GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002087-TA|BGIBMGA002087-PA|IPR001398|Macrophage
migration inhibitory factor
         (120 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    26   0.10 
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    26   0.10 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   3.9  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   5.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   8.9  

>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 26.2 bits (55), Expect = 0.10
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 11  TNSFIPNDFVNKIIPVLSKAVQKSPEKFICLISP---DCAL 48
           T    P+DF   +  ++ + V K+ ++  C+++    DCAL
Sbjct: 80  TRELTPDDFTEDVHEIIEQCVSKAADEDECMVARKYIDCAL 120


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 26.2 bits (55), Expect = 0.10
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 11  TNSFIPNDFVNKIIPVLSKAVQKSPEKFICLISP---DCAL 48
           T    P+DF   +  ++ + V K+ ++  C+++    DCAL
Sbjct: 80  TRELTPDDFTEDVHEIIEQCVSKAADEDECMVARKYIDCAL 120


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 93  KDRFFLTFYDLKNFNV 108
           KD FFL   DL+N ++
Sbjct: 356 KDLFFLQILDLRNNSI 371


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/24 (33%), Positives = 16/24 (66%)

Query: 70 GPSQNKVIAKEISDFVEKELGISK 93
          G + N+V+ +EI++    E G++K
Sbjct: 76 GGNFNEVVIREIAEIFLDENGVNK 99


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 72  SQNKVIAKEISDFVEKELGISKDRFFL 98
           S+ +++ +   DFV K     KDR +L
Sbjct: 415 SEKRIMGEADCDFVVKLFKTFKDRKYL 441


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.138    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,752
Number of Sequences: 429
Number of extensions: 1263
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 120
length of database: 140,377
effective HSP length: 51
effective length of query: 69
effective length of database: 118,498
effective search space:  8176362
effective search space used:  8176362
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)