GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002071-TA|BGIBMGA002071-PA|IPR002698|5-
formyltetrahydrofolate cyclo-ligase
         (196 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   6.5  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   8.6  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 11/18 (61%), Positives = 12/18 (66%)

Query: 65  APLIKHIQARGAAAFVPQ 82
           A L +HI A  AAAF PQ
Sbjct: 106 ATLRQHIPASVAAAFAPQ 123


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/18 (61%), Positives = 11/18 (61%)

Query: 72  QARGAAAFVPQYAGGRMR 89
           Q R AA  VPQ AGG  R
Sbjct: 313 QRRVAAVQVPQLAGGGRR 330


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
          peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 41 INHSWYKSSSRIALYMSTENEIDTAP 66
          +  SW KS+S +A +    +E  T P
Sbjct: 9  VGQSWLKSNSSLAGFEVNSSEQLTTP 34


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 65  APLIKHIQARGAAAFVPQYAGGRMRMLHLET 95
           A L +HI    AAAF     GG  ++  +ET
Sbjct: 73  ANLRQHIPNFIAAAFESNSRGGNKKLSKVET 103


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.132    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,299
Number of Sequences: 317
Number of extensions: 1809
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 196
length of database: 114,650
effective HSP length: 54
effective length of query: 142
effective length of database: 97,532
effective search space: 13849544
effective search space used: 13849544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)