GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002075-TA|BGIBMGA002075-PA|undefined
         (159 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021208-1|AAH21208.1|  739|Homo sapiens leucine zipper-EF-hand ...    33   0.59 
BC014500-1|AAH14500.1|  739|Homo sapiens leucine zipper-EF-hand ...    33   0.59 
AF061025-1|AAD13138.1|  739|Homo sapiens leucine zipper-EF-hand ...    33   0.59 
AK000781-1|BAA91375.1|  393|Homo sapiens protein ( Homo sapiens ...    31   1.4  
AF307080-1|AAG27462.1| 1240|Homo sapiens lectomedin-3 protein.         31   1.4  
AC096723-1|AAY40992.1|  162|Homo sapiens unknown protein.              31   1.4  
AY650033-1|AAV66579.1|  979|Homo sapiens HECT and RCC1 containin...    29   9.6  

>BC021208-1|AAH21208.1|  739|Homo sapiens leucine zipper-EF-hand
           containing transmembrane protein 1 protein.
          Length = 739

 Score = 32.7 bits (71), Expect = 0.59
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 8/98 (8%)

Query: 37  STKGIKCYNCLSFDHPGCWDPDHPDYANITIPNIDCYIPGMEFLCIVI----TSESAKLV 92
           ST G++  NCL+    GC  P HP Y +    ++ C+    E L IV     TS S   V
Sbjct: 40  STLGLR--NCLNVPF-GCCTPIHPVYTSSRGDHLGCWALRPECLRIVSRAPWTSTSVGFV 96

Query: 93  ETGQEIGPVRA-RTCVPAKDFSKKTVSYSMCSKLSKEL 129
             G +  PVR   +  P +D S    S       +K+L
Sbjct: 97  AVGPQCLPVRGWHSSRPVRDDSVVEKSLKSLKDKNKKL 134


>BC014500-1|AAH14500.1|  739|Homo sapiens leucine zipper-EF-hand
           containing transmembrane protein 1 protein.
          Length = 739

 Score = 32.7 bits (71), Expect = 0.59
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 8/98 (8%)

Query: 37  STKGIKCYNCLSFDHPGCWDPDHPDYANITIPNIDCYIPGMEFLCIVI----TSESAKLV 92
           ST G++  NCL+    GC  P HP Y +    ++ C+    E L IV     TS S   V
Sbjct: 40  STLGLR--NCLNVPF-GCCTPIHPVYTSSRGDHLGCWALRPECLRIVSRAPWTSTSVGFV 96

Query: 93  ETGQEIGPVRA-RTCVPAKDFSKKTVSYSMCSKLSKEL 129
             G +  PVR   +  P +D S    S       +K+L
Sbjct: 97  AVGPQCLPVRGWHSSRPVRDDSVVEKSLKSLKDKNKKL 134


>AF061025-1|AAD13138.1|  739|Homo sapiens leucine zipper-EF-hand
           containing transmembrane protein 1 protein.
          Length = 739

 Score = 32.7 bits (71), Expect = 0.59
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 8/98 (8%)

Query: 37  STKGIKCYNCLSFDHPGCWDPDHPDYANITIPNIDCYIPGMEFLCIVI----TSESAKLV 92
           ST G++  NCL+    GC  P HP Y +    ++ C+    E L IV     TS S   V
Sbjct: 40  STLGLR--NCLNVPF-GCCTPIHPVYTSSRGDHLGCWALRPECLRIVSRAPWTSTSVGFV 96

Query: 93  ETGQEIGPVRA-RTCVPAKDFSKKTVSYSMCSKLSKEL 129
             G +  PVR   +  P +D S    S       +K+L
Sbjct: 97  AVGPQCLPVRGWHSSRPVRDDSVVEKSLKSLKDKNKKL 134


>AK000781-1|BAA91375.1|  393|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20774 fis, clone COL06031. ).
          Length = 393

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 38  TKGIKCYNCLSFDHPGCWDPDHPDYANITIP 68
           T G+  Y CL+ D  G WDP  PD +N + P
Sbjct: 211 TIGVSTYLCLAPD--GIWDPQGPDLSNCSSP 239


>AF307080-1|AAG27462.1| 1240|Homo sapiens lectomedin-3 protein.
          Length = 1240

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 38  TKGIKCYNCLSFDHPGCWDPDHPDYANITIP 68
           T G+  Y CL+ D  G WDP  PD +N + P
Sbjct: 525 TIGVSTYLCLAPD--GIWDPQGPDLSNCSSP 553


>AC096723-1|AAY40992.1|  162|Homo sapiens unknown protein.
          Length = 162

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 38  TKGIKCYNCLSFDHPGCWDPDHPDYANITIP 68
           T G+  Y CL+ D  G WDP  PD +N + P
Sbjct: 126 TIGVSTYLCLAPD--GIWDPQGPDLSNCSSP 154


>AY650033-1|AAV66579.1|  979|Homo sapiens HECT and RCC1 containing
           protein 4 isoform 3 protein.
          Length = 979

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 74  IPGMEFLCIVITSESAKLVETGQEIGPVRARTCVPAKDFSKKTVSYSMCSKLSKELSASE 133
           I GM+ L +VI S        G+E  PV + TC    D SK T   ++ SKL + +  +E
Sbjct: 921 ILGMKSLKLVIQSTGG-----GEEYLPV-SHTCFNLLDLSKYTEKETLRSKLIQAIDHNE 974

Query: 134 IFSRI 138
            FS I
Sbjct: 975 GFSLI 979


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.322    0.135    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,457,749
Number of Sequences: 224733
Number of extensions: 688266
Number of successful extensions: 1611
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1611
Number of HSP's gapped (non-prelim): 7
length of query: 159
length of database: 73,234,838
effective HSP length: 84
effective length of query: 75
effective length of database: 54,357,266
effective search space: 4076794950
effective search space used: 4076794950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)