GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002076-TA|BGIBMGA002076-PA|IPR001214|SET, IPR002893|Zinc
finger, MYND-type
         (743 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           28   0.78 
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          27   2.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   4.1  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    25   5.5  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    25   5.5  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    25   7.2  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   9.6  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   9.6  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   9.6  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 28.3 bits (60), Expect = 0.78
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 337 ECQFLDLFVGSGMSILSHIALRMVTQSDLETCLTIHSKYISNDIK 381
           E QFL L  G G  ILSH+ LR   + +LE  ++  SK   ND K
Sbjct: 710 EQQFLALSKGFGELILSHL-LRPFDERELELLISGISKIDVNDWK 753


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 11/55 (20%), Positives = 32/55 (58%)

Query: 397 KSKMKSRKERLNRNKKSHKMSVEKNDRVDVMEDKLEDKNNFEEKLELKAAQVYSL 451
           K +++ + ++L + K++   S++KN +  +  D+ + KNN  +   +K   ++++
Sbjct: 37  KGEVEKQSKKLEKRKETLGESLDKNHKKKIERDEEKLKNNNRDLSLVKMKSMFAI 91


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 395 AKKSKMKSRKERLNRNKKSHKMSVEKNDRVDVMEDKLE 432
           A K ++K  KE++N   K  K    + D++    D+L+
Sbjct: 868 ALKQQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELK 905


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 304 CEESAPVWCPKCSGVVFCSIECRDTAVSSYHSFECQF 340
           C  S P+    C G+V C++  R     S+     QF
Sbjct: 252 CTNSFPLGTLLCVGIVICNLSVRKVLYQSHRKMCRQF 288


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 376 ISNDI---KTVEGSVLNDIEGVAKKSKMKSRKERLNRNKKSHKMSVEKNDRVDVMEDKLE 432
           I+ND+   K V  SV    EG   + K+K  +E   R K   + + E+  + D  ED  +
Sbjct: 329 ITNDLEEAKKVAASVKETQEG---EKKVKDAQEAEERKKAEGEAAAEEAAKDDEDEDDED 385

Query: 433 DKNN 436
           D +N
Sbjct: 386 DADN 389


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 415 KMSVEKNDRVDVMEDKLEDKNNFEEKLELK--AAQVY 449
           K  +++ND +D+M   L D  N EE L     AAQ +
Sbjct: 262 KNGIQRNDFMDLMIRMLRDTENPEEALTFNEVAAQAF 298


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 8/62 (12%)

Query: 82   RGKDARISSQRR-----GDAQSALKNEDLMKA---LALASQAVLRAPVTGENEAIDGGVS 133
            R + AR   +RR     G +  A+ N+D  +    LA     +    +  ENEA DGG++
Sbjct: 1148 RERQARFRERRRNRRLLGMSGQAINNDDDGRERADLAAGPSGMRNRAIDEENEATDGGLN 1207

Query: 134  LA 135
             A
Sbjct: 1208 AA 1209


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 593 QRALACRYWFHCECTACK 610
           Q  L C +WF+ +C + K
Sbjct: 427 QTVLKCNWWFYVDCKSSK 444


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 593 QRALACRYWFHCECTACK 610
           Q  L C +WF+ +C + K
Sbjct: 435 QTVLKCNWWFYVDCKSSK 452


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.133    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,031
Number of Sequences: 2123
Number of extensions: 29974
Number of successful extensions: 51
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 45
Number of HSP's gapped (non-prelim): 9
length of query: 743
length of database: 516,269
effective HSP length: 69
effective length of query: 674
effective length of database: 369,782
effective search space: 249233068
effective search space used: 249233068
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)