Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002084-TA|BGIBMGA002084-PA|IPR003323|Ovarian tumour,
otubain
(135 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003803-1|AAO41486.1| 499|Drosophila melanogaster AT23158p pro... 48 6e-06
AY128464-1|AAM75057.1| 659|Drosophila melanogaster RE19005p pro... 48 6e-06
AY060958-1|AAL28506.1| 568|Drosophila melanogaster GM08907p pro... 48 6e-06
AE014134-765|AAF50988.1| 495|Drosophila melanogaster CG3251-PA ... 38 0.006
AE014296-1985|AAN11877.1| 489|Drosophila melanogaster CG6091-PB... 36 0.018
AE014296-1984|AAN11876.1| 649|Drosophila melanogaster CG6091-PC... 36 0.018
AE014296-1983|AAF50041.1| 649|Drosophila melanogaster CG6091-PA... 36 0.018
AY118809-1|AAM50669.1| 404|Drosophila melanogaster GH21935p pro... 29 2.1
AF027300-1|AAB84112.1| 404|Drosophila melanogaster positive tra... 29 2.1
AE013599-3421|AAF46868.1| 404|Drosophila melanogaster CG5179-PA... 29 2.1
AY094756-1|AAM11109.1| 154|Drosophila melanogaster GM07843p pro... 28 3.7
AY071373-1|AAL48995.1| 422|Drosophila melanogaster RE40293p pro... 28 3.7
AE014296-3268|AAN11645.1| 406|Drosophila melanogaster CG7668-PB... 28 3.7
AE014296-3267|AAF49079.2| 422|Drosophila melanogaster CG7668-PA... 28 3.7
AY051622-1|AAK93046.1| 456|Drosophila melanogaster GH27042p pro... 28 4.9
AE014298-950|AAF46198.2| 456|Drosophila melanogaster CG3135-PA ... 28 4.9
AY061564-1|AAL29112.1| 374|Drosophila melanogaster LP11612p pro... 27 8.5
AE014296-2405|AAF49721.2| 374|Drosophila melanogaster CG4914-PA... 27 8.5
>BT003803-1|AAO41486.1| 499|Drosophila melanogaster AT23158p
protein.
Length = 499
Score = 47.6 bits (108), Expect = 6e-06
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 7 PIRGDGNCLFRSISYCVYGTQERHREIRNLVVDNIVANWYRYKDFIVGD-RSYVYEIRNA 65
P+ DG CLFRSIS +YG +E H IR +D I N + F+ D SY+
Sbjct: 60 PVEEDGACLFRSISLQIYGDEEMHDVIRQHTMDYIHENREYFGQFVTEDINSYI------ 113
Query: 66 TDYSRIMSRDGEFAGHAELHCVSELF 91
R +RD H E+ +SE++
Sbjct: 114 ---QRKRARDAH-GNHIEIQAISEIY 135
>AY128464-1|AAM75057.1| 659|Drosophila melanogaster RE19005p
protein.
Length = 659
Score = 47.6 bits (108), Expect = 6e-06
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 7 PIRGDGNCLFRSISYCVYGTQERHREIRNLVVDNIVANWYRYKDFIVGD-RSYVYEIRNA 65
P+ DG CLFRSIS +YG +E H IR +D I N + F+ D SY+
Sbjct: 220 PVEEDGACLFRSISLQIYGDEEMHDVIRQHTMDYIHENREYFGQFVTEDINSYI------ 273
Query: 66 TDYSRIMSRDGEFAGHAELHCVSELF 91
R +RD H E+ +SE++
Sbjct: 274 ---QRKRARDAH-GNHIEIQAISEIY 295
>AY060958-1|AAL28506.1| 568|Drosophila melanogaster GM08907p
protein.
Length = 568
Score = 47.6 bits (108), Expect = 6e-06
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 7 PIRGDGNCLFRSISYCVYGTQERHREIRNLVVDNIVANWYRYKDFIVGD-RSYVYEIRNA 65
P+ DG CLFRSIS +YG +E H IR +D I N + F+ D SY+
Sbjct: 220 PVEEDGACLFRSISLQIYGDEEMHDVIRQHTMDYIHENREYFGQFVTEDINSYI------ 273
Query: 66 TDYSRIMSRDGEFAGHAELHCVSELF 91
R +RD H E+ +SE++
Sbjct: 274 ---QRKRARDAH-GNHIEIQAISEIY 295
>AE014134-765|AAF50988.1| 495|Drosophila melanogaster CG3251-PA
protein.
Length = 495
Score = 37.5 bits (83), Expect = 0.006
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 10 GDGNCLFRSISYCVYGTQERHREIRNLVVDNIVANWYRYKDFIVGD 55
GD + LFR ++ VY TQ H E+R V + W ++ F+ GD
Sbjct: 36 GDASSLFRVVAEQVYDTQMLHYEVRMECVRYMFTKWKTFRRFVSGD 81
>AE014296-1985|AAN11877.1| 489|Drosophila melanogaster CG6091-PB,
isoform B protein.
Length = 489
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 7 PIRGDGNCLFRSISYCVYGTQERH 30
P+ DG CLFRSIS +YG +E H
Sbjct: 60 PVEEDGACLFRSISLQIYGDEEMH 83
>AE014296-1984|AAN11876.1| 649|Drosophila melanogaster CG6091-PC,
isoform C protein.
Length = 649
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 7 PIRGDGNCLFRSISYCVYGTQERH 30
P+ DG CLFRSIS +YG +E H
Sbjct: 220 PVEEDGACLFRSISLQIYGDEEMH 243
>AE014296-1983|AAF50041.1| 649|Drosophila melanogaster CG6091-PA,
isoform A protein.
Length = 649
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 7 PIRGDGNCLFRSISYCVYGTQERH 30
P+ DG CLFRSIS +YG +E H
Sbjct: 220 PVEEDGACLFRSISLQIYGDEEMH 243
>AY118809-1|AAM50669.1| 404|Drosophila melanogaster GH21935p
protein.
Length = 404
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 32 EIRNLVVDNIVANWYRYKDFIVGDRSY 58
E +N + +V WYR + ++GDR+Y
Sbjct: 212 ESKNRYTNRVVTLWYRPPELLLGDRNY 238
>AF027300-1|AAB84112.1| 404|Drosophila melanogaster positive
transcription elongationfactor b small subunit protein.
Length = 404
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 32 EIRNLVVDNIVANWYRYKDFIVGDRSY 58
E +N + +V WYR + ++GDR+Y
Sbjct: 212 ESKNRYTNRVVTLWYRPPELLLGDRNY 238
>AE013599-3421|AAF46868.1| 404|Drosophila melanogaster CG5179-PA
protein.
Length = 404
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 32 EIRNLVVDNIVANWYRYKDFIVGDRSY 58
E +N + +V WYR + ++GDR+Y
Sbjct: 212 ESKNRYTNRVVTLWYRPPELLLGDRNY 238
>AY094756-1|AAM11109.1| 154|Drosophila melanogaster GM07843p
protein.
Length = 154
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 26 TQERHREIRNLVVDNIVANWY-RYKDFIVGDRSYVYEIRNATDYS 69
T R E+ +VD A+ Y RY +F++GD Y++ + +YS
Sbjct: 34 TTHRRMELYIQLVDFDNASAYARYDNFVIGDEKQKYKLLSLGEYS 78
>AY071373-1|AAL48995.1| 422|Drosophila melanogaster RE40293p
protein.
Length = 422
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 26 TQERHREIRNLVVDNIVANWY-RYKDFIVGDRSYVYEIRNATDYS 69
T R E+ +VD A+ Y RY +F++GD Y++ + +YS
Sbjct: 302 TTHRRMELYIQLVDFDNASAYARYDNFVIGDEKQKYKLLSLGEYS 346
>AE014296-3268|AAN11645.1| 406|Drosophila melanogaster CG7668-PB,
isoform B protein.
Length = 406
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 26 TQERHREIRNLVVDNIVANWY-RYKDFIVGDRSYVYEIRNATDYS 69
T R E+ +VD A+ Y RY +F++GD Y++ + +YS
Sbjct: 286 TTHRRMELYIQLVDFDNASAYARYDNFVIGDEKQKYKLLSLGEYS 330
>AE014296-3267|AAF49079.2| 422|Drosophila melanogaster CG7668-PA,
isoform A protein.
Length = 422
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 26 TQERHREIRNLVVDNIVANWY-RYKDFIVGDRSYVYEIRNATDYS 69
T R E+ +VD A+ Y RY +F++GD Y++ + +YS
Sbjct: 302 TTHRRMELYIQLVDFDNASAYARYDNFVIGDEKQKYKLLSLGEYS 346
>AY051622-1|AAK93046.1| 456|Drosophila melanogaster GH27042p
protein.
Length = 456
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 2 SKRVIPIRGDGNCLFRSISYCVYGTQERHREI 33
SK VIP + +G C+ ++ C G + H EI
Sbjct: 377 SKCVIPCKNEGRCIGNNLCRCPNGLRGDHCEI 408
>AE014298-950|AAF46198.2| 456|Drosophila melanogaster CG3135-PA
protein.
Length = 456
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 2 SKRVIPIRGDGNCLFRSISYCVYGTQERHREI 33
SK VIP + +G C+ ++ C G + H EI
Sbjct: 377 SKCVIPCKNEGRCIGNNLCRCPNGLRGDHCEI 408
>AY061564-1|AAL29112.1| 374|Drosophila melanogaster LP11612p
protein.
Length = 374
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 103 CSRTTDYGRGMITKHLLFSGYMDAG 127
C T+Y + MITK+++ SGY G
Sbjct: 282 CVAQTNYTQKMITKNMMCSGYPGVG 306
>AE014296-2405|AAF49721.2| 374|Drosophila melanogaster CG4914-PA
protein.
Length = 374
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 103 CSRTTDYGRGMITKHLLFSGYMDAG 127
C T+Y + MITK+++ SGY G
Sbjct: 282 CVAQTNYTQKMITKNMMCSGYPGVG 306
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.327 0.142 0.445
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,607,149
Number of Sequences: 52641
Number of extensions: 246411
Number of successful extensions: 700
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 686
Number of HSP's gapped (non-prelim): 18
length of query: 135
length of database: 24,830,863
effective HSP length: 78
effective length of query: 57
effective length of database: 20,724,865
effective search space: 1181317305
effective search space used: 1181317305
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 57 (27.1 bits)
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