Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002080-TA|BGIBMGA002080-PA|IPR000210|BTB, IPR007087|Zinc
finger, C2H2-type, IPR013069|BTB/POZ
(370 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 39 5e-05
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 37 3e-04
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 37 3e-04
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 35 8e-04
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 35 0.001
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 35 0.001
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 25 0.87
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 2.0
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 22 6.1
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 39.1 bits (87), Expect = 5e-05
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 252 CPNCHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVH 298
C C+R F YNL +H R D R CDIC K R LR H
Sbjct: 82 CKYCNRQFTKSYNLLIHERTHTDER--PYSCDICGKAFRRQDHLRDH 126
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 36.7 bits (81), Expect = 3e-04
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 251 KCPNCHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVHKYHHRKQAAYLA 310
+C +C++ F+ NL H+R + E +C +C +R S + H H + Y
Sbjct: 23 RCIDCNKSFSQAANLTAHVRTH--SGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRC 80
Query: 311 QL 312
+L
Sbjct: 81 RL 82
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 36.7 bits (81), Expect = 3e-04
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 251 KCPNCHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVHKYHHRKQAAYLA 310
+C +C++ F+ NL H+R + E +C +C +R S + H H + Y
Sbjct: 279 RCIDCNKSFSQAANLTAHVRTH--SGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRC 336
Query: 311 QL 312
+L
Sbjct: 337 RL 338
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 282 CDICQKRMRNPSCLRVHKYHHRKQAAY 308
C IC K PS L+ H H + Y
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKPY 278
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 35.1 bits (77), Expect = 8e-04
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 230 HSVLVLPETKEAGWNCKTGG--VKCPNCHRFFANRYNLKVHI---RDKHDTREGTLQCDI 284
H VL + + TG KC C R F + NLK H+ R K R QC +
Sbjct: 141 HRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRV-LHQCPV 199
Query: 285 CQKRMRNPSCLRVHKYHHRKQAAYLAQLTTQGDQMK 320
C K+ N L+ H H + L Q ++K
Sbjct: 200 CHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVK 235
Score = 25.8 bits (54), Expect = 0.50
Identities = 37/191 (19%), Positives = 75/191 (39%), Gaps = 18/191 (9%)
Query: 152 PGGEDTIATETLAETSDSASVKEETVRSPLKRLLKNTPNKNASVKKKPRPVNDSPTHPEN 211
PGG+ + E + + ++ S K ++ PL N S + VN P+ +
Sbjct: 18 PGGDHS---ENMQDEPENLSNKSNSITVPLSISTGQRLPANFSFGQ----VNSPPSSTSS 70
Query: 212 TDYA-YDSEPLIDFDND--LFHSVLVLPETKEAGWNCKTGGVKCPNCHRFFANRYNLKVH 268
+ + P+ID D ++ ++L P + + W K + N++
Sbjct: 71 GSLGQFPATPVIDPAKDPAIYSNLLPRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHK 130
Query: 269 IRDKHDTREGTLQCDICQKRMRNPSCLRVHKYHHRKQAAYLAQLTTQGDQMKQVVQNMVG 328
+ D + QC IC + + S L++H H + + ++ + K ++ +G
Sbjct: 131 LSDPN-------QCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMG 183
Query: 329 AKWRADPGLGV 339
RA P + V
Sbjct: 184 VH-RAKPPMRV 193
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 34.7 bits (76), Expect = 0.001
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 251 KCPNCHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVHKYHHRKQAAY 308
+C CH+ F ++LK H+R H T E +C+ C ++ + LR H H + Y
Sbjct: 11 ECQECHKRFTRDHHLKTHMR-LH-TGERPYRCEHCDRQFVQVANLRRHLRVHTGERPY 66
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 271 DKHDTREGTLQCDICQKRMRNPSCLRVHKYHHRKQAAY 308
++ T E +C C KR L+ H H + Y
Sbjct: 1 ERTHTGEKPFECQECHKRFTRDHHLKTHMRLHTGERPY 38
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 34.7 bits (76), Expect = 0.001
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 251 KCPNCHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVHKYHHRKQAAY 308
+C CH+ F ++LK H+R H T E +C+ C ++ + LR H H + Y
Sbjct: 164 ECQECHKRFTRDHHLKTHMR-LH-TGERPYRCEHCDRQFVQVANLRRHLRVHTGERPY 219
Score = 31.9 bits (69), Expect = 0.008
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 234 VLPETKEAGWNCKTGGVKCPNCHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPS 293
V PE K++ + C C+R F ++ L+ H ++ T E +C C KR
Sbjct: 122 VSPEVKDSS---RDRPFTCEVCNRSFGYKHVLQNH--ERTHTGEKPFECQECHKRFTRDH 176
Query: 294 CLRVHKYHHRKQAAY 308
L+ H H + Y
Sbjct: 177 HLKTHMRLHTGERPY 191
Score = 30.7 bits (66), Expect = 0.018
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 252 CPNCHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVHKYHHR 303
C +C F++ LK H+ T E +CD C+ R R R H HH+
Sbjct: 221 CEHCSMKFSDSNQLKAHVLIH--TNEKPFECDKCRGRFRR----RHHLVHHK 266
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 25.0 bits (52), Expect = 0.87
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 6/114 (5%)
Query: 253 PNCHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVHKYHHRKQAAYLAQL 312
P C + + +LK H+R R C KR L+ H H + + +
Sbjct: 320 PGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPI 379
Query: 313 TT----QGDQMKQVVQNMVGAKWRADPGLGVDFREYENSQSSMGNKWRSETALS 362
+ D + + V+ G + D ENSQS + N S +++
Sbjct: 380 CNKRFMRSDHLAKHVKTHNGNGKKGSSDSCSD--SEENSQSDITNNVNSPASMN 431
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 219 EPLIDFDNDLFHSVLVLPETKE----AGWNCKTG 248
+P D DN+L+ V L +TK GW G
Sbjct: 687 DPWADLDNNLYERVTSLKDTKAILSLGGWTDSAG 720
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 22.2 bits (45), Expect = 6.1
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 155 EDTIATETLAETSDSASVKEETVRSPLKRLLKNTPNKNASVKKKPRPVNDSPTHPENTD 213
ED E D S+++ + + L+ + ++ A+ K KPRP S PE D
Sbjct: 215 EDVPGCEDYYGDLDLKSIRKSELLAGLQSSGSSRSHQPAT-KSKPRPAPASRNAPEPAD 272
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.316 0.132 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,748
Number of Sequences: 317
Number of extensions: 3639
Number of successful extensions: 31
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 17
length of query: 370
length of database: 114,650
effective HSP length: 58
effective length of query: 312
effective length of database: 96,264
effective search space: 30034368
effective search space used: 30034368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)
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