GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002087-TA|BGIBMGA002087-PA|IPR001398|Macrophage
migration inhibitory factor
         (120 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069192-1|AAL39337.1|  734|Drosophila melanogaster GH24787p pro...    27   5.0  
AE014296-1465|AAF50409.1|  734|Drosophila melanogaster CG6745-PA...    27   5.0  

>AY069192-1|AAL39337.1|  734|Drosophila melanogaster GH24787p
           protein.
          Length = 734

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 20/86 (23%), Positives = 37/86 (43%)

Query: 32  QKSPEKFICLISPDCALSIGGESSTPGAVATLESIGNLGPSQNKVIAKEISDFVEKELGI 91
           +++PE  +        + IG        +   +  GN      + IAKE  + +E+ L  
Sbjct: 287 RRTPESILVAARSQRNVHIGNFGFESNTLKLGDLQGNRFRIALRHIAKEKREEIEQALQS 346

Query: 92  SKDRFFLTFYDLKNFNVAKGGITVDV 117
            K+R F+ +Y L+ F  +    T +V
Sbjct: 347 LKERGFINYYGLQRFGNSASVPTYEV 372


>AE014296-1465|AAF50409.1|  734|Drosophila melanogaster CG6745-PA
           protein.
          Length = 734

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 20/86 (23%), Positives = 37/86 (43%)

Query: 32  QKSPEKFICLISPDCALSIGGESSTPGAVATLESIGNLGPSQNKVIAKEISDFVEKELGI 91
           +++PE  +        + IG        +   +  GN      + IAKE  + +E+ L  
Sbjct: 287 RRTPESILVAARSQRNVHIGNFGFESNTLKLGDLQGNRFRIALRHIAKEKREEIEQALQS 346

Query: 92  SKDRFFLTFYDLKNFNVAKGGITVDV 117
            K+R F+ +Y L+ F  +    T +V
Sbjct: 347 LKERGFINYYGLQRFGNSASVPTYEV 372


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.318    0.138    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,475,925
Number of Sequences: 52641
Number of extensions: 196020
Number of successful extensions: 505
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 503
Number of HSP's gapped (non-prelim): 2
length of query: 120
length of database: 24,830,863
effective HSP length: 76
effective length of query: 44
effective length of database: 20,830,147
effective search space: 916526468
effective search space used: 916526468
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)