Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002082-TA|BGIBMGA002082-PA|IPR004000|Actin/actin-like
(376 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 328 3e-90
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 328 5e-90
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 328 5e-90
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 328 5e-90
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 328 5e-90
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 328 5e-90
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 326 1e-89
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 326 1e-89
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 318 3e-87
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 315 4e-86
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 289 2e-78
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 246 2e-65
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 242 2e-64
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 145 4e-35
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 94 1e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 92 5e-19
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 82 5e-16
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 81 2e-15
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 81 2e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 78 1e-14
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 77 2e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 77 3e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF036704-1|AAB88560.2| 293|Caenorhabditis elegans Hypothetical ... 31 1.8
Z72507-9|CAC35886.1| 282|Caenorhabditis elegans Hypothetical pr... 29 7.1
AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical ... 29 7.1
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 328 bits (807), Expect = 3e-90
Identities = 159/375 (42%), Positives = 237/375 (63%), Gaps = 5/375 (1%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 61
D ++LD GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 DVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 62 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 121
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 122 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 181
FE+F ++Y+A L+L+ASGRTTG+V +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 182 TLSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHVYTLP 241
L+ +L K+L GYSFTT A+ +I+ IK CYVALD++ E+ + S + Y LP
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 242 DGQEIFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENVVIAGGS 301
DGQ I +G ERF+CPE +F+P+ G++ + + SI CD+D ++ Y N V++GG+
Sbjct: 245 DGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGT 304
Query: 302 TMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNGFLLSKE 361
TM+PGI DR+Q E+T K+ + A R+++VW GGSI+ASLST +SK+
Sbjct: 305 TMYPGIADRMQKEIT---ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 362 EYEDNGSDRVKHLFF 376
EY+++G V F
Sbjct: 362 EYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 328 bits (805), Expect = 5e-90
Identities = 160/375 (42%), Positives = 237/375 (63%), Gaps = 5/375 (1%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 61
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 62 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 121
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 122 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 181
FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 182 TLSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHVYTLP 241
L+ +L K+L GYSFTT A+ +I+ IK CYVALD++ E+ + S + Y LP
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 242 DGQEIFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENVVIAGGS 301
DGQ I +G ERF+CPE MF+P+ G++ + + SI CD+D ++ Y N V++GG+
Sbjct: 245 DGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGT 304
Query: 302 TMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNGFLLSKE 361
TM+PGI DR+Q E+T K+ + A R+++VW GGSI+ASLST +SK+
Sbjct: 305 TMYPGIADRMQKEIT---ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 362 EYEDNGSDRVKHLFF 376
EY+++G V F
Sbjct: 362 EYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 328 bits (805), Expect = 5e-90
Identities = 159/375 (42%), Positives = 237/375 (63%), Gaps = 5/375 (1%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 61
D +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 62 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 121
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 122 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 181
FE+F ++Y+A L+L+ASGRTTG+V +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 182 TLSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHVYTLP 241
L+ +L K+L GYSFTT A+ +I+ IK CYVALD++ E+ + S + Y LP
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 242 DGQEIFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENVVIAGGS 301
DGQ I +G ERF+CPE +F+P+ G++ + + SI CD+D ++ Y N V++GG+
Sbjct: 245 DGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGT 304
Query: 302 TMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNGFLLSKE 361
TM+PGI DR+Q E+T K+ + A R+++VW GGSI+ASLST +SK+
Sbjct: 305 TMYPGIADRMQKEIT---ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 362 EYEDNGSDRVKHLFF 376
EY+++G V F
Sbjct: 362 EYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 328 bits (805), Expect = 5e-90
Identities = 160/375 (42%), Positives = 237/375 (63%), Gaps = 5/375 (1%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 61
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 62 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 121
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 122 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 181
FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 182 TLSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHVYTLP 241
L+ +L K+L GYSFTT A+ +I+ IK CYVALD++ E+ + S + Y LP
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 242 DGQEIFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENVVIAGGS 301
DGQ I +G ERF+CPE MF+P+ G++ + + SI CD+D ++ Y N V++GG+
Sbjct: 245 DGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGT 304
Query: 302 TMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNGFLLSKE 361
TM+PGI DR+Q E+T K+ + A R+++VW GGSI+ASLST +SK+
Sbjct: 305 TMYPGIADRMQKEIT---ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 362 EYEDNGSDRVKHLFF 376
EY+++G V F
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 328 bits (805), Expect = 5e-90
Identities = 160/375 (42%), Positives = 238/375 (63%), Gaps = 6/375 (1%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 61
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 62 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 121
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 122 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 181
FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 182 TLSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHVYTLP 241
L+ +L K+L GYSFTT A+ +I+ IK CYVALD++ E+ + S + Y LP
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 242 DGQEIFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENVVIAGGS 301
DGQ I +G ERF+CPE MF+P+ G++ + + SI CD+D ++ Y N V++GG+
Sbjct: 245 DGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGT 304
Query: 302 TMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNGFLLSKE 361
TM+PGI DR+Q E+T + K+ + A R+++VW GGSI+ASLST +SK+
Sbjct: 305 TMYPGIADRMQKEIT----ALAPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 362 EYEDNGSDRVKHLFF 376
EY+++G V F
Sbjct: 361 EYDESGPSIVHRKCF 375
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 328 bits (805), Expect = 5e-90
Identities = 160/375 (42%), Positives = 237/375 (63%), Gaps = 5/375 (1%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 61
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 62 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 121
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 122 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 181
FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 182 TLSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHVYTLP 241
L+ +L K+L GYSFTT A+ +I+ IK CYVALD++ E+ + S + Y LP
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 242 DGQEIFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENVVIAGGS 301
DGQ I +G ERF+CPE MF+P+ G++ + + SI CD+D ++ Y N V++GG+
Sbjct: 245 DGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGT 304
Query: 302 TMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNGFLLSKE 361
TM+PGI DR+Q E+T K+ + A R+++VW GGSI+ASLST +SK+
Sbjct: 305 TMYPGIADRMQKEIT---ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 362 EYEDNGSDRVKHLFF 376
EY+++G V F
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 326 bits (802), Expect = 1e-89
Identities = 159/375 (42%), Positives = 237/375 (63%), Gaps = 5/375 (1%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 61
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 62 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 121
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 122 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 181
FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 182 TLSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHVYTLP 241
L+ +L K+L GYSFTT A+ +I+ IK CYVALD++ E+ + S + Y LP
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 242 DGQEIFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENVVIAGGS 301
DGQ I +G ERF+CPE +F+P+ G++ + + SI CD+D ++ Y N V++GG+
Sbjct: 245 DGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGT 304
Query: 302 TMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNGFLLSKE 361
TM+PGI DR+Q E+T K+ + A R+++VW GGSI+ASLST +SK+
Sbjct: 305 TMYPGIADRMQKEIT---ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 362 EYEDNGSDRVKHLFF 376
EY+++G V F
Sbjct: 362 EYDESGPSIVHRKCF 376
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 326 bits (802), Expect = 1e-89
Identities = 159/375 (42%), Positives = 237/375 (63%), Gaps = 5/375 (1%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 61
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 62 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 121
I L +P+ G++ +WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 122 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 181
FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 182 TLSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHVYTLP 241
L+ +L K+L GYSFTT A+ +I+ IK CYVALD++ E+ + S + Y LP
Sbjct: 185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244
Query: 242 DGQEIFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENVVIAGGS 301
DGQ I +G ERF+CPE +F+P+ G++ + + SI CD+D ++ Y N V++GG+
Sbjct: 245 DGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGT 304
Query: 302 TMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNGFLLSKE 361
TM+PGI DR+Q E+T K+ + A R+++VW GGSI+ASLST +SK+
Sbjct: 305 TMYPGIADRMQKEIT---ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 362 EYEDNGSDRVKHLFF 376
EY+++G V F
Sbjct: 362 EYDESGPSIVHRKCF 376
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 318 bits (782), Expect = 3e-87
Identities = 154/361 (42%), Positives = 230/361 (63%), Gaps = 5/361 (1%)
Query: 18 KAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRGISHLTWPVSKGLIQ 75
+AGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRGI L +P+ G++
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 76 DWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEILFESFTINSLYLARM 135
+WD+MEK+WHH FY L + PE V+ + PL P+ ++EK+T+I+FE+F ++Y+A
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 136 QALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGETLSGHLQKLLATVG 195
L+L+ASGRTTGVV +SG ++ P++EG+ L +A + G L+ +L K+L G
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 184
Query: 196 YSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHVYTLPDGQEIFLGPERFQC 255
YSFTT A+ +I+ IK CYVALD++ E+ + S + Y LPDGQ I +G ERF+C
Sbjct: 185 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRC 244
Query: 256 PELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENVVIAGGSTMFPGIVDRLQLEL 315
PE +F+P+ G++ + + SI CD+D ++ Y N V++GG+TM+PGI DR+Q E+
Sbjct: 245 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 304
Query: 316 TKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNGFLLSKEEYEDNGSDRVKHLF 375
T K+ + A R+++VW GGSI+ASLST +SK+EY+++G V
Sbjct: 305 T---ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 361
Query: 376 F 376
F
Sbjct: 362 F 362
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 315 bits (773), Expect = 4e-86
Identities = 154/378 (40%), Positives = 236/378 (62%), Gaps = 5/378 (1%)
Query: 1 MSGDAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQ 58
M + +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA
Sbjct: 1 MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 59 KRGISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKIT 118
KRGI L +P+ G++ +WD+MEK+WHH FY L I PE V+ + PL P+ ++EK+T
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMT 120
Query: 119 EILFESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPV 178
+I+FE+F ++Y+ L+L+ASGRTTG+V ++G ++ P++EG+ L +A +
Sbjct: 121 QIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDL 180
Query: 179 DGETLSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHVY 238
G L+ ++ K+L GY+FTT A+ +I+ IK CYVA D++ E+ + S + Y
Sbjct: 181 AGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSY 240
Query: 239 TLPDGQEIFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENVVIA 298
LPDGQ I +G ERF+CPE++F+P G++ + + +SI CD+D ++ Y N V++
Sbjct: 241 ELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLS 300
Query: 299 GGSTMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNGFLL 358
GG++MFPGI DR+Q E+ K+ + A R+++VW GGSI+ASLST +
Sbjct: 301 GGTSMFPGIADRMQKEIQH---LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 359 SKEEYEDNGSDRVKHLFF 376
SK+EY+++G V F
Sbjct: 358 SKQEYDESGPSIVHRKCF 375
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 289 bits (710), Expect = 2e-78
Identities = 137/331 (41%), Positives = 209/331 (63%), Gaps = 3/331 (0%)
Query: 46 GFPEVYCGNEAIQKRGISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSI 105
G + Y G+EA KRGI L +P+ G++ +WD+MEK+WHH FY L + PE V+ +
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 106 HPLCPRKHQEKITEILFESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFE 165
PL P+ ++EK+T+I+FE+F ++Y+A L+L+ASGRTTGVV +SG ++ P++E
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYE 124
Query: 166 GFPLRNATFMSPVDGETLSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALDYDDEV 225
G+ L +A + G L+ +L K+L GYSFTT A+ +I+ IK CYVALD++ E+
Sbjct: 125 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 184
Query: 226 ESGKCSGDDKHVYTLPDGQEIFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDL 285
+ S + Y LPDGQ I +G ERF+CPE +F+P+ G++ + + SI CD+
Sbjct: 185 ATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDI 244
Query: 286 DYQRAFYENVVIAGGSTMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGS 345
D ++ Y N V++GG+TM+PGI DR+Q E+T K+ + A R+++VW GGS
Sbjct: 245 DIRKDLYANTVLSGGTTMYPGIADRMQKEIT---ALAPSTMKIKIIAPPERKYSVWIGGS 301
Query: 346 IMASLSTMNGFLLSKEEYEDNGSDRVKHLFF 376
I+ASLST +SK+EY+++G V F
Sbjct: 302 ILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 246 bits (602), Expect = 2e-65
Identities = 135/374 (36%), Positives = 219/374 (58%), Gaps = 15/374 (4%)
Query: 8 IVLDIGSKYTKAGFAGECFPRAVFPSTVGRFR----QSGLVDGFPEVYCGNEAIQKRGIS 63
+V+D GS KAGFAGE P+ F + VGR + +G +DG +++ G +A RG+
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDG--DIFIGPKAESNRGLF 68
Query: 64 HLTWPVSKGLIQDWDEMEKLWHHIFYKGLL-IPPEACSVVHSIHPLCPRKHQEKITEILF 122
+ +P+ G++ +W +MEK+W +IF + L I PE V+ + PL P K++E+ EI F
Sbjct: 69 SIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFF 128
Query: 123 ESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGET 182
E+F + +LY+ L+L+A+GRTTGVV +SG ++A P+ +GF +++A + G
Sbjct: 129 ETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRD 188
Query: 183 LSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHVYTLPD 242
++ +L+ LL GY F + +I+ ++K + CY+ALD +VE+ K Y LPD
Sbjct: 189 VTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD-PTKVENNSV----KSSYALPD 243
Query: 243 GQEIFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENVVIAGGST 302
+I + F+ PE++F+P+L G + P + ++ +SI CD+D ++ Y N+V++GG+T
Sbjct: 244 TTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTT 303
Query: 303 MFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNGFLLSKEE 362
+F G DRL E+ K + K+ + A R W GGSI+ASL T L K+E
Sbjct: 304 LFKGFGDRLLGEMRK---IAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKE 360
Query: 363 YEDNGSDRVKHLFF 376
YED G+ + FF
Sbjct: 361 YEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 242 bits (593), Expect = 2e-64
Identities = 133/378 (35%), Positives = 218/378 (57%), Gaps = 15/378 (3%)
Query: 8 IVLDIGSKYTKAGFAGECFPRAVFPSTVGR--FRQSGLVDGFP--EVYCGNEAIQKRGIS 63
IV+D G+ + K G+AG FP +FPS VGR R + V ++ G E Q R +
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 64 HLTWPVSKGLIQDWDEMEKLWHHIFYKGLL-IPPEACSVVHSIHPLCPRKHQEKITEILF 122
+ +P+ G++++WD+M +W H F L I P+ C ++ + PL P ++EK+ +++F
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 123 ESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGET 182
E + NS+Y+A L L+A G TGVV +SG ++ PV+EGF L + T + G
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRD 188
Query: 183 LSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHVYTLPD 242
++ +L KLL GY+F AD + + Q+K CY+A D + E + YTLPD
Sbjct: 189 ITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPD 248
Query: 243 GQEIFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENVVIAGGST 302
G+ I LG ERF+ PE++F+P+L ++ L +LL I+ D+D + FY+++V++GG+T
Sbjct: 249 GRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTT 308
Query: 303 MFPGIVDRLQLELTKKLLKR--------SENWKVLVDAMTTRQFAVWNGGSIMASL--ST 352
M+PG+ RL+ EL + L R + +K+ ++A +R+ V+ GG+++A+L
Sbjct: 309 MYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDR 368
Query: 353 MNGFLLSKEEYEDNGSDR 370
F +SK+EYE+ G R
Sbjct: 369 DQDFWVSKKEYEEGGIAR 386
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 145 bits (352), Expect = 4e-35
Identities = 114/403 (28%), Positives = 190/403 (47%), Gaps = 45/403 (11%)
Query: 9 VLDIGSKYTKAGFAGECFPRAVFPSTVG-----------RFRQSGLVD-GFPEV--YCGN 54
V+D G+ YTK G+AG P+ + PS + R + V G ++ + G+
Sbjct: 10 VIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGD 69
Query: 55 EAIQKRGISH-LTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKH 113
EA+ ++ + +P+ G+++DWD ME+ W +K L PE + + PL ++
Sbjct: 70 EALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPEN 129
Query: 114 QEKITEILFESFTINSLYLARMQALALFASGRT--------TGVVWESGYSCSYAAPVFE 165
+E EI+FESF + LY+A LAL AS + TG+V +SG ++ PV +
Sbjct: 130 REYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVAD 189
Query: 166 GFPLRNATFMSPVDGETLSGHLQKLLATVGYSFTTKADNDILDQIKSDKCYVALD----- 220
G+ + + P+ G ++ +Q LL ++ + ++ IK CYV D
Sbjct: 190 GYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEF 249
Query: 221 --YDDEVESGKCSGDDKHVYTLPDGQEIFLGPERFQCPELMFRPNLGGLQCPS-LVDLLC 277
YD + + D + T + +G ERF PE+ F P + + + D +
Sbjct: 250 VKYDTDAAKWLRTYDGINSIT-KKPFNVDVGYERFLGPEIFFHPEFCNPEFTTPISDTID 308
Query: 278 KSIENCDLDYQRAFYENVVIAGGSTMFPGIVDRLQLE---LTKKLLKRSENWK------- 327
I+ C +D +R YEN+V++GGSTMF +LQ + L+ L+ SE
Sbjct: 309 TLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPK 368
Query: 328 ---VLVDAMTTRQFAVWNGGSIMASLSTMNGFLLSKEEYEDNG 367
V V + +++AVW GGS++AS S +K EY + G
Sbjct: 369 PIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERG 411
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 94.3 bits (224), Expect = 1e-19
Identities = 94/367 (25%), Positives = 160/367 (43%), Gaps = 20/367 (5%)
Query: 8 IVLDIGSKYTKAGF--AGECFPRAVFPSTVGRFRQSGLVDGF----PEVYCGNEAIQKRG 61
++L++GS +AG P++ FP+ R + G PE+ + + R
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFV--RP 238
Query: 62 ISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEIL 121
IS V + I D D ++ + + K L + P V+ SI P ++ +I
Sbjct: 239 ISATDPSVERYSI-DKDVLKAVIGKVT-KELKVEPWKYKVLLSIPQNIPTVLIGELLQIC 296
Query: 122 FESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMSPVDGE 181
E S + R +L L+A TTGVV + G + PV +G+ + +A P +
Sbjct: 297 LEDIKFQSAGITRQPSLILYAYDVTTGVVVDIGERVNIV-PVIDGYVVESAICSIPYGSQ 355
Query: 182 TLSGHLQKLLATVG---YSFTTKADNDILDQIKSDKCYVALDYDDEVES-GKCSGDDKHV 237
+ L+ L+ Y+F + + IL YV DY E +S K +
Sbjct: 356 QMGDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDA 415
Query: 238 YTLPDGQE--IFLGPERFQCPELMFRPNLGGLQCPSLVDLLCKSIENCDLDYQRAFYENV 295
+T G + + RF C E +F+P GL L L+ ++I C +D +R Y N+
Sbjct: 416 FTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNI 475
Query: 296 VIAGGSTMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNG 355
+AGG+++ PGI ++L+ EL+ + V+ R A + G I+AS ST
Sbjct: 476 YLAGGASLMPGIAEKLEQELSTVV---PNTIHTQVNISPWRYNAAYLGAQIVASASTFED 532
Query: 356 FLLSKEE 362
+S ++
Sbjct: 533 SCISLQQ 539
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 92.3 bits (219), Expect = 5e-19
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 20/209 (9%)
Query: 3 GDAI-GIVLDIGSKYTKAGFAGECFPRAVFPSTVGRF---------RQSGLVDGF----- 47
GD + G+V D GS+ + GFAGE +P+ PS + +Q + +G
Sbjct: 8 GDEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQ 67
Query: 48 ----PEVYCGN-EAIQKRGISHLTWPVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVV 102
+ G + I R +++ + +GLI+DW+ EK+ H + L P V+
Sbjct: 68 TKREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVL 127
Query: 103 HSIHPLCPRKHQEKITEILFESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAP 162
S R +EK+TEI+FE F + + YL++ L+ FA GRT G++ +SG + + P
Sbjct: 128 FSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVP 187
Query: 163 VFEGFPLRNATFMSPVDGETLSGHLQKLL 191
VF+G+ + +A P+ G+ ++ L ++L
Sbjct: 188 VFDGYAVTHAVVKCPIGGDLITEQLAQML 216
Score = 65.3 bits (152), Expect = 7e-11
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 238 YTLPDGQEIFLGPERFQCPELMFRPNLGGLQCPSLVD-------LLCKSIENCDLDYQRA 290
Y P+G G ER + PE +F +LG L+ D + S D+D +
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLF--DLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPT 350
Query: 291 FYENVVIAGGSTMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASL 350
+ NV + GG+++ G +RL L K + R++ W GGSI+ SL
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410
Query: 351 STMNGFLLSKEEYEDNGSDRVK 372
T +SK EY+++G V+
Sbjct: 411 GTFQQMWVSKAEYDESGKSIVE 432
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 82.2 bits (194), Expect = 5e-16
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 61
D +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 62 ISHLTWPVSKGLIQDWDEMEKL 83
I L +P+ G++ +WD+MEK+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 80.6 bits (190), Expect = 2e-15
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 61
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 62 ISHLTWPVSKGLIQDWDEMEKL 83
I L +P+ G++ +WD+MEK+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 80.6 bits (190), Expect = 2e-15
Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 61
+ +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 62 ISHLTWPVSKGLIQDWDEMEKL 83
I L +P+ G++ +WD+MEK+
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 77.8 bits (183), Expect = 1e-14
Identities = 71/336 (21%), Positives = 145/336 (43%), Gaps = 35/336 (10%)
Query: 68 PVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEILFESFTI 127
P+ +G + +WD +++W F + + + + L P + +EILF+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPAL-PDVSSEILFDYFGF 120
Query: 128 NSLYLARMQALALFASGRTTG----VVWESGYSCSYAAPVFEGFPLRNATFMSPVDGETL 183
++ L S + VV +SG+S + A G ++++ V G+ L
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKAL 180
Query: 184 SGHLQKLLATVGY-SFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHV---YT 239
+ KL V Y + ++++ K D C+V+ ++D+ ++ + + Y
Sbjct: 181 TN---KLKDWVSYRQLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYI 237
Query: 240 LPDGQEIF-------------------LGPERFQCPELMFRPNLGGLQCPSLVDLLCKSI 280
+PD F LG ERF PE++F P+ + + + + +SI
Sbjct: 238 MPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESI 297
Query: 281 ENCDLDYQRAFYENVVIAGGSTMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAV 340
C + A EN+++ GGS+ FPG +RL+ E+ + +L V D + + +
Sbjct: 298 CQCPEALRPALAENIIVIGGSSCFPGFRERLEREV-RSMLPAEYGLNVSNDVINPQTHS- 355
Query: 341 WNGGSIMASLSTMNGFLLSKEEYEDNGSDRVKHLFF 376
W+ G + + S + ++++++++ G FF
Sbjct: 356 WHCGQELLTASKVP--WINRKDWDERGDSLEFSNFF 389
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 77.4 bits (182), Expect = 2e-14
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGF--PEVYCGNEAIQKRG 61
D +V+D GS KAGFAG+ PRAVFPS VGR R G++ G + Y G+EA KRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 62 ISHLTWPVSKGLIQDWDEM 80
I L +P+ G++ +WD+M
Sbjct: 65 ILTLKYPIEHGIVTNWDDM 83
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 76.6 bits (180), Expect = 3e-14
Identities = 71/336 (21%), Positives = 144/336 (42%), Gaps = 35/336 (10%)
Query: 68 PVSKGLIQDWDEMEKLWHHIFYKGLLIPPEACSVVHSIHPLCPRKHQEKITEILFESFTI 127
P+ +G + +WD +++W F + + + + L P + +EILF+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPAL-PDVSSEILFDYFGF 120
Query: 128 NSLYLARMQALALFASGRTTG----VVWESGYSCSYAAPVFEGFPLRNATFMSPVDGETL 183
++ L S + VV +SG+S + A G ++++ V G+ L
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKAL 180
Query: 184 SGHLQKLLATVGY-SFTTKADNDILDQIKSDKCYVALDYDDEVESGKCSGDDKHV---YT 239
+ KL V Y + ++++ K D C+V+ ++D+ ++ + Y
Sbjct: 181 TN---KLKDWVSYRQLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYI 237
Query: 240 LPDGQEIF-------------------LGPERFQCPELMFRPNLGGLQCPSLVDLLCKSI 280
+PD F LG ERF PE++F P+ + + + + +SI
Sbjct: 238 MPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESI 297
Query: 281 ENCDLDYQRAFYENVVIAGGSTMFPGIVDRLQLELTKKLLKRSENWKVLVDAMTTRQFAV 340
C + A EN+++ GGS+ FPG +RL+ E+ + +L V D + + +
Sbjct: 298 CQCPEALRPALAENIIVIGGSSCFPGFRERLEREV-RSMLPAEYGLNVSNDVINPQTHS- 355
Query: 341 WNGGSIMASLSTMNGFLLSKEEYEDNGSDRVKHLFF 376
W+ G + + S + ++++++++ G FF
Sbjct: 356 WHCGQELLTASKVP--WINRKDWDERGDSLEFSNFF 389
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 50.4 bits (115), Expect = 2e-06
Identities = 66/284 (23%), Positives = 115/284 (40%), Gaps = 37/284 (13%)
Query: 117 ITEILFESFTINSLYLARMQALALFASGRTTGVVWESGYSCSYAAPVFEGFPLRNATFMS 176
IT+I+ E SL A F +V + G+S A P+ EG + N +
Sbjct: 9 ITKIVVEKIRCKSLMFMPSHVCATFPFNTQNALVVDIGHSECIAVPIIEGVTMLNEFESA 68
Query: 177 -PVDGETLSGHLQKLLATVGYSFTTKADNDIL---DQIKSDKC---------YVALDYDD 223
+ G L +++ + G + + D D C + LD +
Sbjct: 69 RSICGRQLERRVREQMEKYGQIAELNGERRAITENDWQDIDACKLIETLSLSLICLDKER 128
Query: 224 EVESGKCS----GDDKHVYTL------PDGQEIFLGPER-FQCP-ELMFRPNLGGLQCP- 270
K G+ + TL P+ +IF+ P F+ E+ F NL
Sbjct: 129 AENWTKWEASEEGEKPDIETLCKERLFPNNGKIFVVPPVVFETSTEIFFNENLNPTSFDL 188
Query: 271 SLVDLLCKSIENCDLDYQRAFYENVVIAGGSTMFPGIVDRLQLELTKKLLKRSENWKVLV 330
SL LL K + C +D ++ + N+++ GG + PG++ RL+ E+ +++ N K+ V
Sbjct: 189 SLPKLLHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEI--QVIDEKNNSKIAV 246
Query: 331 --------DAMTTRQFAVWNGGSIMASL-STMNGFLLSKEEYED 365
+ T F W G S++ SL T+ L+ EE+++
Sbjct: 247 IVKFYQFSEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEWKN 290
>AF036704-1|AAB88560.2| 293|Caenorhabditis elegans Hypothetical
protein ZK185.3 protein.
Length = 293
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 4 DAIGIVLDIGSKYTKAGFAGECFPRAVFPSTVGRFRQSGLVDGFPEVYCGNEAIQKRGIS 63
+ IG+ + +YT G+ F + S V + + G+ V NE + KR +
Sbjct: 212 EMIGLHGQLSHQYTMPGYRNRGFGAIIENSIVSKCFREGITP-VKSVELSNEPVLKRSLE 270
Query: 64 HLTWPVSK 71
H W + K
Sbjct: 271 HPLWEIVK 278
>Z72507-9|CAC35886.1| 282|Caenorhabditis elegans Hypothetical
protein F17C11.11 protein.
Length = 282
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 309 DRLQLELTKKLLKRSENWKVLVDAMTTRQFAVWNGGSIMASLSTMNGFLLSKEEYEDNGS 368
D + LEL + K ++ WKVL+ + W S ++ + + K+ +E +
Sbjct: 78 DAIGLELLDRAQKLNDGWKVLLIERVNLRSWYWPNWSYGSNPERFSEYFRIKDVHELSKD 137
Query: 369 DRVKH 373
D KH
Sbjct: 138 DAYKH 142
>AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical
protein W08F4.2 protein.
Length = 566
Score = 28.7 bits (61), Expect = 7.1
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 266 GLQCPSLVDLLCKSIENCDLDYQRAFYENVVIAGGSTMFPGIVD---RLQLELTKKLL 320
GL+ SL + CK IEN L EN+V+ G P + RLQL + K L
Sbjct: 374 GLKVVSLA-ISCKDIENYQLFKMFPCLENLVVLDGPISIPNLTQTFKRLQLTIGKVTL 430
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.139 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,886,560
Number of Sequences: 27539
Number of extensions: 435378
Number of successful extensions: 938
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 865
Number of HSP's gapped (non-prelim): 32
length of query: 376
length of database: 12,573,161
effective HSP length: 83
effective length of query: 293
effective length of database: 10,287,424
effective search space: 3014215232
effective search space used: 3014215232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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