GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002082-TA|BGIBMGA002082-PA|IPR004000|Actin/actin-like
         (376 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    27   0.29 
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    25   0.67 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    24   1.6  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    24   2.1  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    24   2.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    24   2.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    24   2.1  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    24   2.1  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    24   2.1  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   2.7  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 26.6 bits (56), Expect = 0.29
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 196 YSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHV-YTLPDGQE 245
           + +TTK DN  L+ +  ++  +    D  +E G+CS D   +   +PD  E
Sbjct: 24  HKYTTKYDNIDLENVVKNERLLKSYVDCLLEKGRCSPDGLELKKNMPDAIE 74


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 25.4 bits (53), Expect = 0.67
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 191 LATVGYSFTTKADN-DILDQIKSDKCYVALDYDDEVESGKCSGDDKHV-YTLPD 242
           LA     +TTK DN D+ + +KSD+  +   ++  +E G CS D + +   LPD
Sbjct: 17  LARPQEKYTTKYDNIDLEEILKSDR-LLKNYFNCLMERGTCSPDGEELKKALPD 69


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 198 FTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGD-DKHVYTLPD 242
           +TTK DN  +D+I + +  +   ++  ++ G C+ D D+    LPD
Sbjct: 19  YTTKYDNINVDEILASERLLKNYFNCIMDRGACTPDADELKRVLPD 64


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 58  QKRGISHLTWPVSKGLIQDWDEMEK 82
           Q RG+ H  W +S  ++  W  ME+
Sbjct: 210 QSRGLFHRGWSMSGTMLVPWALMEQ 234


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 58  QKRGISHLTWPVSKGLIQDWDEMEK 82
           Q RG+ H  W +S  ++  W  ME+
Sbjct: 210 QSRGLFHRGWSMSGTMLVPWALMEQ 234


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 58  QKRGISHLTWPVSKGLIQDWDEMEK 82
           Q RG+ H  W +S  ++  W  ME+
Sbjct: 210 QSRGLFHRGWSMSGTMLVPWALMEQ 234


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 58  QKRGISHLTWPVSKGLIQDWDEMEK 82
           Q RG+ H  W +S  ++  W  ME+
Sbjct: 210 QSRGLFHRGWSMSGTMLVPWALMEQ 234


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 58  QKRGISHLTWPVSKGLIQDWDEMEK 82
           Q RG+ H  W +S  ++  W  ME+
Sbjct: 210 QSRGLFHRGWSMSGTMLVPWALMEQ 234


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)

Query: 236 HVYTLPDGQEIFLGPERFQCPELMFRP 262
           H+Y L    +I+  PE+F  PE  FRP
Sbjct: 107 HIYDLHHNPDIYPDPEKFD-PE-RFRP 131


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 284 DLDYQRAFYENVVIAGGSTMFPGIVDRLQLELTKKLLKRSEN 325
           D D  +   + +V+ GGST  P I   ++     K L R  N
Sbjct: 150 DADMTKDQIDEIVLVGGSTRIPKIQQLIKDFFDGKELNRGIN 191


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.139    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,590
Number of Sequences: 317
Number of extensions: 4276
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 10
length of query: 376
length of database: 114,650
effective HSP length: 58
effective length of query: 318
effective length of database: 96,264
effective search space: 30611952
effective search space used: 30611952
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)