Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002083-TA|BGIBMGA002083-PA|IPR004000|Actin/actin-like
(369 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 251 7e-67
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 250 1e-66
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 248 5e-66
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 248 5e-66
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 248 6e-66
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 248 6e-66
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 248 6e-66
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 248 6e-66
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 247 1e-65
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 235 5e-62
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 215 6e-56
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 213 1e-55
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 151 6e-37
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 106 2e-23
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 76 5e-14
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 76 5e-14
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 75 8e-14
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 71 2e-12
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 70 3e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 66 4e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 65 7e-11
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 58 8e-09
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z37139-10|CAA85494.1| 999|Caenorhabditis elegans Hypothetical p... 31 1.7
Z34799-8|CAA84320.1| 999|Caenorhabditis elegans Hypothetical pr... 31 1.7
U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related h... 29 4.0
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 29 7.0
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 29 7.0
AF016682-9|AAB66189.3| 441|Caenorhabditis elegans Hypothetical ... 29 7.0
AF016682-8|AAO38605.1| 422|Caenorhabditis elegans Hypothetical ... 29 7.0
Z81479-11|CAB03945.2| 324|Caenorhabditis elegans Hypothetical p... 28 9.2
AY552606-1|AAS89253.1| 324|Caenorhabditis elegans heparan sulfa... 28 9.2
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 251 bits (614), Expect = 7e-67
Identities = 130/376 (34%), Positives = 203/376 (53%), Gaps = 12/376 (3%)
Query: 1 MSFEKPAVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVS 60
M E A+V+DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A S
Sbjct: 1 MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 61 KIEDLELNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXX 120
K L L P+E G + +WD+ME+IWHH FY EL++APE+ V+L +P
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMT 120
Query: 121 XXXXXTLNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRL 180
T N PA+ + QAVL++Y SG TTGI +D G T P+Y+G + +A L
Sbjct: 121 QIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDL 180
Query: 181 AGSQVSEYLKLQLEERGIDLGVNT-ATVIENIKRDCLYVTKD------ASMTRSDYEKYH 233
AG +++Y+ L ERG ++ +IK YV D A+ + S EK +
Sbjct: 181 AGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSY 240
Query: 234 RTADGDMVHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAI 293
DG ++ + E F E++FQP + + + + +++ CD ++R DLY
Sbjct: 241 ELPDGQVITIGNERFRCPEVLFQPAFI---GMEGAGIHETTYQSIMKCDVDIRKDLYANT 297
Query: 294 VLCGGLAMIPGLQERLAMEVENLTQT--PVNVIGSPEAYAVAWLGGATFAGLPDAKKMWV 351
VL GG +M PG+ +R+ E+++L + + +I PE W+GG+ A L ++MW+
Sbjct: 298 VLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 352 TKKQFEEYGEKIVRNK 367
+K++++E G IV K
Sbjct: 358 SKQEYDESGPSIVHRK 373
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 250 bits (612), Expect = 1e-66
Identities = 133/372 (35%), Positives = 200/372 (53%), Gaps = 11/372 (2%)
Query: 4 EKPAVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIE 63
E A+V+DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A SK
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 64 DLELNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXX 123
L L P+E G + +WD+ME+IWHH FY EL+VAPE+ V+L +P
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 124 XXTLNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGS 183
T N PA+ + QAVL++Y SG TTG+ +D G T P+Y+G + +A LAG
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 184 QVSEYLKLQLEERGIDLGVNT-ATVIENIKRDCLYVTKD------ASMTRSDYEKYHRTA 236
+++YL L ERG ++ +IK YV D + + S EK +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 237 DGDMVHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIVLC 296
DG ++ V E F E +FQP +G ++ + + N+++ CD ++R DLY VL
Sbjct: 245 DGQVITVGNERFRCPEAMFQPSF-LGMES--AGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 297 GGLAMIPGLQERLAMEVENLTQT-PVNVIGSPEAYAVAWLGGATFAGLPDAKKMWVTKKQ 355
GG M PG+ +R+ E+ L T + +I PE W+GG+ A L ++MW++K++
Sbjct: 302 GGTTMYPGIADRMQKEITALAPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 356 FEEYGEKIVRNK 367
++E G IV K
Sbjct: 362 YDESGPSIVHRK 373
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 248 bits (607), Expect = 5e-66
Identities = 132/373 (35%), Positives = 200/373 (53%), Gaps = 12/373 (3%)
Query: 4 EKPAVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIE 63
E A+V+DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A SK
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 64 DLELNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXX 123
L L P+E G + +WD+ME+IWHH FY EL+VAPE+ V+L +P
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 124 XXTLNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGS 183
T N PA+ + QAVL++Y SG TTG+ +D G T P+Y+G + +A LAG
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 184 QVSEYLKLQLEERGIDLGVNT-ATVIENIKRDCLYVTKD------ASMTRSDYEKYHRTA 236
+++YL L ERG ++ +IK YV D + + S EK +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 237 DGDMVHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIVLC 296
DG ++ V E F E +FQP +G ++ + + N+++ CD ++R DLY VL
Sbjct: 245 DGQVITVGNERFRCPEALFQPSF-LGMES--AGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 297 GGLAMIPGLQERLAMEVENLTQT--PVNVIGSPEAYAVAWLGGATFAGLPDAKKMWVTKK 354
GG M PG+ +R+ E+ L + + +I PE W+GG+ A L ++MW++K+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 355 QFEEYGEKIVRNK 367
+++E G IV K
Sbjct: 362 EYDESGPSIVHRK 374
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 248 bits (607), Expect = 5e-66
Identities = 132/373 (35%), Positives = 200/373 (53%), Gaps = 12/373 (3%)
Query: 4 EKPAVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIE 63
E A+V+DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A SK
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 64 DLELNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXX 123
L L P+E G + +WD+ME+IWHH FY EL+VAPE+ V+L +P
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 124 XXTLNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGS 183
T N PA+ + QAVL++Y SG TTG+ +D G T P+Y+G + +A LAG
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 184 QVSEYLKLQLEERGIDLGVNT-ATVIENIKRDCLYVTKD------ASMTRSDYEKYHRTA 236
+++YL L ERG ++ +IK YV D + + S EK +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 237 DGDMVHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIVLC 296
DG ++ V E F E +FQP +G ++ + + N+++ CD ++R DLY VL
Sbjct: 245 DGQVITVGNERFRCPEALFQPSF-LGMES--AGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 297 GGLAMIPGLQERLAMEVENLTQT--PVNVIGSPEAYAVAWLGGATFAGLPDAKKMWVTKK 354
GG M PG+ +R+ E+ L + + +I PE W+GG+ A L ++MW++K+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 355 QFEEYGEKIVRNK 367
+++E G IV K
Sbjct: 362 EYDESGPSIVHRK 374
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 248 bits (606), Expect = 6e-66
Identities = 132/373 (35%), Positives = 200/373 (53%), Gaps = 12/373 (3%)
Query: 4 EKPAVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIE 63
E A+V+DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A SK
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 64 DLELNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXX 123
L L P+E G + +WD+ME+IWHH FY EL+VAPE+ V+L +P
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 124 XXTLNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGS 183
T N PA+ + QAVL++Y SG TTG+ +D G T P+Y+G + +A LAG
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 184 QVSEYLKLQLEERGIDLGVNT-ATVIENIKRDCLYVTKD------ASMTRSDYEKYHRTA 236
+++YL L ERG ++ +IK YV D + + S EK +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 237 DGDMVHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIVLC 296
DG ++ V E F E +FQP +G ++ + + N+++ CD ++R DLY VL
Sbjct: 245 DGQVITVGNERFRCPEAMFQPSF-LGMES--AGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 297 GGLAMIPGLQERLAMEVENLTQT--PVNVIGSPEAYAVAWLGGATFAGLPDAKKMWVTKK 354
GG M PG+ +R+ E+ L + + +I PE W+GG+ A L ++MW++K+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 355 QFEEYGEKIVRNK 367
+++E G IV K
Sbjct: 362 EYDESGPSIVHRK 374
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 248 bits (606), Expect = 6e-66
Identities = 132/370 (35%), Positives = 199/370 (53%), Gaps = 12/370 (3%)
Query: 7 AVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIEDLE 66
A+V+DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A SK L
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 67 LNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXXXXT 126
L P+E G + +WD+ME+IWHH FY EL+VAPE+ V+L +P T
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 127 LNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGSQVS 186
N PA+ + QAVL++Y SG TTGI +D G T P+Y+G + +A LAG ++
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 187 EYLKLQLEERGIDLGVNT-ATVIENIKRDCLYVTKD------ASMTRSDYEKYHRTADGD 239
+YL L ERG ++ +IK YV D + + S EK + DG
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 247
Query: 240 MVHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIVLCGGL 299
++ V E F E +FQP +G ++ + + N+++ CD ++R DLY VL GG
Sbjct: 248 VITVGNERFRCPEALFQPSF-LGMES--AGIHETSYNSIMKCDIDIRKDLYANTVLSGGT 304
Query: 300 AMIPGLQERLAMEVENLTQT--PVNVIGSPEAYAVAWLGGATFAGLPDAKKMWVTKKQFE 357
M PG+ +R+ E+ L + + +I PE W+GG+ A L ++MW++K++++
Sbjct: 305 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 364
Query: 358 EYGEKIVRNK 367
E G IV K
Sbjct: 365 ESGPSIVHRK 374
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 248 bits (606), Expect = 6e-66
Identities = 132/373 (35%), Positives = 200/373 (53%), Gaps = 12/373 (3%)
Query: 4 EKPAVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIE 63
E A+V+DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A SK
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 64 DLELNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXX 123
L L P+E G + +WD+ME+IWHH FY EL+VAPE+ V+L +P
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 124 XXTLNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGS 183
T N PA+ + QAVL++Y SG TTG+ +D G T P+Y+G + +A LAG
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 184 QVSEYLKLQLEERGIDLGVNT-ATVIENIKRDCLYVTKD------ASMTRSDYEKYHRTA 236
+++YL L ERG ++ +IK YV D + + S EK +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 237 DGDMVHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIVLC 296
DG ++ V E F E +FQP +G ++ + + N+++ CD ++R DLY VL
Sbjct: 245 DGQVITVGNERFRCPEAMFQPSF-LGMES--AGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 297 GGLAMIPGLQERLAMEVENLTQT--PVNVIGSPEAYAVAWLGGATFAGLPDAKKMWVTKK 354
GG M PG+ +R+ E+ L + + +I PE W+GG+ A L ++MW++K+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 355 QFEEYGEKIVRNK 367
+++E G IV K
Sbjct: 362 EYDESGPSIVHRK 374
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 248 bits (606), Expect = 6e-66
Identities = 132/373 (35%), Positives = 200/373 (53%), Gaps = 12/373 (3%)
Query: 4 EKPAVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIE 63
E A+V+DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A SK
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 64 DLELNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXX 123
L L P+E G + +WD+ME+IWHH FY EL+VAPE+ V+L +P
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 124 XXTLNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGS 183
T N PA+ + QAVL++Y SG TTG+ +D G T P+Y+G + +A LAG
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 184 QVSEYLKLQLEERGIDLGVNT-ATVIENIKRDCLYVTKD------ASMTRSDYEKYHRTA 236
+++YL L ERG ++ +IK YV D + + S EK +
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 237 DGDMVHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIVLC 296
DG ++ V E F E +FQP +G ++ + + N+++ CD ++R DLY VL
Sbjct: 245 DGQVITVGNERFRCPEAMFQPSF-LGMES--AGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 297 GGLAMIPGLQERLAMEVENLTQT--PVNVIGSPEAYAVAWLGGATFAGLPDAKKMWVTKK 354
GG M PG+ +R+ E+ L + + +I PE W+GG+ A L ++MW++K+
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 355 QFEEYGEKIVRNK 367
+++E G IV K
Sbjct: 362 EYDESGPSIVHRK 374
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 247 bits (604), Expect = 1e-65
Identities = 131/370 (35%), Positives = 199/370 (53%), Gaps = 12/370 (3%)
Query: 7 AVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIEDLE 66
A+++DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A SK L
Sbjct: 8 ALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 67 LNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXXXXT 126
L P+E G + +WD+ME+IWHH FY EL+VAPE+ V+L +P T
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 127 LNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGSQVS 186
N PA+ + QAVL++Y SG TTGI +D G T P+Y+G + +A LAG ++
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 187 EYLKLQLEERGIDLGVNT-ATVIENIKRDCLYVTKD------ASMTRSDYEKYHRTADGD 239
+YL L ERG ++ +IK YV D + + S EK + DG
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 247
Query: 240 MVHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIVLCGGL 299
++ V E F E +FQP +G ++ + + N+++ CD ++R DLY VL GG
Sbjct: 248 VITVGNERFRCPEALFQPSF-LGMES--AGIHETSYNSIMKCDIDIRKDLYANTVLSGGT 304
Query: 300 AMIPGLQERLAMEVENLTQT--PVNVIGSPEAYAVAWLGGATFAGLPDAKKMWVTKKQFE 357
M PG+ +R+ E+ L + + +I PE W+GG+ A L ++MW++K++++
Sbjct: 305 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 364
Query: 358 EYGEKIVRNK 367
E G IV K
Sbjct: 365 ESGPSIVHRK 374
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 235 bits (574), Expect = 5e-62
Identities = 124/359 (34%), Positives = 191/359 (53%), Gaps = 12/359 (3%)
Query: 18 KAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIEDLELNKPVEKGRIV 77
+AGFA D+ P ++F ++VGRP + G D Y+GD+A SK L L P+E G +
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 78 HWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXXXXTLNVPALCIQPQ 137
+WD+ME+IWHH FY EL+VAPE+ V+L +P T N PA+ + Q
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 138 AVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGSQVSEYLKLQLEERG 197
AVL++Y SG TTG+ +D G T P+Y+G + +A LAG +++YL L ERG
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 184
Query: 198 IDLGVNT-ATVIENIKRDCLYVTKD------ASMTRSDYEKYHRTADGDMVHVCREAFLA 250
++ +IK YV D + + S EK + DG ++ V E F
Sbjct: 185 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRC 244
Query: 251 AELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIVLCGGLAMIPGLQERLA 310
E +FQP +G ++ + + N+++ CD ++R DLY VL GG M PG+ +R+
Sbjct: 245 PEALFQPSF-LGMES--AGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQ 301
Query: 311 MEVENLTQT--PVNVIGSPEAYAVAWLGGATFAGLPDAKKMWVTKKQFEEYGEKIVRNK 367
E+ L + + +I PE W+GG+ A L ++MW++K++++E G IV K
Sbjct: 302 KEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 360
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 215 bits (524), Expect = 6e-56
Identities = 119/366 (32%), Positives = 190/366 (51%), Gaps = 8/366 (2%)
Query: 8 VVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIEDLEL 67
VVIDNGS IKAGFA + P F VGRP Y G D++IG A S +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 68 NKPVEKGRIVHWDNMERIWHHVFYKE-LKVAPEDRAVVLACTTTSPMXXXXXXXXXXXXT 126
P+E G + +W +ME+IW ++F ++ LK+ PE+ V+L +P+ T
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 127 LNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGSQVS 186
NVPAL IQ QAVL++Y +G TTG+ +D G T P+ +G +++A LAG V+
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVT 190
Query: 187 EYLKLQLEERGIDL-GVNTATVIENIKRDCLYVTKDASMTRSDYEK-YHRTADGDMVHVC 244
EYL++ L G + N ++ +K + Y+ D + ++ K + D + +
Sbjct: 191 EYLRVLLRREGYEFHRSNEFEIVREMKENACYLALDPTKVENNSVKSSYALPDTTKIEIS 250
Query: 245 REAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIVLCGGLAMIPG 304
F A E++F+PDL+ T++ + V +++ CD +LR LY IVL GG + G
Sbjct: 251 NSLFRAPEVLFKPDLI---GTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKG 307
Query: 305 LQERLAMEVENLTQT--PVNVIGSPEAYAVAWLGGATFAGLPDAKKMWVTKKQFEEYGEK 362
+RL E+ + + + S E ++ W+GG+ A L +KMW+ KK++E+ G
Sbjct: 308 FGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGAS 367
Query: 363 IVRNKF 368
+ +F
Sbjct: 368 AMHKRF 373
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 213 bits (521), Expect = 1e-55
Identities = 113/331 (34%), Positives = 173/331 (52%), Gaps = 12/331 (3%)
Query: 46 GRQSYDVYIGDDAVSKIEDLELNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVL 105
G D Y+GD+A SK L L P+E G + +WD+ME+IWHH FY EL+VAPE+ V+L
Sbjct: 3 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 62
Query: 106 ACTTTSPMXXXXXXXXXXXXTLNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPV 165
+P T N PA+ + QAVL++Y SG TTG+ +D G T P+
Sbjct: 63 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 122
Query: 166 YQGGRIEYAHTETRLAGSQVSEYLKLQLEERGIDLGVNT-ATVIENIKRDCLYVTKD--- 221
Y+G + +A LAG +++YL L ERG ++ +IK YV D
Sbjct: 123 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 182
Query: 222 ---ASMTRSDYEKYHRTADGDMVHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAV 278
+ + S EK + DG ++ V E F E +FQP +G ++ + + N++
Sbjct: 183 EMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSF-LGMES--AGIHETSYNSI 239
Query: 279 LVCDAELRPDLYDAIVLCGGLAMIPGLQERLAMEVENLTQT--PVNVIGSPEAYAVAWLG 336
+ CD ++R DLY VL GG M PG+ +R+ E+ L + + +I PE W+G
Sbjct: 240 MKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIG 299
Query: 337 GATFAGLPDAKKMWVTKKQFEEYGEKIVRNK 367
G+ A L ++MW++K++++E G IV K
Sbjct: 300 GSILASLSTFQQMWISKQEYDESGPSIVHRK 330
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 151 bits (367), Expect = 6e-37
Identities = 102/381 (26%), Positives = 176/381 (46%), Gaps = 28/381 (7%)
Query: 5 KPAVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGS-YGR-QSYDVYIGDDAVSKI 62
+ +V+DNG+ +K G+A N P IF ++VGRP G + D+ +G++
Sbjct: 6 RKVIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLR 65
Query: 63 EDLELNKPVEKGRIVHWDNMERIWHHVFYKE-LKVAPEDRAVVLACTTTSPMXXXXXXXX 121
+ L++N P++ G + +WD+M +W H F E L + P++ ++L +P
Sbjct: 66 QMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQ 125
Query: 122 XXXXTLNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLA 181
++ + QAVL +Y G TG+ VD G T + PVY+G + + +A
Sbjct: 126 VMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIA 185
Query: 182 GSQVSEYLKLQLEERGIDLGVNTA-TVIENIKRDCLYVTKDA------SMTRSDYEKYHR 234
G +++YL L +RG + + + +K Y+ D ++ + + +
Sbjct: 186 GRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYT 245
Query: 235 TADGDMVHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIV 294
DG ++ + E F A E++FQP L+ +K L + + + D + R D Y IV
Sbjct: 246 LPDGRVIRLGGERFEAPEILFQPHLINVEKAG---LSELLFGCIQASDIDTRLDFYKHIV 302
Query: 295 LCGGLAMIPGLQERLAMEVENL-------------TQTPVNVIGSPEAYAVAWLGGATFA 341
L GG M PGL RL E++ L + + + P + +LGGA A
Sbjct: 303 LSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLA 362
Query: 342 GLPDAKKM--WVTKKQFEEYG 360
L + WV+KK++EE G
Sbjct: 363 NLMKDRDQDFWVSKKEYEEGG 383
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 106 bits (255), Expect = 2e-23
Identities = 110/413 (26%), Positives = 166/413 (40%), Gaps = 56/413 (13%)
Query: 6 PAVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSY------------GRQSYDVY 53
PA VIDNG+ K G+A + P I + + D + S G D +
Sbjct: 7 PACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFF 66
Query: 54 IGDDAVSKIE-DLELNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSP 112
IGD+A+S + + P+ G + WD MER W +K L+ PED +L +
Sbjct: 67 IGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNT 126
Query: 113 MXXXXXXXXXXXXTLNVPALCIQPQAVLAVYGSGYT--------TGISVDLGYDTTEVTP 164
+ NVP L I QAVLA+ S + TG+ +D G T P
Sbjct: 127 PENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIP 186
Query: 165 VYQGGRIEYAHTETRLAGSQVSEYLKLQLEERGIDLGVNTA-TVIENIKRDCLYVTKDAS 223
V G I +AG ++ +++ L +R + + V + IK YV D
Sbjct: 187 VADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVM 246
Query: 224 MTRSDYE----KYHRTADG--------DMVHVCREAFLAAELIFQPDLVMGQKTDFLPLP 271
Y+ K+ RT DG V V E FL E+ F P+ + T P+
Sbjct: 247 KEFVKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLGPEIFFHPEFCNPEFT--TPIS 304
Query: 272 DAVVNAVLVCDAELRPDLYDAIVLCGGLAMIPGLQERLAMEVENLTQ------------- 318
D + + C ++R LY+ IVL GG M +L +V+ L+
Sbjct: 305 DTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGR 364
Query: 319 ---TPVNV---IGSPEAYAVAWLGGATFAGLPDAKKMWVTKKQFEEYGEKIVR 365
P++V + YAV W GG+ A + ++ TK ++ E G I R
Sbjct: 365 LKPKPIDVQVISHKMQRYAV-WFGGSMLASTSEFYQVSHTKAEYMERGPSICR 416
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 75.8 bits (178), Expect = 5e-14
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 4 EKPAVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIE 63
E A+V+DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A SK
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 64 DLELNKPVEKGRIVHWDNMERI 85
L L P+E G + +WD+ME+I
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 75.8 bits (178), Expect = 5e-14
Identities = 37/82 (45%), Positives = 52/82 (63%)
Query: 4 EKPAVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIE 63
E A+V+DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A SK
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 64 DLELNKPVEKGRIVHWDNMERI 85
L L P+E G + +WD+ME+I
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 74.9 bits (176), Expect = 8e-14
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 7 AVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIEDLE 66
A+V+DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A SK L
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 67 LNKPVEKGRIVHWDNMERI 85
L P+E G + +WD+ME+I
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 7 AVVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIEDLE 66
A+V+DNGS KAGFA D+ P ++F ++VGRP + G D Y+GD+A SK L
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 67 LNKPVEKGRIVHWDNM 82
L P+E G + +WD+M
Sbjct: 68 LKYPIEHGIVTNWDDM 83
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 69.7 bits (163), Expect = 3e-12
Identities = 91/380 (23%), Positives = 145/380 (38%), Gaps = 27/380 (7%)
Query: 8 VVIDNGSYNIKAGFACDNH--PVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIEDL 65
++++ GS +I+AG P S F + R D G +Y I + + +
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNG-DFVRPI 239
Query: 66 ELNKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXXXX 125
P + + D ++ + V KELKV P V+L+ P
Sbjct: 240 SATDPSVERYSIDKDVLKAVIGKVT-KELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 126 TLNVPALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGSQV 185
+ + I Q L +Y TTG+ VD+G + + PV G +E A Q+
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIG-ERVNIVPVIDGYVVESAICSIPYGSQQM 357
Query: 186 SEYLKLQLEERGIDLGVNTATVIENIKRDCL----YVTKDASMTRSDYEKYHR------T 235
+ L+ L L + V + I R L YV +D K R T
Sbjct: 358 GDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFT 417
Query: 236 ADGDM---VHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVNAVLVCDAELRPDLYDA 292
M + FL E +F+P D L + A+L C + R LY
Sbjct: 418 PSPGMQTRFDIDNSRFLCTEGLFKPKK---WGLDTKGLHQLIHEAILQCPIDSRRTLYRN 474
Query: 293 IVLCGGLAMIPGLQERLAME----VENLTQTPVNVIGSPEAYAVAWLGGATFAGLPDAKK 348
I L GG +++PG+ E+L E V N T VN+ SP Y A+LG A +
Sbjct: 475 IYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNI--SPWRYNAAYLGAQIVASASTFED 532
Query: 349 MWVTKKQFEEYGEKIVRNKF 368
++ +Q ++ ++ + F
Sbjct: 533 SCISLQQLPKFLAQLQSSSF 552
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 66.1 bits (154), Expect = 4e-11
Identities = 84/397 (21%), Positives = 159/397 (40%), Gaps = 50/397 (12%)
Query: 8 VVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIEDLEL 67
++ DNG +N+K G P + ++V + ++ V + S L
Sbjct: 6 IIFDNGGHNMKIGTIDSESPRLVPNSIV------KAKHEKKRVFVAHEQEECSDKFSLFY 59
Query: 68 NKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXXXXTL 127
+P+E+G +V+WD ++IW F A R + P
Sbjct: 60 VRPIERGYVVNWDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFG 119
Query: 128 NVPALCIQPQAVLAVYGSGYTT---GISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGSQ 184
++A + + + VD G+ T V G I+ + + G
Sbjct: 120 FTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKA 179
Query: 185 VSEYLKLQLEERGIDLGVNTATVIENIKRDCLYVTK--DASM--TRSDYEK--------- 231
++ LK + R +++ T VI K D +V++ D SM R+ +++
Sbjct: 180 LTNKLKDWVSYRQLNVSEETY-VINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIM 238
Query: 232 --YHRTADGDM-------------VHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVN 276
+H T G + +H+ E F E++F P + D + +AV+
Sbjct: 239 PDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDI---DIDQCGVAEAVIE 295
Query: 277 AVLVCDAELRPDLYDAIVLCGGLAMIPGLQERLAMEVENL--TQTPVNV---IGSPEAYA 331
++ C LRP L + I++ GG + PG +ERL EV ++ + +NV + +P+ +
Sbjct: 296 SICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQTH- 354
Query: 332 VAWLGGATFAGLPDAKKMWVTKKQFEEYGEKIVRNKF 368
+W G L +K W+ +K ++E G+ + + F
Sbjct: 355 -SWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNF 388
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 65.3 bits (152), Expect = 7e-11
Identities = 84/397 (21%), Positives = 158/397 (39%), Gaps = 50/397 (12%)
Query: 8 VVIDNGSYNIKAGFACDNHPVSIFRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIEDLEL 67
++ DNG +N+K G P + ++V + ++ V + S L
Sbjct: 6 IIFDNGGHNMKIGTIDSESPRLVPNSIV------KAKHEKKRVFVAHEQEECSDKFSLFY 59
Query: 68 NKPVEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXXXXTL 127
+P+E+G +V+WD ++IW F A R + P
Sbjct: 60 VRPIERGYVVNWDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFG 119
Query: 128 NVPALCIQPQAVLAVYGSGYTT---GISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGSQ 184
++A + + + VD G+ T V G I+ + + G
Sbjct: 120 FTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKA 179
Query: 185 VSEYLKLQLEERGIDLGVNTATVIENIKRDCLYVTK--DASM--TRSDYE---------- 230
++ LK + R +++ T VI K D +V++ D SM R+ ++
Sbjct: 180 LTNKLKDWVSYRQLNVSEETY-VINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIM 238
Query: 231 -KYHRTADGDM-------------VHVCREAFLAAELIFQPDLVMGQKTDFLPLPDAVVN 276
+H T G + +H+ E F E++F P + D + +AV+
Sbjct: 239 PDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDI---DIDQCGVAEAVIE 295
Query: 277 AVLVCDAELRPDLYDAIVLCGGLAMIPGLQERLAMEVENL--TQTPVNV---IGSPEAYA 331
++ C LRP L + I++ GG + PG +ERL EV ++ + +NV + +P+ +
Sbjct: 296 SICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQTH- 354
Query: 332 VAWLGGATFAGLPDAKKMWVTKKQFEEYGEKIVRNKF 368
+W G L +K W+ +K ++E G+ + + F
Sbjct: 355 -SWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNF 388
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 58.4 bits (135), Expect = 8e-09
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 71 VEKGRIVHWDNMERIWHHVFYKELKVAPEDRAVVLACTTTSPMXXXXXXXXXXXXTLNVP 130
+++G I W+ E+I H + L P + V+ + ++ + VP
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 131 ALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETRLAGSQVSEYLK 190
A + VL+ + G T G+ VD G T V PV+ G + +A + + G ++E L
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLA 213
Query: 191 LQLEERGIDL 200
L+++ ID+
Sbjct: 214 QMLDQQKIDV 223
Score = 56.4 bits (130), Expect = 3e-08
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 262 GQKTDFLPLPDAVVNAVLVCDAELRPDLYDAIVLCGGLAMIPGLQERL--AMEVENLTQT 319
G+K + + + + D ++RP L+ + + GG ++I G ERL A+ +
Sbjct: 324 GKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTI 383
Query: 320 PVNVIGSP---EAYAVAWLGGATFAGLPDAKKMWVTKKQFEEYGEKIVRNK 367
+ V +P E AW+GG+ L ++MWV+K +++E G+ IV K
Sbjct: 384 KLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDESGKSIVEKK 434
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 46.8 bits (106), Expect = 2e-05
Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 30/214 (14%)
Query: 131 ALCIQPQAVLAVYGSGYTTGISVDLGYDTTEVTPVYQGGRIEYAHTETR-LAGSQVSEYL 189
+L P V A + + VD+G+ P+ +G + R + G Q+ +
Sbjct: 21 SLMFMPSHVCATFPFNTQNALVVDIGHSECIAVPIIEGVTMLNEFESARSICGRQLERRV 80
Query: 190 KLQLEERG--IDLGVNTATVIENIKRD---C-LYVTKDASMTRSDYE------KYHRTAD 237
+ Q+E+ G +L + EN +D C L T S+ D E K+ + +
Sbjct: 81 REQMEKYGQIAELNGERRAITENDWQDIDACKLIETLSLSLICLDKERAENWTKWEASEE 140
Query: 238 G---DMVHVCREAFLA--AELIFQPDLVMGQKTDF------------LPLPDAVVNAVLV 280
G D+ +C+E ++ P +V T+ L LP + V
Sbjct: 141 GEKPDIETLCKERLFPNNGKIFVVPPVVFETSTEIFFNENLNPTSFDLSLPKLLHKLVSK 200
Query: 281 CDAELRPDLYDAIVLCGGLAMIPGLQERLAMEVE 314
C +LR L+ I+L GG++ IPGL +RL E++
Sbjct: 201 CPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQ 234
>Z37139-10|CAA85494.1| 999|Caenorhabditis elegans Hypothetical
protein F34D10.2 protein.
Length = 999
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 293 IVLCGGLAMIPGLQERLAMEVENLTQTPVNVIGSPE 328
I+LCGG A + G++ER+ + N+ P+N P+
Sbjct: 691 ILLCGGRASVEGVKERMTI---NIAANPLNCFTKPD 723
>Z34799-8|CAA84320.1| 999|Caenorhabditis elegans Hypothetical
protein F34D10.2 protein.
Length = 999
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 293 IVLCGGLAMIPGLQERLAMEVENLTQTPVNVIGSPE 328
I+LCGG A + G++ER+ + N+ P+N P+
Sbjct: 691 ILLCGGRASVEGVKERMTI---NIAANPLNCFTKPD 723
>U58757-1|AAD47117.2| 620|Caenorhabditis elegans Dicer related
helicase protein 2 protein.
Length = 620
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 211 IKRDCLYVTKDASMTRSDYEKYHRTADGDMVHVCREA 247
+K+ + KDA R+ E H TA+G++++V R+A
Sbjct: 584 LKQRDVQTMKDADYGRAPIEFEHHTANGEVINVIRQA 620
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 188 YLKLQLEERGIDLGVNTATVIENIKRDCLYVTKDASMTRSDY 229
Y +L+ RGID+ + +E +K D L KD R+ Y
Sbjct: 803 YPNNKLDARGIDVELRRKLRMEKVKADLLKQPKDGDKPRNSY 844
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 188 YLKLQLEERGIDLGVNTATVIENIKRDCLYVTKDASMTRSDY 229
Y +L+ RGID+ + +E +K D L KD R+ Y
Sbjct: 844 YPNNKLDARGIDVELRRKLRMEKVKADLLKQPKDGDKPRNSY 885
>AF016682-9|AAB66189.3| 441|Caenorhabditis elegans Hypothetical
protein T07D3.9a protein.
Length = 441
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 55 GDDAVSKIEDLELNKPVEKGRIVHWDN 81
G A+ ++ +E KPVE G ++H+D+
Sbjct: 327 GRVAIRSMDQIEFQKPVEIGHVLHFDS 353
>AF016682-8|AAO38605.1| 422|Caenorhabditis elegans Hypothetical
protein T07D3.9b protein.
Length = 422
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 55 GDDAVSKIEDLELNKPVEKGRIVHWDN 81
G A+ ++ +E KPVE G ++H+D+
Sbjct: 282 GRVAIRSMDQIEFQKPVEIGHVLHFDS 308
>Z81479-11|CAB03945.2| 324|Caenorhabditis elegans Hypothetical
protein C34F6.4 protein.
Length = 324
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 31 FRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIED----LELNKP-VEKGRIVHWDNMERI 85
F T VG P+ L + + + Y+ S++ D LE+ P KG + H+D+++
Sbjct: 193 FCTEVGNPEALRVAK-QNVLEKYLLVGTTSRMRDMIALLEVTVPDFFKGALGHFDSLDAN 251
Query: 86 WHHVFYKELKVAPEDRAV 103
H+ Y + K+ P D+ +
Sbjct: 252 RAHLRYTKKKIPPNDQTL 269
>AY552606-1|AAS89253.1| 324|Caenorhabditis elegans heparan sulfate
2O-sulfotransferase protein.
Length = 324
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 31 FRTVVGRPDYLHGSYGRQSYDVYIGDDAVSKIED----LELNKP-VEKGRIVHWDNMERI 85
F T VG P+ L + + + Y+ S++ D LE+ P KG + H+D+++
Sbjct: 193 FCTEVGNPEALRVAK-QNVLEKYLLVGTTSRMRDMIALLEVTVPDFFKGALGHFDSLDAN 251
Query: 86 WHHVFYKELKVAPEDRAV 103
H+ Y + K+ P D+ +
Sbjct: 252 RAHLRYTKKKIPPNDQTL 269
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.137 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,011,818
Number of Sequences: 27539
Number of extensions: 370937
Number of successful extensions: 783
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 700
Number of HSP's gapped (non-prelim): 37
length of query: 369
length of database: 12,573,161
effective HSP length: 82
effective length of query: 287
effective length of database: 10,314,963
effective search space: 2960394381
effective search space used: 2960394381
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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