GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002083-TA|BGIBMGA002083-PA|IPR004000|Actin/actin-like
         (369 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    27   0.16 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   2.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   6.1  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query: 282 DAELRPDLYDAIVLCGGLAMIPGLQE 307
           DA++  D  D IVL GG   IP +Q+
Sbjct: 150 DADMTKDQIDEIVLVGGSTRIPKIQQ 175


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 76  IVHWDNMERIWHHVFYKELKVAPEDRAVVL 105
           +  W N ERI++ +  K+L V   ++ V+L
Sbjct: 159 VTDWVNFERIYYKLTKKKLSVFFGNKPVIL 188


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 3   FEKPAVVIDNGSYNIKAGFACDNHP 27
           +E    +ID G      GF C+N+P
Sbjct: 151 YEPNPSIIDPGPALPPTGFLCNNYP 175


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.137    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,318
Number of Sequences: 317
Number of extensions: 3588
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 3
length of query: 369
length of database: 114,650
effective HSP length: 58
effective length of query: 311
effective length of database: 96,264
effective search space: 29938104
effective search space used: 29938104
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)