Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002074-TA|BGIBMGA002074-PA|IPR013769|HCO3- transporter,
cytoplasmic, IPR011531|HCO3-transporter, c-terminal, IPR003020|HCO3-
transporter, eukaryote, IPR001717|Anion exchange protein
(853 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0799 + 23282793-23282896,23283090-23283172,23283303-232834... 78 3e-14
01_01_0530 - 3877337-3877396,3877709-3877837,3877954-3878221,387... 76 1e-13
01_01_0531 - 3892738-3892757,3893083-3893111,3893330-3893355,389... 73 1e-12
05_01_0527 - 4541922-4541987,4543996-4544130,4544674-4544941,454... 60 7e-09
05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722 31 2.9
03_06_0285 + 32848085-32848988,32849057-32849245,32850136-328503... 31 2.9
12_01_0468 + 3661177-3661626 31 5.1
05_05_0029 + 21694448-21694567,21694666-21695117,21695214-216955... 31 5.1
05_03_0211 + 10236867-10237075,10238036-10238270,10238433-102386... 31 5.1
07_03_0572 - 19604643-19604745,19604947-19605629,19605786-196062... 30 6.8
06_02_0035 + 10816723-10819497,10819964-10820011 30 6.8
>12_02_0799 +
23282793-23282896,23283090-23283172,23283303-23283495,
23283618-23283756,23283844-23283894,23284274-23284439,
23284591-23284757,23284857-23285030,23285120-23285215,
23285288-23285425,23285525-23285844,23285924-23286188,
23286332-23286575,23288025-23288106,23288189-23288366
Length = 799
Score = 77.8 bits (183), Expect = 3e-14
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Query: 699 VEVKEQRLTGLLVAVMVGISVLASGWLCLVPMAVLFGVFLYMGISALGGIQFWDRCILLL 758
+EVKEQRL+ LL A MVG V A L +P +VL+G F +M I +L G QFW+R +LL
Sbjct: 477 IEVKEQRLSNLLQATMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLF 536
Query: 759 -KPVKHHPQL-----PYVRRVPTLKMHMYTLIQVGGVVVLYAVKSSRFS-LALPFFLVLM 811
P + + L +V VP + M+TL Q ++V + + + + P ++L+
Sbjct: 537 TAPSRRYKVLEEYHTTFVETVPFKTIAMFTLFQTMYLLVCFGITWIPIAGVLFPLMIMLL 596
Query: 812 VPLRMSLV-YIFTPLQLRALDGAQ 834
VP+R ++ +F L LD A+
Sbjct: 597 VPVRQYILPKLFKGAHLTDLDAAE 620
Score = 46.8 bits (106), Expect = 7e-05
Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Query: 550 RRALGDFGVPIAIVLMVGISCL----VPVKT-ETLVVPAGLNPTTVRSWFVPLNPGLETI 604
R + D+GVP+ +++ G+S + VP L P +P +W V + + +
Sbjct: 249 RGFIADYGVPLMVLVWTGVSYIPYGSVPKGIPRRLFSPNPWSPGAYDNWTVIRD--MPNV 306
Query: 605 XXXXXXXXXXXXXXVYIIVFMETHIAELIIAKPERRLKKGSGFHMDIVIMSFVNALCGMF 664
+ ++ + + +A + + E L+K FH D++++ F+ LCG+
Sbjct: 307 PLLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFLTLLCGLI 366
Query: 665 GAPWQCVATVRSVSHVSALTIM 686
G P +S H +L +
Sbjct: 367 GIPPANGVIPQSPMHTKSLATL 388
Score = 43.2 bits (97), Expect = 9e-04
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 20/158 (12%)
Query: 274 GVIRDMKRRYPFYVSDFVDALNG--QCVAATIFMYFAAVSSAITFGGLLAEKTYGKIGIS 331
G+ D+ R Y D+ + +A T +++FA+ I+FG L T G +
Sbjct: 10 GIKNDLHGRLQCYKQDWTGGFRAGIRILAPTTYIFFASAIPVISFGEQLERNTDGVLTAV 69
Query: 332 ETLSSGYVRSAVEGDLQVFTSAGGVLFALVAGQPMMITGATGPLLLLDESLANFCH---S 388
+TL+S T+ G++ + + GQP++I G P +L+ + NF
Sbjct: 70 QTLAS--------------TALCGIIHSFLGGQPLLILGVAEPTVLMYTFMFNFAKDRPD 115
Query: 389 YGFD-FLAARMYCGLWMIVIALCVASVEGSVAVKKITR 425
G FLA + +W ++ +A + + + TR
Sbjct: 116 LGRRLFLAWTGWVCVWTAILLFLLAILGACSIINRFTR 153
>01_01_0530 -
3877337-3877396,3877709-3877837,3877954-3878221,
3878385-3878776,3879003-3879119,3879209-3879304,
3879775-3879948,3880077-3880243,3880800-3880965,
3881040-3881178,3881767-3881901,3882157-3882161
Length = 615
Score = 76.2 bits (179), Expect = 1e-13
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 699 VEVKEQRLTGLLVAVMVGISVLASGWLCLVPMAVLFGVFLYMGISALGGIQFWDRCILLL 758
V V EQRL+ LL +++VG V A + ++P +VL+G F YM I +L G QFW+R L+
Sbjct: 397 VRVNEQRLSNLLQSLLVGACVGAMPVIKMIPTSVLWGYFAYMAIDSLPGNQFWERIRLIF 456
Query: 759 KP------VKHHPQLPYVRRVPTLKMHMYTLIQVGGVVVLYA---VKSSRFSLALPFFLV 809
P V P ++ VP+ + ++T+ Q+ +++ + + + LPFFL+
Sbjct: 457 IPSSRRYKVLEGPHASFMESVPSKTITVFTIFQLVYLLICFGITWIPIAGILFPLPFFLM 516
Query: 810 LMVPLRMSLVYIFTPLQLRALDGAQ 834
+++ + L F P LR LD A+
Sbjct: 517 ILIRQHV-LPKFFEPNDLRELDAAE 540
Score = 49.2 bits (112), Expect = 1e-05
Identities = 30/142 (21%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 550 RRALGDFGVPIAIVLMVGISCLVPVKTET-----LVVPAGLNPTTVRSWFVPLNPGLETI 604
R + D+GVP+ +++ +S +P + L P +++ W + + L ++
Sbjct: 152 RGFISDYGVPLMVIVWTALSYALPKDVPSGVPRRLFSPLPWESSSLHHWTIAKD--LFSV 209
Query: 605 XXXXXXXXXXXXXXVYIIVFMETHIAELIIAKPERRLKKGSGFHMDIVIMSFVNALCGMF 664
+ + F + +A + + E LKK S +H DI+++ F+ LCG+
Sbjct: 210 PPAYIFAAILPALMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILVLGFMVLLCGLI 269
Query: 665 GAPWQCVATVRSVSHVSALTIM 686
G P +S H +L ++
Sbjct: 270 GIPPSNGVLPQSPMHTRSLAVL 291
>01_01_0531 -
3892738-3892757,3893083-3893111,3893330-3893355,
3893639-3893767,3893884-3894151,3894355-3894694,
3894925-3895045,3895135-3895230,3895604-3895777,
3895902-3896068,3896675-3896840,3896915-3897053,
3897135-3897327,3897442-3897524,3897850-3897881
Length = 660
Score = 72.9 bits (171), Expect = 1e-12
Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 699 VEVKEQRLTGLLVAVMVGISVLASGWLCLVPMAVLFGVFLYMGISALGGIQFWDRCILLL 758
V V EQRL+ LL +++VG V A + ++P +VL+G F YM I +L G QFW+R
Sbjct: 450 VRVNEQRLSNLLQSLLVGACVGAMPVIKMIPTSVLWGYFAYMAIDSLPGNQFWER----- 504
Query: 759 KPVKHHPQLPYVRRVPTLKMHMYTLIQVGGVVVLYA---VKSSRFSLALPFFLVLMVPLR 815
V P ++ VP+ + ++T+ Q+ +++ + + + LPFFL++++
Sbjct: 505 --VLEGPHASFMESVPSKTITVFTIFQLVYLLICFGITWIPIAGILFPLPFFLMILIRQH 562
Query: 816 MSLVYIFTPLQLRALDGAQ 834
+ L F P LR LD A+
Sbjct: 563 V-LPKFFEPNDLRELDAAE 580
Score = 49.6 bits (113), Expect = 1e-05
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 550 RRALGDFGVPIAIVLMVGISCLVPVKTET-----LVVPAGLNPTTVRSWFVPLNPGLETI 604
R + D+GVP+ +++ S +P + L P ++++ W V + L ++
Sbjct: 208 RGFIADYGVPLMVIVWTAFSYTLPKDVPSGVPRRLFSPLPWESSSLQHWTVAKD--LFSV 265
Query: 605 XXXXXXXXXXXXXXVYIIVFMETHIAELIIAKPERRLKKGSGFHMDIVIMSFVNALCGMF 664
V + F + +A + + E LKK S +H DI+++ F+ LCG+
Sbjct: 266 PPAYIFAAILPALMVAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILVLGFMVLLCGLI 325
Query: 665 GAPWQCVATVRSVSHVSALTIM 686
G P +S H +L ++
Sbjct: 326 GIPPSNGVLPQSPMHTRSLAVL 347
Score = 46.4 bits (105), Expect = 1e-04
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 22/133 (16%)
Query: 299 VAATIFMYFAAVSSAITFGGLLAEKTYGKIGISETLSSGYVRSAVEGDLQVFTSAGGVLF 358
+A T++++FA+ I FG L+ +T G + ETL+S T+ G++
Sbjct: 13 LAPTMYIFFASALPVIAFGAQLSRETNGILTTVETLAS--------------TALCGIIH 58
Query: 359 ALVAGQPMMITGATGPLLLLDESLANFCHSYGFDFLAARMYCG------LWMIVIALCVA 412
+++ GQP++I G P +++ L NF + L R+Y +W ++ +A
Sbjct: 59 SILGGQPLLIVGVAEPTIIMYTYLYNFAKNQ--QALGERLYLAWAGWVCIWTALMLFLLA 116
Query: 413 SVEGSVAVKKITR 425
S + + TR
Sbjct: 117 MFNASNVISRFTR 129
>05_01_0527 -
4541922-4541987,4543996-4544130,4544674-4544941,
4545429-4545751,4546096-4546212,4546309-4546422,
4546613-4546786,4546848-4546999,4547133-4547298,
4547387-4547525,4547622-4547814,4548084-4548166,
4548250-4548365,4548878-4548947,4549151-4549272
Length = 745
Score = 60.1 bits (139), Expect = 7e-09
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 20/161 (12%)
Query: 272 FGGVIRDMKRRYPFYVSDFVDALNG--QCVAATIFMYFAAVSSAITFGGLLAEKTYGKIG 329
F GV+ D K R Y D++D + +A T++++FA+ + FG L+ T G +
Sbjct: 76 FEGVVNDFKGRLSCYKQDWIDGFRTGFRILAPTLYIFFASALPVVAFGEQLSNDTDGALT 135
Query: 330 ISETLSSGYVRSAVEGDLQVFTSAGGVLFALVAGQPMMITGATGPLLLLDESLANFCHSY 389
ETL+S T+ G++ +++ GQP++I G P +++ + NF ++
Sbjct: 136 TVETLAS--------------TAICGIIHSILGGQPLLIVGVAEPTIIMYTYIYNFAKNH 181
Query: 390 ---GFD-FLAARMYCGLWMIVIALCVASVEGSVAVKKITRF 426
G FL + +W + +A +V + + TRF
Sbjct: 182 PNLGERLFLPWAGWVCIWTAFMLFLMAMFNAAVVINRFTRF 222
Score = 57.6 bits (133), Expect = 4e-08
Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 699 VEVKEQRLTGLLVAVMVGISVLASGWLCLVPMAVLFGVFLYMGISALGGIQFWDRC-ILL 757
V V EQR++ LL ++++ V + +P +VL+G F YM I ++ G QFW+R +L
Sbjct: 523 VRVNEQRVSNLLQSLLIAGCVGVMPIIQKIPTSVLWGYFAYMSIDSVPGNQFWERTQLLF 582
Query: 758 LKPVKHHPQL-----PYVRRVPTLKMHMYTLIQVGGVVVLYAVKSSRFS-LALPFFLVLM 811
+ P + + L ++ VP K+ +T+ Q+ +++++ + + + P +
Sbjct: 583 ISPQRRYKLLEGAHASFMESVPIKKISAFTIFQLVYLLIVWGMTWIPVAGILFPLLFFFL 642
Query: 812 VPLRMSLV-YIFTPLQLRALDGAQ 834
+ +R ++ F P L LD A+
Sbjct: 643 IVIRQYILPKFFDPRHLWELDAAE 666
Score = 35.5 bits (78), Expect = 0.18
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 622 IVFMETHIAELIIAKPERRLKKGSGFHMDIVIMSFVNA------LCGMFGAPWQCVATVR 675
+ F + +A + + E LK S +H DI+++SF++ +CG+ G P +
Sbjct: 370 LYFFDHSVASQLAQQKEFNLKNPSAYHYDILVLSFMDTNAMQVLICGLIGIPPSNGVLPQ 429
Query: 676 SVSHVSALTIM 686
S H +L ++
Sbjct: 430 SPMHTRSLAVL 440
>05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722
Length = 740
Score = 31.5 bits (68), Expect = 2.9
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 215 RAKSEMIRRRKINALERKRIVADGDKPSDEKKALLAAEAGGMPPEEPDDPLSRTGRLFGG 274
RA E++ + L R VAD SD++ L +AE+G + +D LS G FGG
Sbjct: 85 RAAGEVLAILESQGLARFSDVADSGSGSDDEDGLESAESGSKARGDAEDALS--GSEFGG 142
>03_06_0285 +
32848085-32848988,32849057-32849245,32850136-32850311,
32850569-32851141
Length = 613
Score = 31.5 bits (68), Expect = 2.9
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 202 DWERQALLPLEELRAKSEMIRRRKINALERKRIVADGDKPSDEKKALLAAEAGGMPPEEP 261
D + +A PLE+LR + E + + K + + G K + A+ G MPP +
Sbjct: 443 DHKLEAEFPLEDLRERLEELEKAKTEKKKAASSSSSGGSSGPANKRIRASTGGPMPPAKA 502
Query: 262 DDPLSRTG 269
TG
Sbjct: 503 GRLTDYTG 510
>12_01_0468 + 3661177-3661626
Length = 149
Score = 30.7 bits (66), Expect = 5.1
Identities = 24/125 (19%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Query: 155 YHEVGRSISTLMSNPAFHSIAYKADDRRELLSAINEFLDDSIVLPPGDWERQALLPLEEL 214
YH RS + S+P F SI+++ + + LL A + + + D + + EE
Sbjct: 8 YHHRHRSCAAAPSHPLFPSISFRGNTTKSLLDAQDIVMSEKFACLSLDEQLHSDEEEEEE 67
Query: 215 RAKSEMIRRRKINALERKRIVADGDKPSDEKKALLAAEAGGMPPEEPDDPLSRTGRLFGG 274
+ E + + +E + +V + ++ +E++ E +E + ++ + G
Sbjct: 68 EEEEEEVEEEE--DIEEEEVVEEEEEEIEEEEVKEEEEELREQVQEAGEEVNEEQQGADG 125
Query: 275 VIRDM 279
V++ M
Sbjct: 126 VVQSM 130
>05_05_0029 +
21694448-21694567,21694666-21695117,21695214-21695529,
21695863-21697122
Length = 715
Score = 30.7 bits (66), Expect = 5.1
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 215 RAKSEMIRRRKINALERKRIVADGDKPSDEKKALLAAEAGGMPPEEPDDPLS 266
RA E++ + L R AD SD++ L +AE+GG E +D LS
Sbjct: 60 RAAGEVLAILESQGLARFSDAADSGSGSDDEDGLESAESGGKARGEAEDALS 111
>05_03_0211 +
10236867-10237075,10238036-10238270,10238433-10238602,
10240324-10240466,10240590-10240767,10241441-10242008,
10243001-10243113,10244521-10244764,10245201-10245278,
10246500-10246727
Length = 721
Score = 30.7 bits (66), Expect = 5.1
Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 235 VADGDKPSDEKKALLAAEAGGMPPEEPDDPLSRTGRLFGGVIRDMKRRYPFYVSDFVDAL 294
V DGD P + A G+ P + + +SR R+ G +++ + SD +
Sbjct: 36 VGDGDDPDSSSSSGKQASVSGLSP-KANAVVSRCARVLGTSTDELRYDFDMQASDSIKQQ 94
Query: 295 NGQCVAATIFMYFAAVSSAITFGGLLAEKTYGKIGISETLS 335
+ A++ A G L++K++ ++ L+
Sbjct: 95 INYARNFLEYCCLRALAQASQIAGYLSDKSFRRLNFDMMLA 135
>07_03_0572 -
19604643-19604745,19604947-19605629,19605786-19606284,
19606370-19606878,19607110-19607148,19607347-19607411,
19609081-19609201,19610229-19610315,19611096-19611179,
19611925-19612175,19612869-19612962,19613043-19613284,
19614187-19614505
Length = 1031
Score = 30.3 bits (65), Expect = 6.8
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 26 LRSRCSGCSARAACRRHSVALLNLSERRRRSTHAR-PSAAGL 66
LRSR + +A AAC ++A+ L RRRR AR P++ GL
Sbjct: 6 LRSRAAAAAAAAACLA-ALAVAALLHRRRRRGRARAPASPGL 46
>06_02_0035 + 10816723-10819497,10819964-10820011
Length = 940
Score = 30.3 bits (65), Expect = 6.8
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 778 MHMYTLIQVGGVVVLYAVKSSRFSLALPFFLVLMVPLRMSLVYIFTPLQLRALDGAQ 834
MHM ++ + G++V YA SSR ++V M + ++ V I+ L LR G++
Sbjct: 864 MHMVVVLDLLGLLVAYAAGSSR-DWGTSGYVVAMAVMVLAYVAIYVFLSLRDRKGSE 919
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.324 0.138 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,188,656
Number of Sequences: 37544
Number of extensions: 1002860
Number of successful extensions: 3941
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3920
Number of HSP's gapped (non-prelim): 18
length of query: 853
length of database: 14,793,348
effective HSP length: 88
effective length of query: 765
effective length of database: 11,489,476
effective search space: 8789449140
effective search space used: 8789449140
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 64 (29.9 bits)
- SilkBase 1999-2023 -