Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002080-TA|BGIBMGA002080-PA|IPR000210|BTB, IPR007087|Zinc
finger, C2H2-type, IPR013069|BTB/POZ
(370 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 36 0.009
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 35 0.021
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 32 0.15
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 31 0.20
SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr... 29 0.80
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 1.8
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 28 1.8
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 28 2.4
SPBP4H10.05c |spe2||S-adenosylmethionine decarboxylase proenzyme... 28 2.4
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 27 3.2
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 27 4.2
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 27 5.6
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 27 5.6
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 26 7.4
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 26 9.8
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 26 9.8
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 26 9.8
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 26 9.8
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 26 9.8
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 35.9 bits (79), Expect = 0.009
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 252 CPNCHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVHKYHHRKQAAYLA 310
CP C + F +L+ HIR H T E C IC KR LR H+ H + LA
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLH-TSEKPFVC-ICGKRFSRRDNLRQHERLHVNASPRLA 481
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 34.7 bits (76), Expect = 0.021
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 40 GQY--VHAHKLILSVCSPYFKELF-KMNPCEHPIVILKDVELQELRQLLQFMY 89
GQY V AHK L+ S YFK F K+ P EH I + +E +L+++Y
Sbjct: 173 GQYGRVFAHKFYLAARSSYFKSKFSKLGPSEHEIEVKHFA--KEFESILRYLY 223
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 31.9 bits (69), Expect = 0.15
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 162 TLAETSDSASVKEETVRSPLKRLLKNTP-NKNASVKKKPRPVNDSPTHPENTDY 214
TL E +D+ + + +++ L RL + N ++VK KP+ + + PEN DY
Sbjct: 229 TLREENDTLAAQNLDLQTQLDRLQRELDTNIRSNVKSKPKKIVTTGGIPENNDY 282
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 31.5 bits (68), Expect = 0.20
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 255 CHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVHKYHH 302
C++ F YNLK H+ + H T QC IC+K R H+ H
Sbjct: 577 CNKRFTRAYNLKSHM-NTH-TNYRPFQCSICKKSFARQHDKRRHEQLH 622
>SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 178
Score = 29.5 bits (63), Expect = 0.80
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 152 PGGEDTIATETLAETSDSASVKEETVRSPLKRLLKNTPNKNASVKKKPRPVNDSPTHPEN 211
P G + + + ++ K+ETV SP ++LL T N+ S+ K + N + ++
Sbjct: 92 PAGPTKHSLDENEKDKENKKSKKETVSSPAEQLLALTQNQEISLYKLLKKYNKQASKEDS 151
Query: 212 TD 213
D
Sbjct: 152 LD 153
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 155 EDTIATETLAETSDSASVKEETVRSPLKRLLKNTPNKNASVKKKPRPVNDSPTHPE 210
+D+ + LAE S++ +V E S K+ KN NKN V +SP P+
Sbjct: 33 QDSPQNDELAEKSENLAVSSEKTTSKKKKGKKNKGNKN-QVSDDESQELESPQGPK 87
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 28.3 bits (60), Expect = 1.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 281 QCDICQKRMRNPSCLRVHKYHHRKQAA 307
+C++C KR +N + L+ H+ H Q +
Sbjct: 400 RCEVCSKRYKNLNGLKYHRTHSHLQVS 426
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 255 CHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVHKYHHRKQAAYLAQ 311
C++ A +YN++ HI+ R +CD+C+ L+ H H Y+ +
Sbjct: 450 CNKRIARKYNVESHIQTHLSDR--PYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE 504
>SPBP4H10.05c |spe2||S-adenosylmethionine decarboxylase proenzyme
Spe2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 11 WNDFHSNLSQSFHALLEGEDLVDVTLAAGGQYVHAHKLILSVC 53
W+D + +++ E++ L+ +V AHK+IL C
Sbjct: 57 WDDMLAQAQCKVLSVVNSEEIDAYLLSESSMFVFAHKIILKTC 99
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 174 EETVRSPLKRLLKNTPNKNASVKKK 198
E +R+P+ K T NK+A++K+K
Sbjct: 1105 EHAIRTPVSSFAKQTTNKHANLKQK 1129
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 161 ETLAETSDSASVKEETVRSPLKRLLKNTPNKNASVKKKPRP 201
ET S+ +KE+ S + NTP NAS+KK P
Sbjct: 237 ETETPPPSSSKLKEDYKDSKREMKRSNTPWSNASIKKNEVP 277
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 26.6 bits (56), Expect = 5.6
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 251 KCPNCHRFFANRYNLKVHIRDKHDTREGTLQCDI--CQKRM-RNPSCLRVHKYHHRK 304
+CP C R F + + HIR T E +C C+KR R +R + H RK
Sbjct: 5 ECPFCKRVFHRQEHQVRHIRS--HTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 33 DVTLAAGGQYVHAHKLILSVCSPYFKEL 60
DVT+ G H+HK IL S + ++L
Sbjct: 620 DVTIYCGTSMFHSHKFILCARSSFLRKL 647
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 155 EDTIATETLAETSDSASVKEETVRSPLKRLLKNTPNKNASVKK 197
+DT + LA +SD++ K E +S L + N +A+ K
Sbjct: 149 KDTATSRPLALSSDTSYQKSEKAKSEKSPFLSTSKNSDANYSK 191
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 162 TLAETSDSASVKEETVRSPLKRLLKNTPNK 191
T++ TS+ EE V P K+L + P+K
Sbjct: 1652 TISRTSEKRMKNEEFVEPPSKKLANSEPSK 1681
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 25.8 bits (54), Expect = 9.8
Identities = 14/54 (25%), Positives = 22/54 (40%)
Query: 255 CHRFFANRYNLKVHIRDKHDTREGTLQCDICQKRMRNPSCLRVHKYHHRKQAAY 308
C + F + +LK+H R + + + D C + L H HRK Y
Sbjct: 60 CSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPY 113
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 25.8 bits (54), Expect = 9.8
Identities = 22/116 (18%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 99 ELSGFLHTAELLQVKGLTGGREKSESPPPVTEEKQVTKXXXXXXXXXXXXXWVPGGEDTI 158
E+S + L +K RE +E PPP +++ T V +++
Sbjct: 9 EISSKFASLGLGSLKSTPKARETTEPPPPSSQQPPSTPNGKEAASPSALKQNVRPSLNSV 68
Query: 159 --ATETLAETSDSASVKEETVRSPLKRLLKNTPNKNASVKKKPRPVNDSPTHPENT 212
++ + S++V ++ + K ++ + PN+ ++ P P N+ H +T
Sbjct: 69 QQTPASIDAVASSSNVSLQSQQPLSKPVVSSKPNQTTAM---PPPSNNPSRHVSST 121
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 25.8 bits (54), Expect = 9.8
Identities = 9/24 (37%), Positives = 18/24 (75%)
Query: 303 RKQAAYLAQLTTQGDQMKQVVQNM 326
R+ + YLA+L Q ++ +++V+NM
Sbjct: 5 RENSVYLAKLAEQAERYEEMVENM 28
>SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1150
Score = 25.8 bits (54), Expect = 9.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 155 EDTIATETLAETSDSASVKEETVRSPLKRLLKNTPNKNASVKKKPRPVNDSPTH 208
+ T+ A TS + E + S + +NTP AS K+K +P+ T+
Sbjct: 1050 DPTLFYNNAAWTSKELYKRCEEIISQMSLDERNTPKHTASTKRKRQPIRRVTTN 1103
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.132 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,717,048
Number of Sequences: 5004
Number of extensions: 72338
Number of successful extensions: 247
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 228
Number of HSP's gapped (non-prelim): 26
length of query: 370
length of database: 2,362,478
effective HSP length: 74
effective length of query: 296
effective length of database: 1,992,182
effective search space: 589685872
effective search space used: 589685872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
- SilkBase 1999-2023 -