Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002088-TA|BGIBMGA002088-PA|IPR001993|Mitochondrial
substrate carrier, IPR002067|Mitochondrial carrier protein
(317 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 56 3e-10
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 56 3e-10
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 26 0.50
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 56.4 bits (130), Expect = 3e-10
Identities = 44/202 (21%), Positives = 96/202 (47%), Gaps = 25/202 (12%)
Query: 115 FMCGVLAGGSTALLVSPLEVIRV--------RQMLNKSQYKGIINGAREVYKTRGILSFY 166
F+ G +A + V+P+E +++ +Q+ + +YKG+I+ + K +G LS++
Sbjct: 14 FLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYW 73
Query: 167 EGVNASLLQMGPSVGIGFAVFNFVQPLVLARMHNCDRGHCKSGRHHYNPEHVLLASTIAG 226
G A++++ P+ + FA + + + L + + + R+ + + +G
Sbjct: 74 RGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDK----NTQFLRY-------FVGNLASG 122
Query: 227 SASGFVSKSVTYPFDLAKRRMQISSYRSVNQPVSKELMKCTSLSDCLVNMYREDGIRGMF 286
A+G S YP D A+ R+ ++ + + T L +CL +++ DGI G++
Sbjct: 123 GAAGATSLCFVYPLDFARTRLAADVGKAGGE------REFTGLGNCLTKIFKADGITGLY 176
Query: 287 RGWKITIYKAQITSIVSFTSYE 308
RG+ +++ I F Y+
Sbjct: 177 RGFGVSVQGIIIYRAAYFGFYD 198
Score = 49.2 bits (112), Expect = 5e-08
Identities = 64/295 (21%), Positives = 128/295 (43%), Gaps = 39/295 (13%)
Query: 8 DTLTSNQKLISGCVSGFMTRFITQPLDVVKLREQLKSPAVRAADQKEW---FKATRKIFK 64
D + + ++G V+ +++ P++ VKL Q++ + + ++++ + +I K
Sbjct: 6 DPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPK 65
Query: 65 NEGITAFWQGHNVGQIHSMISLTCQFFVYEVSTKAVAVSNVHNRYKPFLVFMCGVLAGGS 124
+G ++W+G N+ + F ++ K V + V ++ FL + G LA G
Sbjct: 66 EQGFLSYWRG-NLANVIRYFPTQALNFAFKDKYKQVFLGGV-DKNTQFLRYFVGNLASGG 123
Query: 125 TA-----LLVSPLEVIRVRQMLN------KSQYKGIINGAREVYKTRGILSFYEGVNASL 173
A V PL+ R R + + ++ G+ N +++K GI Y G S+
Sbjct: 124 AAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSV 183
Query: 174 LQMGPSVGIGFAVFNFVQPLVLARMHNCDRGHCKSGRHHYNPEHVLLASTIAGSASGFVS 233
+ + A F F ++ RG + P L++ IA + V+
Sbjct: 184 QGI---IIYRAAYFGF---------YDTARGMLPDPKK--TP--FLISWGIAQVVTT-VA 226
Query: 234 KSVTYPFDLAKRRMQISSYRSVNQPVSKELMKCTSLSDCLVNMYREDGIRGMFRG 288
V+YPFD +RRM + S R+ ++ + K + C + +Y+ +G F+G
Sbjct: 227 GIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWA------TIYKTEGGNAFFKG 275
Score = 44.0 bits (99), Expect = 2e-06
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 16 LISGCVSGFMTRFITQPLDVVKLREQLKSPAVRAADQKEWF---KATRKIFKNEGITAFW 72
L SG +G + PLD + R L + +A ++E+ KIFK +GIT +
Sbjct: 119 LASGGAAGATSLCFVYPLDFARTR--LAADVGKAGGEREFTGLGNCLTKIFKADGITGLY 176
Query: 73 QGHNVGQIHSMISLTCQFFVYEVSTKAVAVSNVHNRYKPFLVFMCGVLAGGSTALLVS-P 131
+G V + +I +F + + + + + PFL+ + A +VS P
Sbjct: 177 RGFGV-SVQGIIIYRAAYFGFYDTARGMLPD---PKKTPFLISWGIAQVVTTVAGIVSYP 232
Query: 132 LEVIRVRQMLN----KSQ--YKGIINGAREVYKTRGILSFYEGVNASLLQ 175
+ +R R M+ KS+ YK ++ +YKT G +F++G +++L+
Sbjct: 233 FDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 56.4 bits (130), Expect = 3e-10
Identities = 44/202 (21%), Positives = 96/202 (47%), Gaps = 25/202 (12%)
Query: 115 FMCGVLAGGSTALLVSPLEVIRV--------RQMLNKSQYKGIINGAREVYKTRGILSFY 166
F+ G +A + V+P+E +++ +Q+ + +YKG+I+ + K +G LS++
Sbjct: 14 FLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYW 73
Query: 167 EGVNASLLQMGPSVGIGFAVFNFVQPLVLARMHNCDRGHCKSGRHHYNPEHVLLASTIAG 226
G A++++ P+ + FA + + + L + + + R+ + + +G
Sbjct: 74 RGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDK----NTQFLRY-------FVGNLASG 122
Query: 227 SASGFVSKSVTYPFDLAKRRMQISSYRSVNQPVSKELMKCTSLSDCLVNMYREDGIRGMF 286
A+G S YP D A+ R+ ++ + + T L +CL +++ DGI G++
Sbjct: 123 GAAGATSLCFVYPLDFARTRLAADVGKAGGE------REFTGLGNCLTKIFKADGITGLY 176
Query: 287 RGWKITIYKAQITSIVSFTSYE 308
RG+ +++ I F Y+
Sbjct: 177 RGFGVSVQGIIIYRAAYFGFYD 198
Score = 49.2 bits (112), Expect = 5e-08
Identities = 64/295 (21%), Positives = 128/295 (43%), Gaps = 39/295 (13%)
Query: 8 DTLTSNQKLISGCVSGFMTRFITQPLDVVKLREQLKSPAVRAADQKEW---FKATRKIFK 64
D + + ++G V+ +++ P++ VKL Q++ + + ++++ + +I K
Sbjct: 6 DPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPK 65
Query: 65 NEGITAFWQGHNVGQIHSMISLTCQFFVYEVSTKAVAVSNVHNRYKPFLVFMCGVLAGGS 124
+G ++W+G N+ + F ++ K V + V ++ FL + G LA G
Sbjct: 66 EQGFLSYWRG-NLANVIRYFPTQALNFAFKDKYKQVFLGGV-DKNTQFLRYFVGNLASGG 123
Query: 125 TA-----LLVSPLEVIRVRQMLN------KSQYKGIINGAREVYKTRGILSFYEGVNASL 173
A V PL+ R R + + ++ G+ N +++K GI Y G S+
Sbjct: 124 AAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSV 183
Query: 174 LQMGPSVGIGFAVFNFVQPLVLARMHNCDRGHCKSGRHHYNPEHVLLASTIAGSASGFVS 233
+ + A F F ++ RG + P L++ IA + V+
Sbjct: 184 QGI---IIYRAAYFGF---------YDTARGMLPDPKK--TP--FLISWGIAQVVTT-VA 226
Query: 234 KSVTYPFDLAKRRMQISSYRSVNQPVSKELMKCTSLSDCLVNMYREDGIRGMFRG 288
V+YPFD +RRM + S R+ ++ + K + C + +Y+ +G F+G
Sbjct: 227 GIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWA------TIYKTEGGNAFFKG 275
Score = 44.0 bits (99), Expect = 2e-06
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
Query: 16 LISGCVSGFMTRFITQPLDVVKLREQLKSPAVRAADQKEWF---KATRKIFKNEGITAFW 72
L SG +G + PLD + R L + +A ++E+ KIFK +GIT +
Sbjct: 119 LASGGAAGATSLCFVYPLDFARTR--LAADVGKAGGEREFTGLGNCLTKIFKADGITGLY 176
Query: 73 QGHNVGQIHSMISLTCQFFVYEVSTKAVAVSNVHNRYKPFLVFMCGVLAGGSTALLVS-P 131
+G V + +I +F + + + + + PFL+ + A +VS P
Sbjct: 177 RGFGV-SVQGIIIYRAAYFGFYDTARGMLPD---PKKTPFLISWGIAQVVTTVAGIVSYP 232
Query: 132 LEVIRVRQMLN----KSQ--YKGIINGAREVYKTRGILSFYEGVNASLLQ 175
+ +R R M+ KS+ YK ++ +YKT G +F++G +++L+
Sbjct: 233 FDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 25.8 bits (54), Expect = 0.50
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 257 QPVSKELMKCTSLSDCLVNMYREDGIRG 284
QP+ K L KC + + NM+R+ + G
Sbjct: 702 QPIGKALSKCHNRNVTTCNMFRKTNLSG 729
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.324 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,613
Number of Sequences: 429
Number of extensions: 3330
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 11
length of query: 317
length of database: 140,377
effective HSP length: 58
effective length of query: 259
effective length of database: 115,495
effective search space: 29913205
effective search space used: 29913205
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)
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