Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002078-TA|BGIBMGA002078-PA|IPR005833|Haloacid
dehydrogenase/epoxide hydrolase, IPR011949|HAD-superfamily hydrolase,
subfamily IA, REG-2-like, IPR006439|HAD-superfamily hydrolase,
subfamily IA, variant 1, IPR005834|Haloacid dehalogenase-like
hydrolase
(238 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28682| Best HMM Match : Hydrolase (HMM E-Value=1.2e-19) 101 5e-22
SB_33016| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_18334| Best HMM Match : CSE2 (HMM E-Value=4.9) 33 0.28
SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_1419| Best HMM Match : CSE2 (HMM E-Value=6.1) 31 0.64
SB_14987| Best HMM Match : TPR_2 (HMM E-Value=0.0065) 30 1.9
SB_10954| Best HMM Match : Activin_recp (HMM E-Value=0.12) 29 4.5
SB_57924| Best HMM Match : PG_binding_1 (HMM E-Value=3.5) 29 4.5
SB_45911| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_5938| Best HMM Match : Activin_recp (HMM E-Value=0.28) 29 4.5
SB_3171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_2279| Best HMM Match : PG_binding_1 (HMM E-Value=3.5) 29 4.5
SB_36035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 28 7.8
SB_53217| Best HMM Match : RVT_1 (HMM E-Value=3.1e-13) 28 7.8
>SB_28682| Best HMM Match : Hydrolase (HMM E-Value=1.2e-19)
Length = 219
Score = 101 bits (242), Expect = 5e-22
Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Query: 5 QYYTKIARTYGYRGSESDAQNKMRENFKMMWEQHPNFGR-NSILWEEWWRQVVKLTLQDH 63
QY GY+ S ++ + R+ +KM W ++PNFG + I ++WW +VV+ T +
Sbjct: 23 QYAKSAMEQLGYQLSAANIDKEFRKAYKMYWIKYPNFGAAHRITSKQWWGKVVRKTFDGN 82
Query: 64 LPVGADTRSLGNTLINDFKTSKCWDVAAGSDTLLQXXXXXXXXXXXXSNSDPRLYDILQN 123
+ + + L N F T W+V +L SN D RL IL +
Sbjct: 83 IH-SEEIEAFSVHLYNHFATGDPWEVFPEVMHVLTQLKGEEVTLGVISNFDERLEQILDS 141
Query: 124 LGLSKYFDFILTSYDCGFSKPDSRIFQEALLRCKEITKASESLHIGDDLEKDYIGARESG 183
L L ++F FILTS KP IF+ AL +K E+LH+GD+LE D +GA +G
Sbjct: 142 LKLREFFSFILTSRKVDVCKPSPEIFRLALKMSGVHSK--EALHVGDNLELDVLGASSAG 199
Query: 184 WHALLISNNET 194
+ +LL++ ++
Sbjct: 200 FSSLLLNRQDS 210
>SB_33016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 111 SNSDPRLY-DILQNLGLSKYFDFILTSYDCGFSKPDSRIFQEALLRCKEITKASES-LHI 168
+NSDP + + L+ + KYFD I+ S + +KP IFQ A C I A E + I
Sbjct: 127 TNSDPVIQKEKLEFCKVEKYFDAIIISGEQPEAKPCVSIFQTA---CDAIGLAPEDCVMI 183
Query: 169 GDDLEKDYIGARESGWHALL-ISNNETKIPPAK 200
GD+L D G R++G A + + + K P K
Sbjct: 184 GDNLVDDIQGGRDAGVRATVWVRGADAKGPSEK 216
>SB_18334| Best HMM Match : CSE2 (HMM E-Value=4.9)
Length = 296
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 50 EWWRQVVKLTLQ--DHLPVGADTRSLGNTLINDFKTSKCWDVAAGSDTLLQ 98
EWWR + L+ + V D +SL +ND+ + CWD A TL++
Sbjct: 76 EWWRHIDNLSQRRRSSAKVSLDEQSLVE--LNDYFANLCWDTAYEQPTLVE 124
>SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 50 EWWRQVVKLTLQ--DHLPVGADTRSLGNTLINDFKTSKCWDVAAGSDTLLQ 98
EWWR + L+ + V D +SL +ND+ + CWD A TL++
Sbjct: 110 EWWRHIDNLSQRRRSSAKVSLDEQSLVE--LNDYFANLCWDTAYEQPTLVE 158
>SB_1419| Best HMM Match : CSE2 (HMM E-Value=6.1)
Length = 270
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 50 EWWRQVVKLTLQ--DHLPVGADTRSLGNTLINDFKTSKCWDVAAGSDTLLQ 98
+WWR + L+ + V D +SL +ND+ + CWD A TL++
Sbjct: 50 DWWRHIDNLSQRRRSSAKVSLDEQSLVE--LNDYFANLCWDTAYEQPTLVE 98
>SB_14987| Best HMM Match : TPR_2 (HMM E-Value=0.0065)
Length = 1171
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 2 VPSQYYTKIARTYG----YRGSESDAQNKMRENFKMM---WEQHPNFGRNSILWEEWWR 53
V +YY +IA Y Y+ ES+ Q + E+ + W+ N R S +WEE +R
Sbjct: 410 VAERYYHQIAHHYAQVQEYKEMESEGQLRQAEHHYLEAKDWKAAVNMYRTSDMWEEAYR 468
>SB_10954| Best HMM Match : Activin_recp (HMM E-Value=0.12)
Length = 167
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 36 EQHPNFGRNSILWEEWWRQ 54
+QHPN + SI ++ WW +
Sbjct: 94 QQHPNLDKESIAYKTWWAE 112
>SB_57924| Best HMM Match : PG_binding_1 (HMM E-Value=3.5)
Length = 581
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 36 EQHPNFGRNSILWEEWWRQ 54
+QHPN + SI ++ WW +
Sbjct: 250 QQHPNLDKESIAYKTWWAE 268
>SB_45911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 36 EQHPNFGRNSILWEEWWRQ 54
+QHPN + SI ++ WW +
Sbjct: 89 QQHPNLDKESIAYKTWWAE 107
>SB_5938| Best HMM Match : Activin_recp (HMM E-Value=0.28)
Length = 287
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 36 EQHPNFGRNSILWEEWWRQ 54
+QHPN + SI ++ WW +
Sbjct: 89 QQHPNLDKESIAYKTWWAE 107
>SB_3171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 851
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 36 EQHPNFGRNSILWEEWWRQ 54
+QHPN + SI ++ WW +
Sbjct: 737 QQHPNLDKESIAYKTWWAE 755
>SB_2279| Best HMM Match : PG_binding_1 (HMM E-Value=3.5)
Length = 351
Score = 28.7 bits (61), Expect = 4.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 36 EQHPNFGRNSILWEEWWRQ 54
+QHPN + SI ++ WW +
Sbjct: 20 QQHPNLDKESIAYKTWWAE 38
>SB_36035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 28.3 bits (60), Expect = 5.9
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 36 EQHPNFGRNSILWEEWWRQ 54
+QHPN + SI ++ WW +
Sbjct: 141 QQHPNLDKESIAFKTWWAE 159
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 113 SDPRLYDILQNLGLSKYFDFILTSYDCGFSKPDSRIFQEALL 154
S+ +L + LQ LG+ K FD + G S P +F A+L
Sbjct: 241 SEFKLNEALQELGMKKMFDQAAADF-TGISLPPEHLFVSAVL 281
>SB_53217| Best HMM Match : RVT_1 (HMM E-Value=3.1e-13)
Length = 436
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 156 CKEITKASESLHIGDDLEKDYIGARESGWHALLISNNETKIPPAKDHVFANIDLLSIAIS 215
CKE S+ +D ++ RE+ A+ ++ N +IP D A D+ +
Sbjct: 81 CKETKYVEVSVDNDEDESLEFFSTREASSKAVTVTVNGKEIPMEVDTGAARTDVFGTGL- 139
Query: 216 QNKLKTFE 223
K+K F+
Sbjct: 140 -GKIKEFQ 146
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.135 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,572,571
Number of Sequences: 59808
Number of extensions: 287666
Number of successful extensions: 561
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 550
Number of HSP's gapped (non-prelim): 15
length of query: 238
length of database: 16,821,457
effective HSP length: 80
effective length of query: 158
effective length of database: 12,036,817
effective search space: 1901817086
effective search space used: 1901817086
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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