GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002075-TA|BGIBMGA002075-PA|undefined
         (159 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118764-1|AAM50624.1|  425|Drosophila melanogaster GH09876p pro...    32   0.42 
AE014134-3010|AAF53735.2|  425|Drosophila melanogaster CG10650-P...    32   0.42 
AY071603-1|AAL49225.1|   80|Drosophila melanogaster RE65321p pro...    29   2.9  
AE014134-2176|AAF53178.1|  151|Drosophila melanogaster CG17218-P...    29   2.9  
AE014134-2178|AAF53179.2|  185|Drosophila melanogaster CG6579-PA...    28   5.2  
BT022976-1|AAY55392.1|  187|Drosophila melanogaster IP04187p pro...    28   6.8  
AE014134-1465|AAF52644.2|  187|Drosophila melanogaster CG14274-P...    28   6.8  

>AY118764-1|AAM50624.1|  425|Drosophila melanogaster GH09876p
           protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 42  KCYNCLSFDHPGCWDPDHPD-YANITIPNIDCY 73
           +C  C+S +  GCW   +PD    I  PN  CY
Sbjct: 321 QCITCISNEVSGCWSAKYPDTLPLINCPNGTCY 353


>AE014134-3010|AAF53735.2|  425|Drosophila melanogaster CG10650-PA
           protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 42  KCYNCLSFDHPGCWDPDHPD-YANITIPNIDCY 73
           +C  C+S +  GCW   +PD    I  PN  CY
Sbjct: 321 QCITCISNEVSGCWSAKYPDTLPLINCPNGTCY 353


>AY071603-1|AAL49225.1|   80|Drosophila melanogaster RE65321p
          protein.
          Length = 80

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)

Query: 39 KGIKCYNCLSFDHPGCWDPDHPDYANITIPNIDC-YIPGMEFL 80
          + IKC++C S + P C DP    + N T+   DC   P +E L
Sbjct: 22 QAIKCWDCRSDNDPKCGDP----FDNSTLAITDCQQAPELEHL 60


>AE014134-2176|AAF53178.1|  151|Drosophila melanogaster
          CG17218-PA, isoform A protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)

Query: 39 KGIKCYNCLSFDHPGCWDPDHPDYANITIPNIDC-YIPGMEFL 80
          + IKC++C S + P C DP    + N T+   DC   P +E L
Sbjct: 22 QAIKCWDCRSDNDPKCGDP----FDNSTLAITDCQQAPELEHL 60


>AE014134-2178|AAF53179.2|  185|Drosophila melanogaster CG6579-PA
           protein.
          Length = 185

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 37  STKGIKCYNCLSFDHPGCWDPDHPDYANITIPNIDC-YIPGMEFLCIVITSESAKLVETG 95
           S   IKCY C S   P C   D  D A+  I  +DC  +P    +  +        V T 
Sbjct: 60  SASAIKCYQCKSLTDPNC-AKDKIDSAS-NIRAVDCDSVPKPNTMEQLQPVTRCNKVVTS 117

Query: 96  QEIGPVRARTC 106
              G + +R C
Sbjct: 118 DRAGTIVSRDC 128


>BT022976-1|AAY55392.1|  187|Drosophila melanogaster IP04187p
           protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 41  IKCYNCLSFDHPGCWDPDHPDYANITIPNIDCYIPGMEFL-CIVITSESAKLVETGQEIG 99
           I+CY C S D+P C D      +N +I   +C +  M+ L   +         + G    
Sbjct: 20  IRCYVCDSSDNPSCADLG----SNSSIVAEECTLDKMKSLDTWLFDLNKFSYFDNGANKS 75

Query: 100 PVRARTCVPAKD-FSKKTVSYSMCSKLSKELSASEIF-SRIAVTRP 143
           P+     V AKD  ++K V+   C   + +  A EI  +++ +  P
Sbjct: 76  PLMNCQKVVAKDPDTRKVVTARFCQLDTGDSDACEILRTKLRIPSP 121


>AE014134-1465|AAF52644.2|  187|Drosophila melanogaster CG14274-PA
           protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 7/106 (6%)

Query: 41  IKCYNCLSFDHPGCWDPDHPDYANITIPNIDCYIPGMEFL-CIVITSESAKLVETGQEIG 99
           I+CY C S D+P C D      +N +I   +C +  M+ L   +         + G    
Sbjct: 20  IRCYVCDSSDNPSCADLG----SNSSIVAEECTLDKMKSLDTWLFDLNKFSYFDNGANKS 75

Query: 100 PVRARTCVPAKD-FSKKTVSYSMCSKLSKELSASEIF-SRIAVTRP 143
           P+     V AKD  ++K V+   C   + +  A EI  +++ +  P
Sbjct: 76  PLMNCQKVVAKDPDTRKVVTARFCQLDTGDSDACEILRTKLRIPSP 121


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.135    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,759,842
Number of Sequences: 52641
Number of extensions: 235370
Number of successful extensions: 548
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 540
Number of HSP's gapped (non-prelim): 13
length of query: 159
length of database: 24,830,863
effective HSP length: 79
effective length of query: 80
effective length of database: 20,672,224
effective search space: 1653777920
effective search space used: 1653777920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)