Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002073-TA|BGIBMGA002073-PA|IPR003020|HCO3- transporter,
eukaryote, IPR013769|HCO3- transporter, cytoplasmic
(378 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical pr... 103 2e-22
DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium depend... 103 2e-22
AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion transpo... 103 2e-22
AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transpor... 103 2e-22
U40947-4|AAZ32798.1| 883|Caenorhabditis elegans Anion/bicarbona... 36 0.062
U40947-3|AAZ32797.1| 956|Caenorhabditis elegans Anion/bicarbona... 36 0.062
AY954522-1|AAX34430.1| 936|Caenorhabditis elegans anion transpo... 36 0.062
AY887906-1|AAX34418.1| 956|Caenorhabditis elegans anion transpo... 36 0.062
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 30 3.1
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 30 3.1
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 30 3.1
U13643-3|AAA21086.3| 394|Caenorhabditis elegans Brca homolog (t... 30 3.1
AY523518-1|AAR98640.1| 394|Caenorhabditis elegans potential BRC... 30 3.1
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 30 3.1
>Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical
protein F52B5.1 protein.
Length = 1119
Score = 103 bits (247), Expect = 2e-22
Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 5/138 (3%)
Query: 197 VSDAELQIRTRQAVSGAPVMRCVTLQVFVQLDELLATEDGEA---EWKETARWIKYEEDV 253
+S A + ++ + S AP R + L + L TE GE EW+ETARW+K+EEDV
Sbjct: 9 MSKARRESQSIELSSLAPGTRVMFLLKEKENTPALFTEMGELNNEEWRETARWVKFEEDV 68
Query: 254 EEGSARWGRPHVASLSFHSLLNLRRCLETGVVLLDLDEKDLPGVAYRVVESMVTEGLIEE 313
E+G RW +PHVA+LS HSL LR C+ G + DL E D+P + V+E++ G +
Sbjct: 69 EQGGNRWSKPHVATLSLHSLFQLRSCIMNGHFMNDLAETDIPSIFNAVIENLEKSGDLPS 128
Query: 314 DDKPVVMRSLLLRHRHVH 331
+++ +R +LLR +HVH
Sbjct: 129 ENRE-ELREILLR-KHVH 144
>DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium dependent
chloride bicarbonateanion exchanger alternative variant
a protein.
Length = 1161
Score = 103 bits (247), Expect = 2e-22
Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 5/138 (3%)
Query: 197 VSDAELQIRTRQAVSGAPVMRCVTLQVFVQLDELLATEDGEA---EWKETARWIKYEEDV 253
+S A + ++ + S AP R + L + L TE GE EW+ETARW+K+EEDV
Sbjct: 51 MSKARRESQSIELSSLAPGTRVMFLLKEKENTPALFTEMGELNNEEWRETARWVKFEEDV 110
Query: 254 EEGSARWGRPHVASLSFHSLLNLRRCLETGVVLLDLDEKDLPGVAYRVVESMVTEGLIEE 313
E+G RW +PHVA+LS HSL LR C+ G + DL E D+P + V+E++ G +
Sbjct: 111 EQGGNRWSKPHVATLSLHSLFQLRSCIMNGHFMNDLAETDIPSIFNAVIENLEKSGDLPS 170
Query: 314 DDKPVVMRSLLLRHRHVH 331
+++ +R +LLR +HVH
Sbjct: 171 ENRE-ELREILLR-KHVH 186
>AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion
transporter ABTS-1 protein.
Length = 1119
Score = 103 bits (247), Expect = 2e-22
Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 5/138 (3%)
Query: 197 VSDAELQIRTRQAVSGAPVMRCVTLQVFVQLDELLATEDGEA---EWKETARWIKYEEDV 253
+S A + ++ + S AP R + L + L TE GE EW+ETARW+K+EEDV
Sbjct: 9 MSKARRESQSIELSSLAPGTRVMFLLKEKENTPALFTEMGELNNEEWRETARWVKFEEDV 68
Query: 254 EEGSARWGRPHVASLSFHSLLNLRRCLETGVVLLDLDEKDLPGVAYRVVESMVTEGLIEE 313
E+G RW +PHVA+LS HSL LR C+ G + DL E D+P + V+E++ G +
Sbjct: 69 EQGGNRWSKPHVATLSLHSLFQLRSCIMNGHFMNDLAETDIPSIFNAVIENLEKSGDLPS 128
Query: 314 DDKPVVMRSLLLRHRHVH 331
+++ +R +LLR +HVH
Sbjct: 129 ENRE-ELREILLR-KHVH 144
>AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transporter
protein.
Length = 1119
Score = 103 bits (247), Expect = 2e-22
Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 5/138 (3%)
Query: 197 VSDAELQIRTRQAVSGAPVMRCVTLQVFVQLDELLATEDGEA---EWKETARWIKYEEDV 253
+S A + ++ + S AP R + L + L TE GE EW+ETARW+K+EEDV
Sbjct: 9 MSKARRESQSIELSSLAPGTRVMFLLKEKENTPALFTEMGELNNEEWRETARWVKFEEDV 68
Query: 254 EEGSARWGRPHVASLSFHSLLNLRRCLETGVVLLDLDEKDLPGVAYRVVESMVTEGLIEE 313
E+G RW +PHVA+LS HSL LR C+ G + DL E D+P + V+E++ G +
Sbjct: 69 EQGGNRWSKPHVATLSLHSLFQLRSCIMNGHFMNDLAETDIPSIFNAVIENLEKSGDLPS 128
Query: 314 DDKPVVMRSLLLRHRHVH 331
+++ +R +LLR +HVH
Sbjct: 129 ENRE-ELREILLR-KHVH 144
>U40947-4|AAZ32798.1| 883|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 4, isoform b protein.
Length = 883
Score = 35.5 bits (78), Expect = 0.062
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 229 ELLATEDGEAEWKETARWIKYEEDVEEGSARWGRPHV 265
++ + + WK+ +R+ +YEED E GRPHV
Sbjct: 77 DVFTVNNDDGTWKQASRFARYEEDCEGFDNHLGRPHV 113
>U40947-3|AAZ32797.1| 956|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 4, isoform a protein.
Length = 956
Score = 35.5 bits (78), Expect = 0.062
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 229 ELLATEDGEAEWKETARWIKYEEDVEEGSARWGRPHV 265
++ + + WK+ +R+ +YEED E GRPHV
Sbjct: 77 DVFTVNNDDGTWKQASRFARYEEDCEGFDNHLGRPHV 113
>AY954522-1|AAX34430.1| 936|Caenorhabditis elegans anion
transporter ABTS-4b protein.
Length = 936
Score = 35.5 bits (78), Expect = 0.062
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 229 ELLATEDGEAEWKETARWIKYEEDVEEGSARWGRPHV 265
++ + + WK+ +R+ +YEED E GRPHV
Sbjct: 77 DVFTVNNDDGTWKQASRFARYEEDCEGFDNHLGRPHV 113
>AY887906-1|AAX34418.1| 956|Caenorhabditis elegans anion
transporter ABTS-4a protein.
Length = 956
Score = 35.5 bits (78), Expect = 0.062
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 229 ELLATEDGEAEWKETARWIKYEEDVEEGSARWGRPHV 265
++ + + WK+ +R+ +YEED E GRPHV
Sbjct: 77 DVFTVNNDDGTWKQASRFARYEEDCEGFDNHLGRPHV 113
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 29.9 bits (64), Expect = 3.1
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Query: 113 HGHKSRKYSLQEGGERTASDDEGLEESQRDQLSHRTDDPRALRRHKIQPKTSTVHVGRKD 172
H H+ + + Q+ +R A+ + E QR+Q + R+H+ Q +H ++
Sbjct: 376 HQHQQKMIAEQQQQQRHAAAQQLREREQREQRERERE-----RQHQ-QQAQQALHQQQQQ 429
Query: 173 GGDKVQNILPDATYKKMYDHSPHAVSDAELQIRTRQAVSGAPVMRCVTLQVFVQLDELLA 232
N L A + M + A S ++ R + + + Q Q D+
Sbjct: 430 HAAAAANQLNPAMMQMMALMANSAASQQDI-ARLMEMAAQQQQQQQQAAQAQAQRDQERE 488
Query: 233 TEDGEAEWKETARWIKYEEDVEEGSAR 259
+ EA +E AR + E+ E +AR
Sbjct: 489 RREREAREREAAREREREQAAREAAAR 515
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defective
protein 27,isoform b protein.
Length = 1124
Score = 29.9 bits (64), Expect = 3.1
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Query: 113 HGHKSRKYSLQEGGERTASDDEGLEESQRDQLSHRTDDPRALRRHKIQPKTSTVHVGRKD 172
H H+ + + Q+ +R A+ + E QR+Q + R+H+ Q +H ++
Sbjct: 888 HQHQQKMIAEQQQQQRHAAAQQLREREQREQRERERE-----RQHQ-QQAQQALHQQQQQ 941
Query: 173 GGDKVQNILPDATYKKMYDHSPHAVSDAELQIRTRQAVSGAPVMRCVTLQVFVQLDELLA 232
N L A + M + A S ++ R + + + Q Q D+
Sbjct: 942 HAAAAANQLNPAMMQMMALMANSAASQQDI-ARLMEMAAQQQQQQQQAAQAQAQRDQERE 1000
Query: 233 TEDGEAEWKETARWIKYEEDVEEGSAR 259
+ EA +E AR + E+ E +AR
Sbjct: 1001 RREREAREREAAREREREQAAREAAAR 1027
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defective
protein 27,isoform a protein.
Length = 1129
Score = 29.9 bits (64), Expect = 3.1
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Query: 113 HGHKSRKYSLQEGGERTASDDEGLEESQRDQLSHRTDDPRALRRHKIQPKTSTVHVGRKD 172
H H+ + + Q+ +R A+ + E QR+Q + R+H+ Q +H ++
Sbjct: 893 HQHQQKMIAEQQQQQRHAAAQQLREREQREQRERERE-----RQHQ-QQAQQALHQQQQQ 946
Query: 173 GGDKVQNILPDATYKKMYDHSPHAVSDAELQIRTRQAVSGAPVMRCVTLQVFVQLDELLA 232
N L A + M + A S ++ R + + + Q Q D+
Sbjct: 947 HAAAAANQLNPAMMQMMALMANSAASQQDI-ARLMEMAAQQQQQQQQAAQAQAQRDQERE 1005
Query: 233 TEDGEAEWKETARWIKYEEDVEEGSAR 259
+ EA +E AR + E+ E +AR
Sbjct: 1006 RREREAREREAAREREREQAAREAAAR 1032
>U13643-3|AAA21086.3| 394|Caenorhabditis elegans Brca homolog
(tumor suppressorgene brca1) protein 2 protein.
Length = 394
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 215 VMRCVTLQVFVQLDELLATEDGEAEWKETARWIKYEEDVEEGSARWGRP 263
V R V +++ DE T+ E +WK+ ++K++ED ++ ++ P
Sbjct: 346 VFRPVMVEIEKSNDEWECTDVAEVDWKDFGSYLKHKEDKKKRRSKKKHP 394
>AY523518-1|AAR98640.1| 394|Caenorhabditis elegans potential
BRCA2-like protein (44.7kD) (3H990) protein.
Length = 394
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/49 (26%), Positives = 27/49 (55%)
Query: 215 VMRCVTLQVFVQLDELLATEDGEAEWKETARWIKYEEDVEEGSARWGRP 263
V R V +++ DE T+ E +WK+ ++K++ED ++ ++ P
Sbjct: 346 VFRPVMVEIEKSNDEWECTDVAEVDWKDFGSYLKHKEDKKKRRSKKKHP 394
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 29.9 bits (64), Expect = 3.1
Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Query: 113 HGHKSRKYSLQEGGERTASDDEGLEESQRDQLSHRTDDPRALRRHKIQPKTSTVHVGRKD 172
H H+ + + Q+ +R A+ + E QR+Q + R+H+ Q +H ++
Sbjct: 893 HQHQQKMIAEQQQQQRHAAAQQLREREQREQRERERE-----RQHQ-QQAQQALHQQQQQ 946
Query: 173 GGDKVQNILPDATYKKMYDHSPHAVSDAELQIRTRQAVSGAPVMRCVTLQVFVQLDELLA 232
N L A + M + A S ++ R + + + Q Q D+
Sbjct: 947 HAAAAANQLNPAMMQMMALMANSAASQQDI-ARLMEMAAQQQQQQQQAAQAQAQRDQERE 1005
Query: 233 TEDGEAEWKETARWIKYEEDVEEGSAR 259
+ EA +E AR + E+ E +AR
Sbjct: 1006 RREREAREREAAREREREQAAREAAAR 1032
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.132 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,563,184
Number of Sequences: 27539
Number of extensions: 330517
Number of successful extensions: 840
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 830
Number of HSP's gapped (non-prelim): 18
length of query: 378
length of database: 12,573,161
effective HSP length: 83
effective length of query: 295
effective length of database: 10,287,424
effective search space: 3034790080
effective search space used: 3034790080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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