GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002077-TA|BGIBMGA002077-PA|IPR005079|Peptidase C45,
acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
         (363 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.85 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   7.9  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 36  RTFSSIIKSFISNYANLRDFEREYKTDTGRNAYDKTLANMEKRFPYYV 83
           R +    + F+  Y + +  +R+ +       YD+T   M   F YYV
Sbjct: 204 RGYEDFRRDFLRTYWSAKR-QRDIRFQIATGRYDETRGTMLSHFAYYV 250


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 60  KTDTGRNAYDKTLANMEKRFPYYVKEIRGVADGANV 95
           KT  G    D+  A   ++F   V+E+RG     N+
Sbjct: 178 KTVAGDKVLDENAAEHREQFVSLVRELRGAFKAENL 213


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 40  SIIKSFISNYANLRDFEREYKTDTGRNAYDKTLANMEK 77
           S+    I  +A L+D +    +D     YD+ +A  EK
Sbjct: 549 SLCTHIIYAFATLKDHKLAEASDKDPEMYDRVVALREK 586


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.137    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,040
Number of Sequences: 317
Number of extensions: 3906
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 363
length of database: 114,650
effective HSP length: 58
effective length of query: 305
effective length of database: 96,264
effective search space: 29360520
effective search space used: 29360520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)