Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002074-TA|BGIBMGA002074-PA|IPR013769|HCO3- transporter,
cytoplasmic, IPR011531|HCO3-transporter, c-terminal, IPR003020|HCO3-
transporter, eukaryote, IPR001717|Anion exchange protein
(853 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 281 2e-75
SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.) 271 2e-72
SB_45992| Best HMM Match : HCO3_cotransp (HMM E-Value=0) 248 1e-65
SB_2823| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 7e-27
SB_11366| Best HMM Match : N_methyl (HMM E-Value=3.3) 54 5e-07
SB_40264| Best HMM Match : DUF667 (HMM E-Value=0) 33 1.3
SB_39508| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 6.8
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 281 bits (688), Expect = 2e-75
Identities = 151/353 (42%), Positives = 219/353 (62%), Gaps = 38/353 (10%)
Query: 78 SESQDELRRTHNDSILKRIPDDAEATTVLVGAVGFLDQPTIAFVRLAEGIYMPSITEVPV 137
++ QD L+ +D + R+P+DAEAT VLVG + L P AFVRLA+G Y+ ++TEV +
Sbjct: 1099 TQPQDPLKNQESD-VKARVPEDAEATNVLVGTLDCLKNPVTAFVRLAKGCYLGNVTEVAI 1157
Query: 138 PVRFMFILLGPGGADLDYHEVGRSISTLMSNPAFHSIAYKADDRRELLSAINEFLDDSIV 197
PVRF+F++LGP YHE+GRSI+TLMS+ FH +AY ++ R ++L AINEFLDD++V
Sbjct: 1158 PVRFLFVMLGPETQSDTYHEIGRSIATLMSDQVFHDLAYYSESREDILMAINEFLDDTVV 1217
Query: 198 LPPGDWERQALLPLEELRAKSEMIRRRKINALERKRIVADGDKPSDEKKALLAAEAGGMP 257
LPPG+W++Q L+P+ ++K+ M +RRK + K I A +A +A
Sbjct: 1218 LPPGEWDKQLLIPVLLSQSKT-MAKRRK----QAKEINA------------IATQAA--- 1257
Query: 258 PEEPDDPLSRTGRLFGGVIRDMKRRYPFYVSDFVDALNGQCVAATIFMYFAAVSSAITFG 317
EE D+PL RTGR GG+I+D+K R Y+SDF D N QC+ T+F+YFA + + FG
Sbjct: 1258 -EEEDNPLKRTGRFCGGLIQDIKHRSKTYISDFKDGFNWQCLLVTVFLYFAVFAPNVAFG 1316
Query: 318 GLLAEKTYGKIGISETLSSGYVRSAVEGDLQVFTSA-GGVLFALVAGQPMMITGATGPLL 376
GLLAEKT +G+SE +F S G+LFAL +GQP++I GATGP++
Sbjct: 1317 GLLAEKTDQWLGVSEV---------------IFASCFCGLLFALFSGQPLIIIGATGPVM 1361
Query: 377 LLDESLANFCHSYGFDFLAARMYCGLWMIVIALCVASVEGSVAVKKITRFTED 429
+ ++++ FC +FL R + G W++VI V + EG V K + D
Sbjct: 1362 VFEQTIFKFCEQSNIEFLPWRCWIGFWVLVILFLVVAFEGCFLVFKKNPLSRD 1414
Score = 262 bits (643), Expect = 6e-70
Identities = 144/372 (38%), Positives = 221/372 (59%), Gaps = 35/372 (9%)
Query: 500 QPNTALFCTMLTLATFVLAYYLRIFRNGKFLGRSSATSRVQVTGRDGIQARRALGDFGVP 559
+PNTAL C +L T+ +A+Y+R FRN F G+ +ARR + DFG+
Sbjct: 1436 EPNTALLCAILMFGTYFVAFYMRKFRNSHFFGK---------------KARRLVSDFGIA 1480
Query: 560 IAIVLMVGISCLV--PVKTETL----VVPAGLNPT--TVRSWFVPLNPGLETIXXXXXXX 611
IA++ MV I + V T + V G +PT T R WF+ ++++
Sbjct: 1481 IAMITMVIIDVAIRDTVITPKISIGDVTKVGFHPTLKTKRGWFINPMGLVDSMKAGWVFA 1540
Query: 612 XXXXXXXVYIIVFMETHIAELIIAKPERRLKKGSGFHMDIVIMSFVNALCGMFGAPWQCV 671
V I++FMET + ++I K E L+K G++MD+++M + +C +FG PW C
Sbjct: 1541 AIIPALFVGILLFMETELTGVLINKKENCLQKRPGYNMDLLLMGVITLICSLFGLPWMCP 1600
Query: 672 ATVRSVSHVSALTIMSTTHAPGDKPHIVEVKEQRLTGLLVAVMVGISVLASGWLCLVPMA 731
ATVRSVSH +AL++ ST+HAPG+KP++VEV+EQR+T +L+ V+ G+S+L + L VP+
Sbjct: 1601 ATVRSVSHFNALSVWSTSHAPGEKPYLVEVREQRITNILIHVLTGMSILLAPVLHHVPVP 1660
Query: 732 VLFGVFLYMGISALGGIQFWDRCILLLKPVKHHPQLPYVRR-----------VPTLKMHM 780
VLFGV LY+G+S+L +Q +R I++L P KHHP + YVR+ VPT K+H
Sbjct: 1661 VLFGVLLYLGLSSLSNLQLINRLIMMLMPPKHHPDVRYVRKVTTTRGGFRVGVPTAKIHG 1720
Query: 781 YTLIQVGGVVVLYAVKSSRFSLALPFFLVLMVPLRMSLVYIFTPLQLRALDGAQKDIDKD 840
YTLIQ+ ++VL AVK + + + PFF++ ++P+R L +F+ L LD + D D D
Sbjct: 1721 YTLIQLACLLVLMAVKLTILAPSFPFFIICLIPVRRLLGKVFSQHDLEELDNEEDDYD-D 1779
Query: 841 DEPDFYEEAPIP 852
+ D Y+ +P
Sbjct: 1780 SDIDEYDTLIMP 1791
>SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 271 bits (664), Expect = 2e-72
Identities = 199/612 (32%), Positives = 291/612 (47%), Gaps = 77/612 (12%)
Query: 56 STHARPSAAGLDPREVEYLAHAS-ESQDELRRTHNDSILKRIPDDAEATTVLVGAVGFLD 114
S A PSA L + E A E + +T++ + +K++P AEA+ +VG + FL
Sbjct: 963 SFRALPSAVDLVSQGREGDGKAEDEDTNNKEQTYDYTFMKKLPTGAEASIAMVGELEFLK 1022
Query: 115 QPTIAFVRLAEGIYMPSITEVPVPVRFMFILLGPGGADLDYHEVGRSISTLMSNPAFHSI 174
+P AFVRL G +TEVP+P RF+FI++GP YHEVGR+++TLMS+ FH +
Sbjct: 1023 KPINAFVRLETGQVFGDMTEVPIPTRFIFIMMGPPSTPGRYHEVGRAMATLMSDEIFHEV 1082
Query: 175 AYKADDRRELLSAINEFLDDSIVLPPGDWERQALLPLEELRAKSEMIRRRKINALERKRI 234
AYKA R ++L+AI+EFL VLPPG+W+ + E R N ERK
Sbjct: 1083 AYKAQCREDILAAIDEFLMQVTVLPPGEWDPNIRIEPPSTVPNQEKRLDRTANGGERKH- 1141
Query: 235 VADGDKPSDEKKALLAAEAGGMPPEEPDDPLSRTGRLFGGVIRDMKR-RYPFYVSDFVDA 293
D +E P + ++ L RTGR FGG+I DMKR R + D D
Sbjct: 1142 ----DDLGEEHD----------PAGDREEALRRTGRWFGGLIADMKRYRKRLWPGDLRDV 1187
Query: 294 LNGQCVAATIFMYFAAVSSAITFGGLLAEKTYGKIGISETLSSGYVRSAVEGDLQVFTSA 353
L+ Q +A+ IF+Y A ++ ITFGGL++ KT +G E + G +
Sbjct: 1188 LSLQSIASVIFIYIACLTPIITFGGLMSTKTGHMMGAMEQMLGGAI-------------- 1233
Query: 354 GGVLFALVAGQPMMITGATGPLLLLDESLANFCHSYGFDFLAARMYCGLWMIVIALCVAS 413
GG+LFAL +GQP++I GATGP+L+ +E + FC G ++L+ R++ G+W ++ L +
Sbjct: 1234 GGILFALFSGQPLIILGATGPMLVFEEIVYTFCERVGLEYLSFRLWIGIWTMLFCLILVV 1293
Query: 414 VEGSVAVKKITRFTEDXXXXXXXXXXXXEPITSTIAVYRANPLGIDYCQFREVALSNSTV 473
+ S + TRFTE+ E + P+ I Y + E
Sbjct: 1294 TDASAMICYFTRFTEETFATLIAIIYIYEGFKKLFHILDDYPIHIGYIEHHECFCIKP-- 1351
Query: 474 QPLLNSTSVGNSSVV-----------APAPPVSRLPPQ-------PNTALFCTMLTLATF 515
+ ++ + S N S V P P R + N L ML TF
Sbjct: 1352 ETVMTNVSFPNGSFVLKEVENLTKLWVPIPDCVRAGGELRGDGCSENVFLLSVMLCFGTF 1411
Query: 516 VLAYYLRIFRNGKFLGRSSATSRVQVTGRDGIQARRALGDFGVPIAIVLMVGISCLVPVK 575
VLA L+ F + + S+V R + DF V I+I++ VG+ + V
Sbjct: 1412 VLAITLKNFHSSSYF-----PSKV----------RAKISDFAVLISIMVAVGLDYAIGVD 1456
Query: 576 TETLVVPAGLNPTTV--RSWFVP---LNPGLETIXXXXXXXXXXXXXXVYIIVFMETHIA 630
T L++P PT RSW VP NPG TI I+VFM+ I
Sbjct: 1457 TPKLMIPLSFQPTAAHKRSWIVPPLGNNPGW-TIPAAAIPAILAT-----ILVFMDQQIT 1510
Query: 631 ELIIAKPERRLK 642
LI+ + E +LK
Sbjct: 1511 ALIVNRREHKLK 1522
>SB_45992| Best HMM Match : HCO3_cotransp (HMM E-Value=0)
Length = 890
Score = 248 bits (608), Expect = 1e-65
Identities = 147/367 (40%), Positives = 212/367 (57%), Gaps = 53/367 (14%)
Query: 91 SILKRIPDDAEATTVLVGAVGFLDQPTIAFVRLAEGIYMPSITEVPVPVRFMFILLGPGG 150
SI RIP DAEATTVLVG L P AFVRLA G + ++ EV +PVRF+FILLGP
Sbjct: 201 SIDARIPKDAEATTVLVGGHKHLSAPEGAFVRLARGCRLRNLAEVNIPVRFLFILLGPDD 260
Query: 151 ADLDYHEVGRSISTLMSNPAFHSIAY-----KADDR--------------------RELL 185
+DYHEVGR ++TLMS+ F AY K D R ++L
Sbjct: 261 KSIDYHEVGRCVATLMSDRLFLDCAYDAEVGKPDSRVMTLRLFKQVKVRFDLFQELQDLY 320
Query: 186 SAINEFLDDSIVLPPGDWERQAL---LPLEELRAKSEMIRRRKINALERKRIVADGDKPS 242
A++ FL D++++PPG+W+R L LP K +RRR L ++R +D +
Sbjct: 321 DAMDSFLSDTVIIPPGEWDRNVLAQSLPSLAKETKKTALRRRGA-LLRKQRHFSDLETQE 379
Query: 243 DEKKALLAAEAGGMPPEEPDDPLSRTGRLFGGVIRDMKRRYPFYVSDFVDALNGQCVAAT 302
++L E DDPL RTG GG++RD+KRR+P+Y SD D+ N +CV AT
Sbjct: 380 TVTESL----------ELEDDPLKRTGLFCGGLLRDVKRRFPYYKSDMTDSFNWRCVMAT 429
Query: 303 IFMYFAAVSSAITFGGLLAEKTYGKIGISETLSSGYVRSAVEGDLQVFTSAGGVLFALVA 362
I +Y A ++ AI+FGGLL +KT G +G++E + V T+ GV+FAL A
Sbjct: 430 ILVYVACLAPAISFGGLLYKKTKGWMGVAEMI--------------VSTALSGVIFALFA 475
Query: 363 GQPMMITGATGPLLLLDESLANFCHSYGFDFLAARMYCGLWMIVIALCVASVEGSVAVKK 422
GQP++I GATGPLL+ + ++ N S+ F+++ R + G+W+++I + ++EG ++
Sbjct: 476 GQPLIIIGATGPLLVFETNVFNLSESFDFEYMPWRAWVGIWVMLICWALVAMEGCFLIRY 535
Query: 423 ITRFTED 429
TRFTE+
Sbjct: 536 FTRFTEE 542
Score = 166 bits (403), Expect = 8e-41
Identities = 91/249 (36%), Positives = 144/249 (57%), Gaps = 22/249 (8%)
Query: 502 NTALFCTMLTLATFVLAYYLRIFRNGKFLGRSSATSRVQVTGRDGIQARRALGDFGVPIA 561
NTALF T+L TF +A+ +R R+ +FL + RR + DFGV IA
Sbjct: 584 NTALFTTILFFGTFFVAHIIRDVRHSRFLNHT---------------LRRVISDFGVLIA 628
Query: 562 IVLMVGISCLVP-VKTETLVVPAGLNPTT--VRSWFVPLNP-GLET-IXXXXXXXXXXXX 616
IV M+ + + + L VP G + T+ +R W+V NP G E +
Sbjct: 629 IVAMILVELSAQSIYVQRLNVPDGFDVTSPHLRGWYV--NPMGTERRLGADAIFGALVPA 686
Query: 617 XXVYIIVFMETHIAELIIAKPERRLKKGSGFHMDIVIMSFVNALCGMFGAPWQCVATVRS 676
V I+VFME +I+ K + +LKKG G+++D+ ++ F+ +C + G PW C V +
Sbjct: 687 ILVSILVFMEVEFCNVILDKKDNQLKKGPGYNLDLFVVGFLMGMCSVLGLPWMCATPVHT 746
Query: 677 VSHVSALTIMSTTHAPGDKPHIVEVKEQRLTGLLVAVMVGISVLASGWLCLVPMAVLFGV 736
VSH+ AL + ST HAPG+ P ++EVKEQR+T +++ V++G+++L + + L P+ VLFGV
Sbjct: 747 VSHLHALMVHSTNHAPGEHPQLLEVKEQRVTNIIIHVLIGLTMLLAPVIRLTPVVVLFGV 806
Query: 737 FLYMGISAL 745
F+++G S+L
Sbjct: 807 FVHLGFSSL 815
>SB_2823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 567
Score = 120 bits (288), Expect = 7e-27
Identities = 67/204 (32%), Positives = 114/204 (55%), Gaps = 5/204 (2%)
Query: 621 IIVFMETHIAELIIAKPERRLKKGSGFHMDIVIMSFVNALCGMFGAPWQCVATVRSVSHV 680
++ FM+ +I+ ++ P RLKKGS FH+D+++++ +N + FG PW A S HV
Sbjct: 348 LLFFMDQNISSAMVNNPGNRLKKGSAFHLDLLVVAIINGILSAFGLPWIHGALPHSPLHV 407
Query: 681 SALTIMSTTHAPGDK-PHIVEVKEQRLTGLLVAVMVGISVLASGW-LCLVPMAVLFGVFL 738
AL + G IV+V+E RLT L+ +++G+S+L L +P AVL G+FL
Sbjct: 408 RALADVEERVDQGHVFDIIVKVRETRLTTLIAHILIGLSLLMLPTPLDYIPTAVLDGLFL 467
Query: 739 YMGISALGGIQFWDRCILLLKPVKHHPQLPYVRRVPTLKMHMYT---LIQVGGVVVLYAV 795
++ +++L Q ++R +L + +P Y+RRVP KMH YT ++Q+G +
Sbjct: 468 FVAVTSLDDNQMFERLLLFVTEQSAYPPNHYIRRVPQRKMHAYTGMQMLQLGILCGFGFS 527
Query: 796 KSSRFSLALPFFLVLMVPLRMSLV 819
+ P L+L++P+R +V
Sbjct: 528 PMPYLKMVFPVLLLLLLPIRHLVV 551
>SB_11366| Best HMM Match : N_methyl (HMM E-Value=3.3)
Length = 169
Score = 54.0 bits (124), Expect = 5e-07
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 769 YVRRVPTLKMHMYTLIQVGGVVVLYAVKSSRFSLALPFFLVLMVPLRMSLVYIFTPLQLR 828
YVR V T KM+ +TL+QV ++ L A+K + + PFF++ +VPLR L +T +L
Sbjct: 86 YVRSVSTGKMNAFTLVQVVCLLFLVAIKVTVVAPFFPFFVICLVPLRRMLERFYTDQELE 145
Query: 829 ALDGAQKD-IDKD-DEPD 844
LD +++ +D D DE D
Sbjct: 146 DLDNEEEEYLDSDLDEFD 163
>SB_40264| Best HMM Match : DUF667 (HMM E-Value=0)
Length = 2074
Score = 32.7 bits (71), Expect = 1.3
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 41 RHSVALLNLSERRRRSTHARPSAAGLDPREVEYLAHASESQDELRRTH 88
+H ++N+++ R+ HAR AAGL P ++ ++ E R+TH
Sbjct: 211 QHYTQVINITKLRQADLHAR-EAAGLPPPSTPTISEMDSTKQEERQTH 257
>SB_39508| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1814
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 405 IVIALCVASVEGSVAVKKITRFTEDXXXXXXXXXXXXEPITSTIAVYRANPLGIDYC-QF 463
+V+++ V G A ++++ T + R +P +D C ++
Sbjct: 704 VVMSVEVYGCRGGCAARRLSWVTPGFSQSRRCKTTASAKLACLQVDSRGSPRNVDICKEY 763
Query: 464 REVALSNSTVQPLLNSTSVGNSS 486
R+ L+++ PLL+ S NS+
Sbjct: 764 RKPILNSTGASPLLSGPSAANSA 786
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.324 0.138 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,219,606
Number of Sequences: 59808
Number of extensions: 1025256
Number of successful extensions: 3568
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3537
Number of HSP's gapped (non-prelim): 21
length of query: 853
length of database: 16,821,457
effective HSP length: 88
effective length of query: 765
effective length of database: 11,558,353
effective search space: 8842140045
effective search space used: 8842140045
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 64 (29.9 bits)
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