Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002077-TA|BGIBMGA002077-PA|IPR005079|Peptidase C45,
acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
(363 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0855 - 6666854-6666969,6667107-6667230,6667679-6667849,666... 39 0.007
12_01_0104 - 816185-816602,816710-816817,816910-817037 33 0.36
11_01_0104 - 781471-781888,781994-782101,782195-782511 33 0.36
09_02_0232 - 6111282-6111984,6112031-6112074 31 1.1
08_02_0772 + 21035762-21037567 29 5.8
06_01_0906 + 6990892-6991615,6992480-6992679,6992822-6993002,699... 29 5.8
02_03_0141 - 15649188-15649274,15649376-15649421,15650476-156506... 29 7.7
02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,323... 29 7.7
>01_01_0855 -
6666854-6666969,6667107-6667230,6667679-6667849,
6668171-6668276,6668356-6668532,6669213-6669442
Length = 307
Score = 38.7 bits (86), Expect = 0.007
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Query: 125 CSSVAFKNPQHTILGHTEDAFTETLNHFYIMSAHIIPTPEDREHGAVEERFSSLCYAGHM 184
CS V I H EDA L H Y++ A +P+ F++ YAG +
Sbjct: 109 CSDVLIVGESAAIAAHNEDANVALLGHTYVVKA---TSPDG------SSSFTAYTYAGEL 159
Query: 185 PGYTMGYNENGMVFSINTLS 204
P G+N NG+ S +S
Sbjct: 160 PTCAFGFNSNGVRVSSPAMS 179
>12_01_0104 - 816185-816602,816710-816817,816910-817037
Length = 217
Score = 33.1 bits (72), Expect = 0.36
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 161 PTPEDREHGAVEERFSSLCYAGHMPGYTMGYN-ENGMVFSINTLSPL 206
PT E H +ERF +LC +MP Y + + E F +N SPL
Sbjct: 151 PTLEHEAHEVQDERFENLCMVQNMPEYLIDFELERAFEFIVN--SPL 195
>11_01_0104 - 781471-781888,781994-782101,782195-782511
Length = 280
Score = 33.1 bits (72), Expect = 0.36
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 161 PTPEDREHGAVEERFSSLCYAGHMPGYTMGYN-ENGMVFSINTLSPL 206
PT E H +ERF +LC +MP Y + + E F +N SPL
Sbjct: 214 PTLEHEAHEVQDERFENLCMVQNMPEYLIDFELERAFEFIVN--SPL 258
>09_02_0232 - 6111282-6111984,6112031-6112074
Length = 248
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 222 LLSAKSFPDAERILRDEGLGIGNGFSVNMIWTDTW-GDTKLYNVEVAPDLKGDRSLVHVQ 280
+++A DAE L+ + +G ++ ++ T GDT L++ A +L R L+H++
Sbjct: 73 MVAASGSDDAENFLKSADIICRSGRAMELLVTPNCNGDTPLHSAATAGNLAVVRKLIHLR 132
Query: 281 KYDQD 285
K D
Sbjct: 133 KCTAD 137
>08_02_0772 + 21035762-21037567
Length = 601
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 203 LSPLLLKPGNTPRTFITRKLLSAKSFPDAERIL-RDEGLG-IGNGFSVNMI 251
L L L P P TF +L + PDA R L R LG GN FS++++
Sbjct: 84 LHHLALAPETLPSTFRLNAILRSLRGPDALRFLRRARALGRRGNAFSLSIV 134
>06_01_0906 +
6990892-6991615,6992480-6992679,6992822-6993002,
6993855-6994046,6994492-6994724,6995537-6995638,
6995776-6995826,6996234-6996338,6997287-6997353,
6997946-6997962
Length = 623
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 99 QLFLLQMDDLIGTINDNHVPRNDTGGCSSVAFKNPQHTILGHTEDAF-TETLNHF 152
+L LQ+D I + N ND G C +AF++ +H + + T +NHF
Sbjct: 303 ELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVINHF 357
>02_03_0141 -
15649188-15649274,15649376-15649421,15650476-15650606,
15652168-15652254,15652470-15652538,15652699-15652845,
15652923-15653003,15653122-15653223,15653392-15653429,
15653590-15653692,15653766-15653888,15654872-15654951,
15655356-15655504,15657794-15658010,15658379-15658448,
15659167-15659313,15659430-15659486,15663270-15663436,
15663479-15663569,15664044-15665081,15665580-15665695,
15666104-15667039,15667108-15667170,15667416-15667970,
15668293-15668305
Length = 1570
Score = 28.7 bits (61), Expect = 7.7
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 49 YANLRDFEREYKTDTGRNAYDKTLANMEKRFPYYVKEIRGVADGANVPFYQLFLLQMDDL 108
YA + + ++E K R AY + +E + ++E R A V + + Q
Sbjct: 38 YAQMTNEDKENKLKRRREAYKRK--KIEDSYCISIQEKRA---RARVKYNSMEPEQKQAK 92
Query: 109 IGTINDNHVPRNDTGGCSSVAFKNP 133
I +N N R +T S+A +NP
Sbjct: 93 IAQVNANRAARRNTPSEDSIALENP 117
>02_01_0451 -
3237849-3238061,3238142-3238268,3238418-3238656,
3238937-3239151,3239569-3240031,3240562-3240715,
3241724-3241833,3242540-3242797,3242843-3242854,
3243492-3243545,3244202-3244312,3244390-3244545,
3244798-3245201,3245405-3245501,3246041-3246050,
3246097-3246164,3246652-3246762,3246874-3247074,
3247384-3247485,3247980-3248087,3248209-3248411,
3248563-3248680,3248774-3248854,3248958-3249500,
3249602-3249730
Length = 1428
Score = 28.7 bits (61), Expect = 7.7
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 188 TMGYNENGMVFSINTLSPLLLKPGNTPRTFITRKLLSAKSFPDAERILRDE 238
T GY E VF S L +KPG+ P T R ++ PD RD+
Sbjct: 632 TQGYREAKEVFKKKNSSKLGMKPGSKPGTTAVRAGTQGRN-PDTSSRGRDQ 681
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.137 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,630,235
Number of Sequences: 37544
Number of extensions: 445186
Number of successful extensions: 808
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 805
Number of HSP's gapped (non-prelim): 9
length of query: 363
length of database: 14,793,348
effective HSP length: 83
effective length of query: 280
effective length of database: 11,677,196
effective search space: 3269614880
effective search space used: 3269614880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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