GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002068-TA|BGIBMGA002068-PA|undefined
         (56 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118675-1|AAM50535.1| 1073|Drosophila melanogaster AT05180p pro...    26   7.2  
AE014297-1565|AAF54847.1| 1059|Drosophila melanogaster CG14395-P...    26   7.2  

>AY118675-1|AAM50535.1| 1073|Drosophila melanogaster AT05180p
           protein.
          Length = 1073

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 9   RGTASGASMRSARSKPRVPKDPRMLGSNIFTE 40
           RG+ASGA  RS R K RV        SN+  E
Sbjct: 395 RGSASGAPSRSGRKK-RVSNSSLSSHSNVINE 425


>AE014297-1565|AAF54847.1| 1059|Drosophila melanogaster CG14395-PA
           protein.
          Length = 1059

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)

Query: 9   RGTASGASMRSARSKPRVPKDPRMLGSNIFTE 40
           RG+ASGA  RS R K RV        SN+  E
Sbjct: 395 RGSASGAPSRSGRKK-RVSNSSLSSHSNVINE 425


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.132    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,251,877
Number of Sequences: 52641
Number of extensions: 57000
Number of successful extensions: 194
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 194
Number of HSP's gapped (non-prelim): 2
length of query: 56
length of database: 24,830,863
effective HSP length: 37
effective length of query: 19
effective length of database: 22,883,146
effective search space: 434779774
effective search space used: 434779774
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)