GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002089-TA|BGIBMGA002089-PA|undefined
         (181 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           28   0.15 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    28   0.15 
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    26   0.59 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   0.78 
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    25   1.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   4.2  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 28.3 bits (60), Expect = 0.15
 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 42  AATGVSERTVLNIAREARLVEQGLLDPETLKKSPKKRVRTKGKIEVDEYDLQVIR 96
           AATG S  T  ++      + QGL+D   L   PK R    GKI     +LQ+++
Sbjct: 433 AATGSSTTTTNHVTNNIPDLPQGLMDSADL--LPKYRSDLVGKIRALRQELQLLQ 485


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 28.3 bits (60), Expect = 0.15
 Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 9/73 (12%)

Query: 57  EARLVEQGLLDPETLKKSPKKRV--------RTKGKIEVDEYDLQVIRRKIHEFYAFKKE 108
           E  L+ QG+ +P +++   K  V        +T+ K+++  ++++   +       FK+E
Sbjct: 346 EMELISQGIAEPNSVRVLDKASVPIVKLTDRQTQVKVDIS-FNMESGVQSAKLIKGFKRE 404

Query: 109 VPTINKLLQILKE 121
            P + KL+ +LK+
Sbjct: 405 YPVLEKLVLVLKQ 417


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 26.2 bits (55), Expect = 0.59
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 5/49 (10%)

Query: 64  GLLDPETLKKSPKKRVRTKGKIEVDEYD-LQVIRRKIHEFYAFKKEVPT 111
           G++ P T+   PKK +   GK+    YD  ++    +H+F+  K++V T
Sbjct: 322 GIVAPTTIPTVPKKSLAEVGKV----YDRCELANDLLHKFHLPKEQVAT 366


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 0.78
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 137 RKNGFQFRKTKNNKDKEQAPQQPTSVPPMVPPYIHTMFS 175
           R  G    K ++ + +  +PQ P  +P + PP  +T+ S
Sbjct: 299 RGGGVDAAKKQHQQQQRSSPQPPEKMPRLNPPSSNTIQS 337


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 85  IEVDEYDLQVIRRKIHEFYAFKKEVPT 111
           +++D+YD  V R K     AF+K+VP+
Sbjct: 83  LKLDDYDDLVYRYKDISKIAFRKDVPS 109


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query: 76   KKRVRTKGKIEVDEYDLQ 93
            K+R R K + +VD +DLQ
Sbjct: 1796 KERARAKRREDVDRFDLQ 1813


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.133    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,368
Number of Sequences: 2123
Number of extensions: 6482
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 6
length of query: 181
length of database: 516,269
effective HSP length: 60
effective length of query: 121
effective length of database: 388,889
effective search space: 47055569
effective search space used: 47055569
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)