Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002081-TA|BGIBMGA002081-PA|IPR011765|Peptidase M16,
N-terminal, IPR007863|Peptidase M16, C-terminal
(464 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46476| Best HMM Match : No HMM Matches (HMM E-Value=.) 221 1e-57
SB_40817| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.6e-36) 51 2e-06
SB_12959| Best HMM Match : Peptidase_M16_C (HMM E-Value=1e-14) 50 4e-06
SB_55523| Best HMM Match : Peptidase_M16_C (HMM E-Value=3.1e-13) 38 0.023
SB_12127| Best HMM Match : Endonuclease_NS (HMM E-Value=2.9e-35) 30 4.5
SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.5
SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.9
>SB_46476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 221 bits (540), Expect = 1e-57
Identities = 110/314 (35%), Positives = 177/314 (56%), Gaps = 1/314 (0%)
Query: 131 VAFLCRIITDLDLNDSSIETEKHNMCYELVDSDNDPKAVMFEYLHQTAFQGTPLAQSVIG 190
V L II + L ++ IE E+ + E+ + D + V+F++LH TA+QGT L ++++G
Sbjct: 36 VDILADIIQNSTLGEAEIERERGVILREMQEVDTQLEEVVFDHLHATAYQGTALGRTILG 95
Query: 191 PSKNIQNFDSQLLSSFMTDHYQPYKVCFATSGNVDHKEVVRIAETMCGKMVGDPTKQFGR 250
PS+N+++ Q L ++ HY ++ A +G V+H ++V++AE + +Q
Sbjct: 96 PSRNVKSITQQDLKDYINKHYSAPRMVLAAAGGVNHDDLVKLAENHFSGLRSTYEEQDKV 155
Query: 251 GPCRFTGSQIMYRDDSMPCAHVAIGFEVPGYGHEDYLKLLVMGCMMGAWDKS-QGGGNSN 309
PCRF+GS+I RDD MP AHVA+ E G+ H DY L+V ++G+WD+S G N
Sbjct: 156 EPCRFSGSEIRVRDDDMPLAHVAMSVEGCGWTHPDYFALMVANMLVGSWDRSFSAGKNIG 215
Query: 310 VPVLACAAASGLCESYEPFYFPYGDIGLWGVYYVGQPLVLEDMLNNIQDYWMKMCVSVHY 369
+ A + L ++ F Y D GLWG+Y+V + ++D + IQ WM++C S+
Sbjct: 216 SKLAQQIAQNNLAHNFMSFNTCYTDTGLWGIYFVCDKMKIDDTIYCIQHEWMRICTSITD 275
Query: 370 TDLERAKNLAKLKVAKMFDGTVNSSYDIGMQLMYFCGRKPLISQYELLSNIKPDSIREAA 429
++ RAKNL K + DG+ DIG Q++ + R PL + I ++++ A
Sbjct: 276 HEVARAKNLLKTNILMQLDGSTPICEDIGRQMLTYGRRIPLPEIDMRIEMIDAKTVKDVA 335
Query: 430 DKYLYDRCPAVACV 443
KY+YDRCPAV V
Sbjct: 336 TKYIYDRCPAVVGV 349
>SB_40817| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.6e-36)
Length = 888
Score = 51.2 bits (117), Expect = 2e-06
Identities = 31/144 (21%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 35 TKISLLPNGVRIATEQTQSPLACVSLFIEAGPRFETPENNGASHFLEHMAF-CGFKSMNQ 93
T ++ LPNG+++A+E++ + V + I+ G R+E NG +H +E MAF K +
Sbjct: 417 THVTTLPNGIKVASEESFGQFSTVGVVIDGGSRYEVDHPNGVTHVIEKMAFQSTAKFPSH 476
Query: 94 CEIEHNLLQMGAKINAETTKEIQRFVAICPSENAHEMVAFLCRIITDLDLNDSSIETEKH 153
+I L +G + + ++ + + V L + + ++ +K
Sbjct: 477 DDIMQELEPVGGMADCTSFRDAIVYGTSSFTSGLPLAVEVLSEAVMRPQITSQEVDEQKM 536
Query: 154 NMCYEL--VDSDNDPKAVMFEYLH 175
+ +EL ++ DP+ ++ + +H
Sbjct: 537 LVQFELENLEMRLDPEPILTDMVH 560
Score = 37.5 bits (83), Expect = 0.023
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 16/144 (11%)
Query: 178 AFQGTPLAQSVIGPSKNIQNFDSQLLSSFMTDHYQPYKVCFATSGNVDHKEVVRIAETMC 237
A++ L + P +N+ + + + FM +YQP ++ A NVDH+++V + +
Sbjct: 616 AYRNNTLGFPKLCPPQNLPVINRETIMEFMKTYYQPDRMVIA-GVNVDHEQLVELTKKHF 674
Query: 238 GKMVGDPTKQFGRGP-----CRFTGSQIM-----YRDDSMP-----CAHVAIGFEVPGYG 282
T+ P ++TG I R + P AHV+IG E Y
Sbjct: 675 TDKPSWHTEGASVTPPDHSIAQYTGGIITDHTAEPRVNPGPTPLPELAHVSIGLESTSYD 734
Query: 283 HEDYLKLLVMGCMMGAWDKSQGGG 306
D+ V+ +MG GG
Sbjct: 735 DPDFFAFTVLNMLMGGGGSFSAGG 758
>SB_12959| Best HMM Match : Peptidase_M16_C (HMM E-Value=1e-14)
Length = 593
Score = 50.0 bits (114), Expect = 4e-06
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 36 KISLLPNGVRIATEQTQSPLACVSLFIEAGPRFETPENNGASHFLEHMAF 85
+++ L NG+++A+ +T SP++ V LF +AG R+ET N G +H L + A+
Sbjct: 31 QVTTLDNGLKVASLETYSPISRVGLFFDAGSRYETDSNLGITHMLRNAAY 80
Score = 32.3 bits (70), Expect = 0.85
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 332 YGDIGLWGVYYVGQPLVLEDMLNNIQDYWMKMCV-SVHYTDLERAKNLAKLKVAKMFDGT 390
Y D GL+G Y++ P +E ++ + K+ V +L RAKN K + +
Sbjct: 298 YSDSGLFGCYFIASPAEIEKVMKASLGQFAKVAKGEVSDDELLRAKNQLKASLLMNNESG 357
Query: 391 VNSSYDIGMQ 400
+ DIG Q
Sbjct: 358 QTNFEDIGAQ 367
>SB_55523| Best HMM Match : Peptidase_M16_C (HMM E-Value=3.1e-13)
Length = 209
Score = 37.5 bits (83), Expect = 0.023
Identities = 50/192 (26%), Positives = 76/192 (39%), Gaps = 26/192 (13%)
Query: 270 AHVAIGFEVPGYGHEDYLKLLVMGCMMGAWDKSQGGGNSNVPVLACAAASGLCESYEPFY 329
AHV+IG E Y D+ V+ +MG GGG+ + A G+ Y Y
Sbjct: 19 AHVSIGLESTSYDDPDFFAFTVLNMLMG------GGGSFS----AGGPGKGM---YSRLY 65
Query: 330 FPYGDIGLWGVYYVGQPLVLEDMLNNIQDYWMKMCV--SVHYTDLE--RAKNLAKLKVAK 385
+ W +Y ++ D M C+ S H T +E RAK + +
Sbjct: 66 LNVLNKYHW-IYSATA------YNHSYSDSGM-FCIHASAHPTQVELARAKKQLQSMLMM 117
Query: 386 MFDGTVNSSYDIGMQLMYFCGRKPLISQYELLSNIKPDSIREAADKYLYDRCPAVACVGP 445
+ V DIG Q++ R+ YE + N+ D I + + L + P+VA G
Sbjct: 118 NLESRVIVFEDIGRQVLGLGERRSAGELYECIENVTMDDILRVSSRMLASK-PSVAAFGN 176
Query: 446 TEGMPDYTKIRA 457
+P Y I A
Sbjct: 177 LTFLPKYEDISA 188
>SB_12127| Best HMM Match : Endonuclease_NS (HMM E-Value=2.9e-35)
Length = 1577
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 194 NIQNFDSQLLSSFMTDHYQPYKVCFATSGNVDHKEVVRIAETMCGKMVGDP------TKQ 247
+++ DS + +TD+Y Y+ C+ S + T+CGK DP T
Sbjct: 459 DVKTSDSGCGDTSITDNYYCYR-CYNLSTRSVGSGEFDVRNTVCGKCTNDPKRSLKRTHS 517
Query: 248 FGRGPCRFT 256
G G CR T
Sbjct: 518 VGVGSCRVT 526
>SB_7914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 55 LACVSLFIEAGPRFETPENNGASHFLEHMAFCGF-KSMNQCEIEHNLLQMGAKINAETTK 113
LA +L I G + + G +HFLEHM F G K ++ + + + G NA T
Sbjct: 172 LAAAALCIGTGSFSDPDDIPGLAHFLEHMVFMGSEKYPDENSFDAFIKKHGGNSNAFTDC 231
Query: 114 E 114
E
Sbjct: 232 E 232
>SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1249
Score = 29.1 bits (62), Expect = 7.9
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 289 LLVMGCMMGAWDKSQGGGNSNVPVLACAAASGLCESYEPFYF 330
L V CM AWD+ G S++ V C A CES PF F
Sbjct: 772 LPVCVCMFDAWDRLPGNDYSSI-VCECELA---CESACPFVF 809
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.137 0.432
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,458,395
Number of Sequences: 59808
Number of extensions: 709161
Number of successful extensions: 1204
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1193
Number of HSP's gapped (non-prelim): 11
length of query: 464
length of database: 16,821,457
effective HSP length: 85
effective length of query: 379
effective length of database: 11,737,777
effective search space: 4448617483
effective search space used: 4448617483
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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