Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002086-TA|BGIBMGA002086-PA|undefined
(79 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62040.1 68416.m06969 haloacid dehalogenase-like hydrolase fa... 28 0.90
At1g58190.1 68414.m06605 leucine-rich repeat family protein cont... 27 1.2
At5g21930.1 68418.m02545 ATPase E1-E2 type family protein / halo... 27 2.1
At5g03560.1 68418.m00314 expressed protein 26 3.6
At5g67130.1 68418.m08463 expressed protein 25 4.8
At4g29560.1 68417.m04215 expressed protein 25 4.8
At4g17250.1 68417.m02594 expressed protein 25 4.8
At5g55540.1 68418.m06919 expressed protein 25 6.3
At2g34970.1 68415.m04291 eIF4-gamma/eIF5/eIF2-epsilon domain-con... 25 6.3
At1g74360.1 68414.m08615 leucine-rich repeat transmembrane prote... 25 6.3
At1g61750.1 68414.m06964 expressed protein contains Pfam profile... 25 6.3
At4g23050.2 68417.m03324 protein kinase, putative similar to MAP... 25 8.4
At4g23050.1 68417.m03323 protein kinase, putative similar to MAP... 25 8.4
At2g21850.1 68415.m02596 DC1 domain-containing protein contains ... 25 8.4
>At3g62040.1 68416.m06969 haloacid dehalogenase-like hydrolase
family protein similarity to SP|P53078 SSM1 protein
{Saccharomyces cerevisiae}; contains InterPro accession
IPR005834: Haloacid dehalogenase-like hydrolase
Length = 227
Score = 27.9 bits (59), Expect = 0.90
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 48 LNRSG----FSSVVCVEGINPVPSSGFQIL-KPDLE 78
LNR G F ++C E +NP S QIL KP +E
Sbjct: 102 LNRLGLEDCFEGIICFETLNPSSDSNTQILCKPSVE 137
>At1g58190.1 68414.m06605 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1784
Score = 27.5 bits (58), Expect = 1.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 29 ACLHSSQHLDCSDSTLAGQLNRSG 52
A LH LD SD+T +G L R G
Sbjct: 196 AVLHKLHALDLSDNTFSGSLGREG 219
>At5g21930.1 68418.m02545 ATPase E1-E2 type family protein /
haloacid dehalogenase-like hydrolase family protein /
heavy-metal-associated domain-containing protein
contains InterPro accession IPR001757: ATPase, E1-E2
type; contains Pfam profiles PF00403:
Heavy-metal-associated domain, PF00702: haloacid
dehalogenase-like hydrolase
Length = 883
Score = 26.6 bits (56), Expect = 2.1
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 19 ESPVSHPNNSACLHSSQHLDCSDSTLAGQLNRSGFSSVVCVEG 61
E +HP A ++ ++ L+ GQL GF ++ ++G
Sbjct: 581 EKTATHPIAKAIVNEAESLNLKTPETRGQLTEPGFGTLAEIDG 623
>At5g03560.1 68418.m00314 expressed protein
Length = 241
Score = 25.8 bits (54), Expect = 3.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 31 LHSSQHLDCSDSTLAGQLNRSGFS 54
LH++ H D ++ TL LN++GF+
Sbjct: 137 LHTNPHADPAEDTLYRILNKNGFA 160
>At5g67130.1 68418.m08463 expressed protein
Length = 426
Score = 25.4 bits (53), Expect = 4.8
Identities = 18/60 (30%), Positives = 21/60 (35%)
Query: 9 LLEYSLHFCYESPVSHPNNSACLHSSQHLDCSDSTLAGQLNRSGFSSVVCVEGINPVPSS 68
LL L F + S S+ N S DC G G S VC G P+S
Sbjct: 16 LLLLLLSFSFSSACSNGNCQLLDSCSSATDCVSGLYCGDCPAVGRSKPVCTRGQATSPTS 75
>At4g29560.1 68417.m04215 expressed protein
Length = 493
Score = 25.4 bits (53), Expect = 4.8
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 19 ESPVSHPNNSACLHSSQHLDCSDSTLAGQLNRSGFSSVV---CVEGINPV 65
+SP S L + +L S S+ A +NRS F S++ C + +PV
Sbjct: 13 KSPSPEAEASLWLDQASNLFSSSSSAAAPINRSSFVSLLKKQCDQNSSPV 62
>At4g17250.1 68417.m02594 expressed protein
Length = 416
Score = 25.4 bits (53), Expect = 4.8
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 28 SACLHSSQHLDCSDSTLAGQLNRSGFSSVVCVEGINPVPSSGFQI 72
S C+ S L+ S + QL + S VC N +PS G+ +
Sbjct: 67 SVCVKLSLDLNTSMPSRQDQLAKLSSSVFVCTVMANSMPSLGYMV 111
>At5g55540.1 68418.m06919 expressed protein
Length = 1380
Score = 25.0 bits (52), Expect = 6.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 26 NNSACLHSSQHLDCSDST 43
N C++S +HL C DS+
Sbjct: 893 NTHDCVYSGRHLQCDDSS 910
>At2g34970.1 68415.m04291 eIF4-gamma/eIF5/eIF2-epsilon
domain-containing protein similar to SP|Q64350
Translation initiation factor eIF-2B epsilon subunit
(eIF-2B GDP-GTP exchange factor) {Rattus norvegicus};
contains Pfam profile PF02020:
eIF4-gamma/eIF5/eIF2-epsilon
Length = 730
Score = 25.0 bits (52), Expect = 6.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 2 IFRTKHKLLEYSLHFCYESPVSHPNNSACLHSSQHLDCSDSTL 44
+F L + LH+ E + HP+ S CL S LD + S L
Sbjct: 188 LFIAVDPLTKQLLHY-EEDKIDHPSGSVCLEKSL-LDTNPSVL 228
>At1g74360.1 68414.m08615 leucine-rich repeat transmembrane protein
kinase, putative similar to brassinosteroid insensitive
1 GB:AAC49810 (putative receptor protein kinase);
contains Pfam profiles: PF00560 Leucine Rich Repeat (17
repeats), PF00069 Eukaryotic protein kinase domain
Length = 1106
Score = 25.0 bits (52), Expect = 6.3
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 25 PNNSACLHSSQHLDCSDSTLAGQLNRSGFSSV 56
P++ + H+ +HL+ S + L G+L+ G S++
Sbjct: 128 PDDLSRCHNLKHLNLSHNILEGELSLPGLSNL 159
>At1g61750.1 68414.m06964 expressed protein contains Pfam profile:
PF01657 domain of unknown function
Length = 352
Score = 25.0 bits (52), Expect = 6.3
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 1 MIFRTKHKLLEYSLHFCYESPVSHPNNSACLHSSQHLDCSDSTLAGQLNRSGFSS 55
++ +T + Y L +CY S PN+S +LD S L Q + GF S
Sbjct: 18 LLIKTLNAQPTYLLSYCYTSGNYTPNSS----YKSNLDTLISVLDSQSSNKGFYS 68
>At4g23050.2 68417.m03324 protein kinase, putative similar to MAP3K
delta-1 protein kinase [Arabidopsis thaliana]
gi|2253010|emb|CAA74591; contains Pfam PF00069 Protein
kinase domain and PF00989 PAS domain
Length = 736
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 19 ESPVSHPNNSACLHSSQHLDCSDSTLAGQLNRSGFSSV 56
+SPV+ NN SS + D L ++ R F++V
Sbjct: 445 QSPVNQRNNRLVTDSSCEIRWEDLQLGEEVGRGSFAAV 482
>At4g23050.1 68417.m03323 protein kinase, putative similar to MAP3K
delta-1 protein kinase [Arabidopsis thaliana]
gi|2253010|emb|CAA74591; contains Pfam PF00069 Protein
kinase domain and PF00989 PAS domain
Length = 735
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 19 ESPVSHPNNSACLHSSQHLDCSDSTLAGQLNRSGFSSV 56
+SPV+ NN SS + D L ++ R F++V
Sbjct: 444 QSPVNQRNNRLVTDSSCEIRWEDLQLGEEVGRGSFAAV 481
>At2g21850.1 68415.m02596 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 772
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 15 HFCYESPVSHPNNSACLHSSQHLDCSDSTLAGQLNRS 51
H C ES P HL C DS L G +++S
Sbjct: 199 HICGESIAGVPFGCLECDFDAHLRCLDSFLRGLMHKS 235
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.134 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,129,711
Number of Sequences: 28952
Number of extensions: 74411
Number of successful extensions: 185
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 175
Number of HSP's gapped (non-prelim): 14
length of query: 79
length of database: 12,070,560
effective HSP length: 58
effective length of query: 21
effective length of database: 10,391,344
effective search space: 218218224
effective search space used: 218218224
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)
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