Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002089-TA|BGIBMGA002089-PA|undefined
(181 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 32 0.043
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.53
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 27 1.2
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 27 2.1
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 27 2.1
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 27 2.1
SPAC926.08c |||Brix doamin protein Rpf2 |Schizosaccharomyces pom... 26 2.8
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 26 2.8
SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|c... 26 2.8
SPBC56F2.03 |||actin-like protein Arp10 |Schizosaccharomyces pom... 26 3.8
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 26 3.8
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 26 3.8
SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 25 5.0
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 6.6
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 8.7
SPBC3B9.01 |||Hsp70 nucleotide exchange factor |Schizosaccharomy... 25 8.7
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 32.3 bits (70), Expect = 0.043
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 54 IAREARLVEQGLLDPETLKKSPKKRVRTKGKIEVDEYDLQVIRRKIHEFYAFKKEVPTIN 113
+A +A +V+Q +L+PE L K K RT+ K V++ + +K + FK+ IN
Sbjct: 1 MAEDAPVVQQTMLEPEVLLKKRKVNERTR-KERVEQAIAKKEAQKKNRKETFKRAETFIN 59
Query: 114 KLLQILKEEINFKGS 128
Q +E I S
Sbjct: 60 NYRQRERERIRLNRS 74
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.7 bits (61), Expect = 0.53
Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 15 KVKEFMDEEKRMQVPIIPLSKVYVRVSAATGVSERTVLNIAREA----RLVEQGLLDPET 70
K++E E +++ + PL + A G + LN+ +E +L Q +L+
Sbjct: 1289 KIQELEKEVEKLNASLNPLQTEINELKAEIGAKTAS-LNLMKEYNSRWKLRFQSVLNKYE 1347
Query: 71 LKKSPKKRVRTKGKIEVDEYDLQVIRRKIHEFY----AFKKEVPTINKLLQILKEEINFK 126
+ P + K E E + Q + K+ E FK++V ++N+ ++ LK+E+
Sbjct: 1348 -RVDPTQLEELKKNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQA 1406
Query: 127 GSRET 131
++ T
Sbjct: 1407 NTKNT 1411
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 27.5 bits (58), Expect = 1.2
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 106 KKEVPTINKLLQILKEEINFK-GSRETLRKILRK-NGFQFRKTKNNKDKE 153
+KE+P + K++Q + + N +R+T + R+ +QFR KNNKD +
Sbjct: 632 RKEIPRVYKIIQ--QNQYNRSTNARKTSQLCGREARRWQFRTIKNNKDMQ 679
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 26.6 bits (56), Expect = 2.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 144 RKTKNNKDKEQAPQQPTSVPPMVPPYIHTMFS 175
+K KNNK K++ ++ P+ P Y+ ++F+
Sbjct: 440 KKKKNNKKKKKNKRKNIKPGPLGPAYVPSLFT 471
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 4 NITSEVREIILKVKEFMDEEKRMQVPIIPLSKVYVRVSAATGVSER 49
NI+S++RE+ K+ E + + + ++ AA+G++ER
Sbjct: 564 NISSQLRELHTKIDELRETVSNFRADYNSIRTSLNQLEAASGINER 609
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 990
Score = 26.6 bits (56), Expect = 2.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 104 AFKKEVPTINKLLQILKEEINFKGSRETLRKILRKNGFQFRKTKN 148
A + +P ++ +L LK + NF +R L + L + GF R N
Sbjct: 906 ASRSSLPLLSDILGKLKAQ-NFSATRACLTQSLEEEGFPSRNVSN 949
>SPAC926.08c |||Brix doamin protein Rpf2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 2.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 57 EARLVEQGLLDPETLKKSPKKRV------RTKGKIEVDEYDL 92
E+ ++E+ L P+T + PKK V G+I VD+ DL
Sbjct: 238 ESDVLEEALKKPKTQEPKPKKNVDVDIIGNKVGRIHVDQQDL 279
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 26.2 bits (55), Expect = 2.8
Identities = 17/81 (20%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 102 FYAFKKEVPTINKLLQILKEEINFKGSRET---LRKILRKNGFQFRKTKNNKDKEQAPQQ 158
+YA + V + K ++ + + +F +E L + G +KT ++ A ++
Sbjct: 757 YYAHESGVRNLKKSIEKIFRKTSFSIVKEIDDELNSKEKSTGKSGKKTSPQSSEDAANKE 816
Query: 159 PTSVPPMVPPYIHTMFSHKSI 179
+SVP VP ++ K +
Sbjct: 817 ASSVPLKVPDKVNIEIEEKDL 837
>SPBC25B2.09c |||arginine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 26.2 bits (55), Expect = 2.8
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 17 KEFMDEEKRMQVPIIPLSKVYVRVSAATGVSERTVLNIAREARLVEQGLLDPETLKKSPK 76
K++ DE++ PI L VYV+V+A + + EA +GL L K
Sbjct: 202 KKYGDEDQLKSNPIRHLYDVYVKVNADATEEDEKIQKDKAEAE--SKGLPYTPPLSLHDK 259
Query: 77 KRVRTKGKIEVDEYDLQVIRR 97
R K + DE L+V R
Sbjct: 260 AREFFKRMEDGDEESLKVWAR 280
>SPBC56F2.03 |||actin-like protein Arp10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 5 ITSEVREIILKVKEFMDEEKRMQVPIIPLSKVYVRVSAATGVSERTVLN 53
+ ++ E + + D+E +V ++P + +V +S T + +R LN
Sbjct: 10 VVVQIDEFGIYIGNASDKEPTWKVDLVPYKQSWVPISIVTTIIQRYCLN 58
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 25.8 bits (54), Expect = 3.8
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 76 KKRVRTKGKIEVDEYDLQVIRRKIHEFYAFKKE---VPTINKLLQIL-KEEINFKGSRET 131
K+ V T + VD ++ + +R Y FKK+ +P I + Q+L + + + T
Sbjct: 120 KRYVETNPDVPVDSFNAEKMRNFQANTYFFKKKEDLIPFIEEHWQLLCPDREKVQTWQAT 179
Query: 132 LRKILRKNGFQFR---KTKNNKDKEQAPQQP 159
L L N +R +T N++ E A P
Sbjct: 180 LGSCLVANRDTYRAKDETMRNQNSEYALNNP 210
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 25.8 bits (54), Expect = 3.8
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 92 LQVIRRKIHEFYAFKKEVPTIN-KLLQILKEE 122
LQ I RKI+ FY +VPT + +LL+ K++
Sbjct: 1622 LQTILRKIYNFYYALYDVPTTDVELLKRTKDD 1653
>SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 649
Score = 25.4 bits (53), Expect = 5.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 24 KRMQVPIIPLSKVYVRVSAATGVSERTVLNIARE 57
+RM +P++PL V++R S T R+ ++ +E
Sbjct: 476 RRMGLPVLPLVCVFIRTSMQTWSMFRSTHSMKQE 509
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.0 bits (52), Expect = 6.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 94 VIRRKIHEFYAFKKEVPTINKLLQILKEEINFKGSRETLRK 134
+I R+ F +E+ +N L + LK E+N + LRK
Sbjct: 725 IISRQDQRASKFAEELLHVNSLAERLKGELNASKGEKDLRK 765
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 24.6 bits (51), Expect = 8.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 47 SERTVLNIAREARLVEQGLLDPETL 71
+ RTVLN+ +E ++ LDP +L
Sbjct: 27 TNRTVLNLPKEILIIIFSFLDPRSL 51
>SPBC3B9.01 |||Hsp70 nucleotide exchange factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 287
Score = 24.6 bits (51), Expect = 8.7
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 91 DLQVIRRKIHEFYAFKKEVPTINKLLQILKEEINFK 126
D + + +H Y F+K ++ ++LK + FK
Sbjct: 232 DEDCVTKSLHTLYLFQKNKVSVANTNELLKSLVQFK 267
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.133 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,700
Number of Sequences: 5004
Number of extensions: 34305
Number of successful extensions: 143
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 133
Number of HSP's gapped (non-prelim): 18
length of query: 181
length of database: 2,362,478
effective HSP length: 69
effective length of query: 112
effective length of database: 2,017,202
effective search space: 225926624
effective search space used: 225926624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)
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