expect = 2e-04
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 173 YSCS--ACGQVFSRSDHLATHQRTHTGEKPYRCPSCPYAACRRDMITRHMRTHS 224
Y C+ C + F+R+ +L +H THT +P++C C + R+ RH + H+
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHT 623
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 99 KHEQPSPAPEITYTCETCGQTFTMHDRLAKHIAS 132
+HEQ + + C TC Q F D L +H S
Sbjct: 617 RHEQLHTGIK-AFACVTCNQRFARMDALNRHYKS 649
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 57.2 bits (132), Expect = 2e-09
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 108 EITYTCETCGQTFTMHDRLAKHIASRHRN--RTPEAARLYECEVCLRRFARSDMLTRHAR 165
E T T G +M R + ++R + R+P + + C C ++F RS+ L RH R
Sbjct: 385 EATEQIGTIGTDGSMKRRKRRQPSNRKTSVPRSP-GGKSFVCPECSKKFKRSEHLRRHIR 443
Query: 166 -LHSGLKPYSCSACGQVFSRSDHLATHQRTHTGEKP 200
LH+ KP+ C CG+ FSR D+L H+R H P
Sbjct: 444 SLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 51.2 bits (117), Expect = 1e-07
Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 77 PALNPPFQNNKPPADEPLDLSV-----KHEQPSPAPEITYT--CETCGQTFTMHDRLAKH 129
P + + P E DLS+ +H+ P I+Y C+T Q+ + +
Sbjct: 371 PCITVKEEEQLAPKIESADLSITPQVTEHDSKPPV-RISYDHRCKTRKQSTRICRIPPET 429
Query: 130 IASRHRNRTPEAARLYEC--EVCLRRFARSDMLTRHARLHSGLKPYSCSACGQVFSRSDH 187
+AS + PEA Y C C +R AR + H + H +PY C C F R
Sbjct: 430 MASLYCG--PEADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHD 487
Query: 188 LATHQRTHTGEKPYRCPSCPYAACRRDMITRH 219
L H R H +PY C C R D + RH
Sbjct: 488 LKRHLRIHENGRPYVC-ECLKRFNRLDALNRH 518
Score = 45.2 bits (102), Expect = 8e-06
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 19/184 (10%)
Query: 51 QRLSRLLDKLSVQLQNNNLYPPTQHWPALNPPFQN---NKPPADEPLDLSVKHEQPSPAP 107
++ S + D + + N N+ AL+ P+++ K P EP ++VK E+ AP
Sbjct: 329 EKFSSVCDH-GLDISNANINNTLTQQFALSAPYESCIVTKKP--EPC-ITVKEEEQL-AP 383
Query: 108 EITYTCETCGQTFTMHD-RLAKHIASRHRNRTPEAARLYECEVCLRRFARSDMLTRHARL 166
+I + T HD + I+ HR +T R +C R M + +
Sbjct: 384 KIESADLSITPQVTEHDSKPPVRISYDHRCKT----RKQSTRIC--RIPPETMASLYCGP 437
Query: 167 HSGLKPYSC--SACGQVFSRSDHLATHQRTHTGEKPYRCPSCPYAACRRDMITRHMRTHS 224
+ K Y C + C + +R ++ +H +TH ++PYRC C R + RH+R H
Sbjct: 438 EADGK-YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHE 496
Query: 225 R-RP 227
RP
Sbjct: 497 NGRP 500
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 47.6 bits (108), Expect = 2e-06
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 150 CLRRFARSDMLTRHARLHSGLKPYSCSACGQVFSRSDHLATH-QRTH 195
C + F R + L RH R H +K +SCS C + F+RSD L H Q+ H
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
Score = 45.6 bits (103), Expect = 6e-06
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 160 LTRHARLHS-GLKPYSCSA--CGQVFSRSDHLATHQRTHTGEKPYRCPSCPYAACRRDMI 216
L + +R H G + C+ C + F+R +HL H+RTH K + C C A R D++
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 217 TRHMR 221
RH++
Sbjct: 72 NRHVQ 76
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 107 PEITYTCETCGQTFTMHDRLAKHIASRHRNRTPEAARLYECEVCLRRFARSDMLTRHAR 165
P T C ++FT + L +H RT E + + C C R FARSD+L RH +
Sbjct: 24 PRFYCTYPDCPKSFTRKEHLRRH------ERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 28.7 bits (61), Expect = 0.76
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 188 LATHQRTHT-GEKPYRC--PSCPYAACRRDMITRHMRTH 223
L R H G+ + C P CP + R++ + RH RTH
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTH 50
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 47.6 bits (108), Expect = 2e-06
Identities = 45/193 (23%), Positives = 74/193 (38%), Gaps = 13/193 (6%)
Query: 40 SPPNTQNLNKRQ-RLSRLLDKLSVQLQNNNLYPPTQHWPALNP---PFQNNKPPADEPL- 94
+PP + LN + + S N++ P +P P +NN + P
Sbjct: 332 APPASNTLNHANGNQAENASESSTSQSNDSQGPANTSYPVSVPLPNDAENNHTLSRNPYI 391
Query: 95 -DLSVKHEQPSPAPEITYTCETCGQTFTMHDRLAKHIASRHRNRTPEAARLYECEVCLRR 153
L+ K + + Q M + + + H N + A + R+
Sbjct: 392 PSLNFKDNMSAELSVVATLASNSAQAHPMGQQSDSNYSDHHNN--DKRAHVSRRHSTSRK 449
Query: 154 FARSDMLTRHARLHSGLKPYSCSACGQVFSRSDHLATHQRTHTGEKPYRCPSCPYAACRR 213
A+S + + ++ Y C+ C Q FSR L H +HTGE+P+ C YA C +
Sbjct: 450 IAQSHTGSSSTSSAANVR-YRCTECLQGFSRPSSLKIHTYSHTGERPF---VCDYAGCGK 505
Query: 214 DMITR-HMRTHSR 225
R +MR H R
Sbjct: 506 AFNVRSNMRRHQR 518
Score = 47.6 bits (108), Expect = 2e-06
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 127 AKHIASRHR--NRTPEAARL-YECEVCLRRFARSDMLTRHARLHSGLKPYSC--SACGQV 181
++ IA H + T AA + Y C CL+ F+R L H H+G +P+ C + CG+
Sbjct: 447 SRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKA 506
Query: 182 FSRSDHLATHQRTH 195
F+ ++ HQR H
Sbjct: 507 FNVRSNMRRHQRIH 520
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 47.2 bits (107), Expect = 2e-06
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 140 EAARLYECEVCLRRFARSDMLTRHARLHSGLKPYSCSACGQVFSRSDHLATH-QRTH 195
++ R++ C+ C +RF R + LTRH HS +P C C R D L H QR H
Sbjct: 26 DSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFH 82
Score = 44.4 bits (100), Expect = 1e-05
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 173 YSCSACGQVFSRSDHLATHQRTHTGEKPYRCPSCPYAACRRDMITRHMR 221
+ C C + F+R ++L H+ H+ +P CP C R+D++ RH++
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
Score = 34.7 bits (76), Expect = 0.012
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 96 LSVKHEQPSPA---PEITYTCETCGQTFTMHDRLAKHIASRHRNRTPEAARLYECEVCLR 152
LS K + P+ + + C+ C + FT H+ L +H A H P C C
Sbjct: 13 LSAKRKLTEPSLIDSKRVFPCDQCAKRFTRHENLTRHKAC-HSKAEP-----IPCPYCEI 66
Query: 153 RFARSDMLTRH-ARLHS 168
+ R D+L RH R H+
Sbjct: 67 KCKRKDLLKRHIQRFHN 83
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 45.2 bits (102), Expect = 8e-06
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 173 YSCS--ACGQVFSRSDHLATHQRTHTGEKPYRCPSCPYAACRRDMITRHM 220
Y C C + F+R +H H R+HT K + CP C + R D++ RH+
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 145 YECEV--CLRRFARSDMLTRHARLHSGLKPYSCSACGQVFSRSDHLATH 191
Y+C+ C + F R + RH R H+ K + C C F+RSD L H
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 33.1 bits (72), Expect = 0.035
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 108 EITYTCET--CGQTFTMHDRLAKHIASRHRNRTPEAARLYECEVCLRRFARSDMLTRH 163
+I Y C+ C ++FT + +H S H N ++ + C C F RSD+L RH
Sbjct: 14 DIRYKCDFQGCTKSFTRKEHARRHFRS-HTN-----SKAFICPHCSSSFTRSDVLNRH 65
Score = 25.4 bits (53), Expect = 7.1
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 111 YTCETCGQTFTMHDRLAKHIASRH 134
+ C C +FT D L +H+ +H
Sbjct: 47 FICPHCSSSFTRSDVLNRHVNQKH 70
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 44.4 bits (100), Expect = 1e-05
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 175 CSACGQVFSRSDHLATHQRTHTGEKPYRC--PSCPYAACRRDMITRHMRT 222
C G V + L H R+HTGEKP+ C P C + R D + +HMRT
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
Score = 40.3 bits (90), Expect = 2e-04
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 160 LTRHARLHSGLKPYSCSA--CGQVFSRSDHLATHQRT 194
L H R H+G KP+ CS C + F+RSD LA H RT
Sbjct: 93 LVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
Score = 29.5 bits (63), Expect = 0.43
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 111 YTCE--TC---GQTFTMHDRLAKHIASRHRNRTPEAARLYECEVCLRRFARSDMLTRHAR 165
YTCE C G T L H+ S H P + EC+ R F RSD L +H R
Sbjct: 73 YTCEWDDCPRKGMVQTSRFALVAHLRS-HTGEKPFICSVPECD---RSFTRSDALAKHMR 128
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 116 CGQTFTMHDRLAKHIASRHRNRT 138
C ++FT D LAKH+ + H T
Sbjct: 113 CDRSFTRSDALAKHMRTVHEADT 135
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 34.7 bits (76), Expect = 0.012
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 112 TCETCGQTFTMHDRLAKHIASRHRNRTPEAARLYECEVC--LRRFARSDMLTRHARLHSG 169
T E C F+ L +H + H P ++ CE+C R F+R D L RH R+ G
Sbjct: 581 TGEICNTVFSRTYDLIRHQDTIHAKTRP----VFRCEICGDQRHFSRHDALVRHLRVKHG 636
Score = 32.3 bits (70), Expect = 0.062
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 178 CGQVFSRSDHLATHQRT-HTGEKP-YRCPSC--PYAACRRDMITRHMRT-HSR 225
C VFSR+ L HQ T H +P +RC C R D + RH+R H R
Sbjct: 585 CNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVKHGR 637
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 31.1 bits (67), Expect = 0.14
Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 126 LAKHIASRHRNRTPEAARLYECEVCLRRFARSDMLTRHARLHSGLKPYS---CSACGQVF 182
L + SR + + + ++ R M R R+ L+P CS C F
Sbjct: 125 LMARVLSRSKKQEERENHSSDARDAIKSALRRRMRRREGRVQKALRPTPNLICSKCNTTF 184
Query: 183 SRSDHLATHQRTHTGEKPYR 202
+ S L H+ T + P++
Sbjct: 185 NHSTALMMHEATCLNQVPFK 204
>SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 371
Score = 28.3 bits (60), Expect = 1.0
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 57 LDKLSVQLQNNNLYPPTQHWPAL-NPPFQNNKPP---ADEPLDLSVKHEQPSPAPE 108
+DK L N+++ + PAL NPP Q++ ADE LD + H + P PE
Sbjct: 215 VDKPISDLIENDIH---ESLPALQNPPIQSHSETDLYADEELDSILMHHERPPIPE 267
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 58 DKLSVQLQNNNLYPPTQHWPALNPPFQNNKPPADEPLDLSVKHEQP-SPAPEIT 110
DK++ L+ N PT H+P + P D D+++K+ +P +P P ++
Sbjct: 238 DKIAF-LKLNESEIPTYHYPLYTAELDPSLPEFDYNKDMAIKYPKPGNPNPSVS 290
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 28.3 bits (60), Expect = 1.0
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 9/108 (8%)
Query: 13 SWTKTLVAPGHAEGTSGFVGTMAQAAGSPPNTQNLNKRQRLSRLLDKLSVQLQNNNLYP- 71
S TK+ V+ H+ +S M ++ P N + +Q S L S+ ++N +
Sbjct: 293 SQTKSAVSNNHSRNSSKDASFMMKSF-IPSNRSHPQTQQNESSLFSDNSMVNSSSNSFSL 351
Query: 72 -PTQHWP------ALNPPFQNNKPPADEPLDLSVKHEQPSPAPEITYT 112
P P L PFQ KPP+ + + +Q P I +T
Sbjct: 352 FPNATLPNPPSSELLTTPFQQIKPPSQVFMSTGLLSKQHRPRKNINFT 399
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 28.3 bits (60), Expect = 1.0
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 20 APGHAEGTSGFVGTMAQAAGSPPNTQNLNK---RQRLSRLLDKLSVQLQNNNLYP--PTQ 74
+PG E +S F T A+ + N ++ K + Q++ L P P +
Sbjct: 852 SPGSCETSSAFAKTYAEKEVTSINLPSVRKPLDESYYDHSISPFDPLCQSSFLAPQTPVK 911
Query: 75 HWPALNPPFQNNKPPADEPLDLSVKHEQPSPAP 107
AL P + N PP EP+D S E P P P
Sbjct: 912 SKHAL-PLVEANAPPW-EPIDFSSLLESPVPNP 942
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 67 NNLYPPTQHWPALNPPFQNNKPPADEPLDLSVKHEQPSPAPEI 109
NN PT + PA + P + + P P+ S +P P +
Sbjct: 397 NNFLAPTSNVPAYSTPARPTESPPPPPISSSSTTPRPDDKPSL 439
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 90 ADEPLDLSVKHEQPSPAPEITYTCETCGQTFTMHDRLAKHIAS-RHRNRTPEAAR 143
A + L + ++E+ E CE C + F + H+AS +HR+ + R
Sbjct: 49 AGKILSIQKQNEEVQKKAEFYQNCEVCNKKFYSEGAYSSHMASKKHRDNLSKFQR 103
>SPAC24H6.02c |||TIM23 translocase complex subunit
Tim15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 175
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Query: 173 YSCSACGQVFSRSDHLATHQRTHTGEKPYRCPSCPYAACRRDMITRHMRTHS 224
++C+ C +RS+H + Q H G +CP C R ++ H++ S
Sbjct: 80 FTCTVCN---TRSNHNFSKQAYHNGTVLVQCPKCK----NRHLMADHLKIFS 124
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 5.3
Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 77 PALNPPFQNNKPPADEPLDLSVKHEQPSPAPEITYTCETCGQTFTMHDRLAKHIASRHRN 136
PA P Q PP+ + S E + PE+ T E+ + + DR A+ A R
Sbjct: 1182 PAPAAP-QTLNPPSVSTVQQSKPIESNTHTPEVKATSESPSASSNLEDRAARIKAEAQRR 1240
Query: 137 RTPEAARL 144
A L
Sbjct: 1241 MNERLAAL 1248
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.8 bits (54), Expect = 5.3
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Query: 146 ECEVCLRRFARSDMLTRHARLHSGLKPYSCSACGQVFSRSDH 187
+CE C F D L +H R K C C QV R H
Sbjct: 246 KCEFCNTHFYDDDELFKHCR----EKHERCYICDQVAGRPTH 283
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 25.8 bits (54), Expect = 5.3
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 145 YECEVCLRRFARSDMLTRHARLHSGLK 171
Y CEVC +R+ + L H R HS L+
Sbjct: 399 YRCEVCSKRYKNLNGLKYH-RTHSHLQ 424
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 5.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 110 TYTCETCGQTFTMHDR 125
TYTCE C Q T+ +R
Sbjct: 537 TYTCEECEQKITLSER 552
>SPBC12D12.02c |cdm1||DNA polymerase delta subunit
Cdm1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 98 VKHEQPSPAPEITYTCETCGQTFTMHDRLAKHI 130
V EQ SP P++T T +T + D L+K +
Sbjct: 38 VSSEQ-SPTPDVTITTKTLDERIKEDDELSKEV 69
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 137 RTPEAARLYECEVCLRRFARSDMLTRHARLHSGLKPYSCSAC 178
R PEA + ECE+C + M +L + K + C C
Sbjct: 1177 RQPEAGMMIECELCHEWYHAKCMKMSKKKLRADEK-FICPIC 1217
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.131 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,141,556
Number of Sequences: 5004
Number of extensions: 48771
Number of successful extensions: 225
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 137
Number of HSP's gapped (non-prelim): 65
length of query: 230
length of database: 2,362,478
effective HSP length: 70
effective length of query: 160
effective length of database: 2,012,198
effective search space: 321951680
effective search space used: 321951680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)
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