Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002073-TA|BGIBMGA002073-PA|IPR003020|HCO3- transporter,
eukaryote, IPR013769|HCO3- transporter, cytoplasmic
(378 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 121 8e-28
SB_45992| Best HMM Match : HCO3_cotransp (HMM E-Value=0) 109 4e-24
SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.51
SB_46399| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.67
SB_21302| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-27) 32 0.88
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 31 1.2
SB_54041| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-11) 31 1.2
SB_39193| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.029) 31 1.2
SB_2213| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8e-26) 31 1.2
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 31 1.5
SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_19469| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00048) 29 6.2
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.2
SB_7968| Best HMM Match : RVT_1 (HMM E-Value=0.25) 29 8.2
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 121 bits (292), Expect = 8e-28
Identities = 57/114 (50%), Positives = 82/114 (71%), Gaps = 2/114 (1%)
Query: 222 QVFVQLDELLATEDGEAEWKETARWIKYEEDVEEGSARWGRPHVASLSFHSLLNLRRCLE 281
+ F++L EL +D + WKETARWIK+EEDVE+ S RW +PHVASLSFHSLL LR+ LE
Sbjct: 894 EAFIELQELTG-KDQDMRWKETARWIKFEEDVED-SNRWSKPHVASLSFHSLLELRKGLE 951
Query: 282 TGVVLLDLDEKDLPGVAYRVVESMVTEGLIEEDDKPVVMRSLLLRHRHVHDDRG 335
G VLLDL++ DL +A +V++MV + ++D V+ +LL++H+H + + G
Sbjct: 952 RGTVLLDLEQFDLQSIAEAIVDNMVITDQLCKEDSDRVLSALLVKHKHQYQEAG 1005
>SB_45992| Best HMM Match : HCO3_cotransp (HMM E-Value=0)
Length = 890
Score = 109 bits (262), Expect = 4e-24
Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 224 FVQLDELLATEDGEAEWKETARWIKYEEDVEEGSARWGRPHVASLSFHSLLNLRRCLETG 283
FV+L+EL ++D + WKETARWIK+EEDVEE + RWG+PH+ L FHS +R + G
Sbjct: 16 FVELEELSCSDD-KLIWKETARWIKFEEDVEENANRWGKPHIPCLGFHSCQEVRTVFQNG 74
Query: 284 VVLLDLDEKDLPGVAYRVVESMVTEGLIEEDDKPVVMRSLLLRHRH 329
+LLDLDE LP +A V ++++G + E + + LL H H
Sbjct: 75 CLLLDLDEDQLPSIAEAVASKLISDGKLSEKEHDAFLSILLTPHEH 120
>SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 100 bits (240), Expect = 2e-21
Identities = 43/108 (39%), Positives = 68/108 (62%)
Query: 222 QVFVQLDELLATEDGEAEWKETARWIKYEEDVEEGSARWGRPHVASLSFHSLLNLRRCLE 281
Q+F +L+E EDG WKETARW+K+EEDVEE RW +PHVA+LS +S+ LR C+
Sbjct: 792 QIFGELEEYQCEEDGSGVWKETARWVKFEEDVEEVGDRWSKPHVATLSLYSVFELRSCIL 851
Query: 282 TGVVLLDLDEKDLPGVAYRVVESMVTEGLIEEDDKPVVMRSLLLRHRH 329
G +LL ++ + + +++ +V G +E+D + + L +H+H
Sbjct: 852 HGTMLLHMNAINTSQIFDLILDDLVNSGQLEQDLRAQMKEVFLQKHKH 899
>SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 32.7 bits (71), Expect = 0.51
Identities = 14/54 (25%), Positives = 27/54 (50%)
Query: 277 RRCLETGVVLLDLDEKDLPGVAYRVVESMVTEGLIEEDDKPVVMRSLLLRHRHV 330
R+ T + L+ +DL ++E +TEG++E + P + R + H+ V
Sbjct: 380 RKFTATASLTKKLERQDLKAKYAEIIEEQITEGIVEAAEGPSIGREFYIPHKPV 433
>SB_46399| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 32.3 bits (70), Expect = 0.67
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 252 DVEEGSARWGRPHVASLSFHSLLNLRRCLETGVVLLDLDEKD-LPGVAYRVVESMVTEGL 310
D+ +A+WG H+ H+ R+ L L LD D L VA+++V + + G+
Sbjct: 132 DITTVAAKWGFDHIGDEDAHTFPGKRQLLS---FLSWLDYVDQLSNVAHKLVANALAVGV 188
Query: 311 IEEDDKPVVMRSLL 324
E +PV+ +SL+
Sbjct: 189 RERFLQPVIEQSLM 202
>SB_21302| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-27)
Length = 1290
Score = 31.9 bits (69), Expect = 0.88
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Query: 201 ELQIRTRQAVSGAPVMRCVTLQV-FVQLDEL--LATEDGEAEWKETARWIKYEEDV---E 254
+ I ++ + ++ C T QV + +L +L L ED ++T + +++E + E
Sbjct: 532 DYNISGKEPIDIGNMLSCQTTQVDYEELFKLDILGLEDAPTNSQDTG-YQEFKEQLARDE 590
Query: 255 EGSARWGRPHVASLSFHSLLNLRRCLETGVVLLD-LDEKDLPGVAYRVVESMVTEGLIEE 313
G G P H N L+ L L+ +DL ++E +TEG++E
Sbjct: 591 NGCYETGLPWKGD---HPPSNKAGSLQRLASLTKKLERQDLKAKYAEIIEEQITEGIVEA 647
Query: 314 DDKPVVMRSLLLRHRHV 330
+ P + R + H+ V
Sbjct: 648 AEGPSIGREFYIPHKPV 664
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 31.5 bits (68), Expect = 1.2
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 121 SLQEGGERTASDDEGLEESQRDQLSHRTDDPRALRRHKIQPKTSTVHVGRKDGGDKVQNI 180
S Q G RTA EGL ++ + T+ P+ALR ++ T + ++
Sbjct: 3 SYQNKGLRTAEHPEGLRAAELPKGIRTTEHPKALRTAELPKGIRTTEHSKALRTAELPKA 62
Query: 181 LPDATYKKMY--DHSPHAVSDAELQIRTRQAVSGAPVMRCVT 220
L + K + P A+ AEL R P++ VT
Sbjct: 63 LRTNEHPKALRTNEHPRALRTAELPKALRTPTGNRPLLLLVT 104
>SB_54041| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-11)
Length = 1461
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 289 LDEKDLPGVAYRVVESMVTEGLIEEDDKPVVMRSLLLRHRHV 330
L+ +DL ++E +TEG++E + P + R + H+ V
Sbjct: 524 LERQDLTAKYAEIIEEQITEGIVEAAEGPSIGREFYIPHKPV 565
>SB_39193| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.029)
Length = 1769
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 289 LDEKDLPGVAYRVVESMVTEGLIEEDDKPVVMRSLLLRHRHV 330
L+ +DL ++E +TEG++E + P + R + H+ V
Sbjct: 1160 LERQDLTAKYAEIIEEQITEGIVEAAEGPSIGREFYIPHKAV 1201
>SB_2213| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8e-26)
Length = 840
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 289 LDEKDLPGVAYRVVESMVTEGLIEEDDKPVVMRSLLLRHRHV 330
L+ +DL ++E +TEG++E + P + R + H+ V
Sbjct: 80 LERQDLTAKYAEIIEEQITEGIVEAAEGPSIGREFYIPHKPV 121
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 127 ERTASDDEGLEESQRD-QLSHRTDDPRALRRHKIQPKTSTVHVG----RKDGGDKVQNIL 181
ER +E L+E +R + S TD+P+ + ++ + K + R + G+KVQ +L
Sbjct: 1286 ERVKQMEEKLKELERQSKQSEETDNPKVIESYEDKIKALEKEISNLKDRNNNGEKVQELL 1345
Query: 182 PDATY 186
TY
Sbjct: 1346 HKVTY 1350
>SB_30241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.5 bits (63), Expect = 4.7
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 123 QEGGERTASDDEGLE-ESQRDQLSHRTDDPRALRRHKIQPKTSTVHVGRKDGGDKVQNIL 181
+EG E+ EG E E + Q R RR++ +P+ + G K GD Q
Sbjct: 146 EEGEEKNGEVREGEEAEGEEGQKGDGPRRRRRFRRYRRKPRQEGENEGGKPNGDVEQAKA 205
Query: 182 PDAT 185
P AT
Sbjct: 206 PPAT 209
>SB_19469| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00048)
Length = 1347
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 289 LDEKDLPGVAYRVVESMVTEGLIEEDDKPVVMRSLLLRHRHV 330
L+++DL ++E +TEG++E + P + R + + V
Sbjct: 972 LEQQDLTAKYAEIIEEQITEGIVEAAEGPSIGREFYIPQKPV 1013
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 128 RTASDDEGLEESQRDQLSHRTDDPRALRR 156
R D EGLE R + R DDPR RR
Sbjct: 640 RPYDDPEGLERESRGERDVRRDDPREDRR 668
>SB_7968| Best HMM Match : RVT_1 (HMM E-Value=0.25)
Length = 376
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 180 ILPDATYKKMYDHSPHAVSDAELQIRTRQAVSGAPVMRC 218
++ +TY + + H P S+ L+ TR+ + G M+C
Sbjct: 11 VMSKSTYMQKFSHIPLLPSETVLRTYTRETLEGCGEMQC 49
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.132 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,002,027
Number of Sequences: 59808
Number of extensions: 460536
Number of successful extensions: 1153
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1140
Number of HSP's gapped (non-prelim): 16
length of query: 378
length of database: 16,821,457
effective HSP length: 83
effective length of query: 295
effective length of database: 11,857,393
effective search space: 3497930935
effective search space used: 3497930935
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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