Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002076-TA|BGIBMGA002076-PA|IPR001214|SET, IPR002893|Zinc
finger, MYND-type
(743 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.05 |set5||histone lysine methyltransferase Set5 |Schizo... 41 7e-04
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 38 0.007
SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr 2... 31 0.44
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 31 0.44
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 31 0.58
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 31 0.58
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 31 0.77
SPCC1494.09c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 29 1.8
SPCC4B3.12 |set9||histone lysine methyltransferase Set9|Schizosa... 29 2.3
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 29 3.1
SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 3.1
SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyc... 28 4.1
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 28 4.1
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 28 4.1
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 28 4.1
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 28 4.1
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 28 5.4
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 28 5.4
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 27 7.1
>SPCC1739.05 |set5||histone lysine methyltransferase Set5
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 319
Score = 40.7 bits (91), Expect = 7e-04
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 537 GIYPVGALFNHECYPAVTRYFEGR--KIVLRATRPLTPGEVVSENYGPHFMMRTLRERQR 594
G++ +G+ NH+C P V + R ++ + A R + GE + Y T ERQ+
Sbjct: 95 GMFLLGSRMNHDCSPNVKHTWNPRLDQVTVHAVRDIEAGEEILTTYIDLHKSHT--ERQK 152
Query: 595 ALACRYWFHCECTACKEDWPTMKQMNN 621
L + F C C+ C + ++++++
Sbjct: 153 ILLEHFGFKCYCSVCSVEERKIRKISD 179
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 546 NHECYPAVTRYFEGRKIVLRATRPLTPGEVVSENYGPHFMMRTLRERQRALACRYWFHCE 605
NH C P F+G + L + R + E + +Y + +++R++Q L +Y+F C
Sbjct: 193 NHSCDPNCQIIFDGAIVQLVSKRDIKKDEQLFISYIDIRLPKSIRQKQ--LLKKYFFSCY 250
Query: 606 CTACKEDWPT 615
C C+ D T
Sbjct: 251 CPRCENDHTT 260
>SPBC4C3.03 |||homoserine kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 338
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 186 GEATRAKVSYELAGRLLAKDEVAKTQLTKDIETLDYTVQSKRPPDKNATTLTGG 239
G + S +AG +LA +E+AK L+K ++ +DY + +R PD ++ GG
Sbjct: 95 GRGMGSSGSAAIAGVMLA-NEIAKLGLSK-LQMMDYVLMIERHPDNVMASMMGG 146
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 31.5 bits (68), Expect = 0.44
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 363 SDLETCLTIHSKYISNDIKTVEGSVLNDIEGVAKKSKMKSRKERLNRNKKSHKMSVEKND 422
S L+ T+ +K ND+ V + I + SK K ++ R N+ KKS K ++E
Sbjct: 182 SSLKDDKTVETK---NDVPEVSRPSTDTIGVSSALSKKKKKRNRKNQKKKSTKQNIEATT 238
Query: 423 RVDVMEDKL 431
D + + +
Sbjct: 239 ENDALSESI 247
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 31.1 bits (67), Expect = 0.58
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 384 EGSVLNDIEGVAKKSKMKSRKERLNRNKKSHKMSVEKNDRVDVMEDKLEDKNNFEEKLEL 443
E + N+ GV+++ K+ + N+ KK+ K + + + D L++K FEEK
Sbjct: 65 EAAAANNPPGVSEEKKVAIPNKNSNQQKKASKQNPQNSPETDA---NLQEKKIFEEK--- 118
Query: 444 KAAQVYSLCTHSDRRR 459
QV S+ +H D RR
Sbjct: 119 ---QV-SIFSHLDWRR 130
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 383 VEGSVLNDIEGVAKKSKM--KSRKERLNRNKKSHKMSVEKNDRVDVMEDKLEDKNNFE 438
++ +L D V+K+ K + ++++LN K +H+M KN+ V D ++ N E
Sbjct: 1027 IDAKLLYDCCQVSKREKAYKQLKQKKLNNAKDAHEMQESKNEETFVRNDVAQEDNFIE 1084
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 30.7 bits (66), Expect = 0.77
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 284 CLLSDYYGTHCLHCFRRLADCEESAPVW--CPKCSGVVFC-SIECRDTAVSSYHS 335
C SD G CL C + ADC S W C K S + C S + + SY S
Sbjct: 26 CTGSDIPGQPCLACQKAHADCHFSTTSWRACRKKSAPLHCPSTNGKTNVLPSYAS 80
>SPCC1494.09c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 157
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 350 SILSHIALRMVTQSDLETCLTIHSKYISNDIKTVEGSVLNDIEG 393
S+L + LR++ +L T TI K + + + V S L+D++G
Sbjct: 96 SLLDSLCLRLIQSGNLSTTDTIRLKSLMENCRMVVISKLSDVQG 139
>SPCC4B3.12 |set9||histone lysine methyltransferase
Set9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 441
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 546 NHECYPAVTRYFEGRKIVLRATRPLTPGEVVSENYGPHF 584
NH+C G++I LR R + PGE ++ Y ++
Sbjct: 186 NHDCNANCRFNTSGKRIWLRCVRDIKPGEEITTFYSSNY 224
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 425 DVMEDKLEDKNNFEEKLELKAAQ 447
D+++DK+ED+NN EK E A Q
Sbjct: 100 DLLKDKIEDQNNSLEKTEFIALQ 122
>SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 168
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 386 SVLNDIEGVAKKSKMKSRKERLNRNKKSHKMSVEKNDRVDVMEDKL---EDKNNFEE-KL 441
S+ +DI+ V ++ K+ K N + +S K E+N +D + + E K++ E+ K
Sbjct: 4 SLFSDIKDVVERDMKKNSKVVENSSARSLKNKTEENKTIDKHKSSVGPKEPKSSLEKPKA 63
Query: 442 ELKAAQVYSL 451
K Q Y L
Sbjct: 64 NRKRKQSYGL 73
>SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 381
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 527 SGSKPLYFAVGIYPVGALFNHECYPAVTRYFEGRKIVLRATRPLTPGEVVSENYGPH 583
+GSK + + P+ FNH I +++TR + GE + YGPH
Sbjct: 170 TGSKNTEDHLTLAPIFEYFNHSPEAQTALINTRGTITIKSTRRIDKGEQIFLCYGPH 226
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 357 LRMVTQSDLETCLTIHSKY--ISNDIKTVEGSVLND-IEGVAKKSKMKSRKER---LNRN 410
L + ++ + T H ++ +IK L IE + +K+K K KER L
Sbjct: 12 LSSIEMAEFHSTKTSHDQFEETEEEIKKRSPEELKQAIEALREKAKEKKEKERILALEEK 71
Query: 411 KKSHKMSVEKNDRVDVMEDKLEDKNNFEEKLELK 444
K ++K+ + ND K++D+ + +++
Sbjct: 72 KTNYKILQKSNDETAQAMRKMQDQARLRDLQKIR 105
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 411 KKSHKMSVEKNDRVDVMEDKLE 432
+K H + EKNDR+ V EDKL+
Sbjct: 139 EKIHDLLSEKNDRLTVHEDKLQ 160
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 395 AKKSKMKSRKERLNRNKKSHKMSVEKNDRVDVMEDKLEDKNNFEEKLE 442
+ KS K ++++N + ++ K R DV++D E+ E+KLE
Sbjct: 57 SNKSDSKLLSNQVSQNDNDARKNLRKRLRNDVLKDLAEEIQGCEKKLE 104
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 4 IYEEVDPIYAATCSDITLCSNSKGFFKGLADDLVSLAGEEWLNKFELVEDGK 55
+++ V PI++ D + S+ F KG+ +D + +A + + + L ED K
Sbjct: 302 VFKPVKPIFSDEDEDDDDLTASQPFSKGICNDSMQVAKKNFTEEIPLKEDEK 353
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 384 EGSVLNDIEGVAKKSKMKSRKERLNRNKKSHKMSVEKNDRVDVMEDKLEDKNNFEE 439
E SV N +G K+ K+ KE+ + K+ K+S + R ++ K+E + N E
Sbjct: 516 ETSVKNSPKGKNTKNG-KAEKEKPGKKSKAPKLSKAEQIRAEIAARKVEKEENKNE 570
>SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1163
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 388 LNDIEGVAK------KSKMKSRKERLNRNKKSH---KMSVEKNDRVDVMEDKLEDKNNFE 438
L DIE V+K + K+ +RK++LN KS+ ++ + +D +++ED L N +
Sbjct: 1038 LLDIEAVSKISSTDPRKKLAARKQKLNSAFKSNEEGRLLINDSDEDELIEDSLA---NAQ 1094
Query: 439 EKLELKAAQVYSLCTHSDRRRG 460
+ E+ + ++ RRG
Sbjct: 1095 QHAEVNRTYLEAVAGKESFRRG 1116
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 372 HSKYISNDIKTVEGSVLNDIEGVAKKSKMKSRKERLNRNKKSHKMSVEKN 421
H + ND+ ++ G N G+ KS+M S E + KK+ M E N
Sbjct: 1414 HRDILVNDLSSIIGESYNRAYGIMVKSQMLSELEEIIDYKKN--MQYENN 1461
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.133 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,242,827
Number of Sequences: 5004
Number of extensions: 130356
Number of successful extensions: 410
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 393
Number of HSP's gapped (non-prelim): 24
length of query: 743
length of database: 2,362,478
effective HSP length: 78
effective length of query: 665
effective length of database: 1,972,166
effective search space: 1311490390
effective search space used: 1311490390
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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