Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002067-TA|BGIBMGA002067-PA|IPR007965|Protein of unknown
function DUF738
(285 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0392 + 24629528-24630442 35 0.065
11_04_0387 - 17037150-17037661,17038194-17038324,17038395-17038453 30 1.9
07_01_0853 + 6982185-6983593,6985926-6986497,6987139-6988439 29 4.3
11_04_0471 - 18121023-18121213,18121954-18122080,18122221-181222... 29 5.6
08_02_0747 - 20728073-20728081,20728167-20728353,20728810-207289... 29 5.6
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 28 7.5
08_02_1240 + 25504789-25504794,25505421-25505555,25505854-255059... 28 7.5
04_04_1110 + 30973202-30973870 28 7.5
07_01_0901 + 7578143-7578327,7578430-7578455,7578576-7578606,757... 28 9.9
>05_05_0392 + 24629528-24630442
Length = 304
Score = 35.1 bits (77), Expect = 0.065
Identities = 21/78 (26%), Positives = 28/78 (35%)
Query: 131 KRNYGVERLVRQNNNFAVSPKFFTFTTAELNKAGRPVSSLPPVIGRFAAPRRPSAIANVI 190
+R G ER + + A T T G+P V G RR A +
Sbjct: 101 RRAVGAERATSEKSEAASESSVATTATGPERSPGKPARKRAVVSGELGRARRDRGPAAAV 160
Query: 191 HGGNGLGYRQDSPNGPAP 208
HG G + SP+ P P
Sbjct: 161 HGAGRPGGGRASPSPPPP 178
>11_04_0387 - 17037150-17037661,17038194-17038324,17038395-17038453
Length = 233
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 142 QNNNFAVSPKFFTFTTAELNKAGRPVSSLPPVIGRFAAP-RRPSAIANVIHGGNGLG 197
Q N F+V P+ F + RP+ PP F+ R P + GG+GLG
Sbjct: 63 QANQFSVYPQTFPIADQNADALMRPLDRHPPFSISFSGTFREPKQFPFMQDGGSGLG 119
>07_01_0853 + 6982185-6983593,6985926-6986497,6987139-6988439
Length = 1093
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 28 TTGEKLRLCPSHVVYILKDKDAKNGEGEAV 57
T EK RL PS+ Y L+ ++AK EG+ V
Sbjct: 364 TKPEKRRLAPSNYRYFLRGQNAKAKEGDLV 393
>11_04_0471 -
18121023-18121213,18121954-18122080,18122221-18122253,
18122969-18123009,18123415-18123484,18123626-18123744,
18123876-18123942,18124735-18124809,18125023-18125050,
18125130-18125179,18125679-18125741,18125829-18125870,
18126000-18126078,18127233-18127368,18128013-18128517,
18129238-18129372
Length = 586
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 64 RKHLFLFDDK-EQVRELEPLCVLDFYVV-CNRQRTGCGKKLFDFM--LKDTESDVHALAI 119
RK L +DK E++ L+ + C TG LF L+DTE VH L +
Sbjct: 350 RKALISKNDKSEEIATLQKQLQASILIFPCQNMNTGLHLLLFPLSDDLEDTERFVHELTV 409
Query: 120 DGPSHKMEQFLKRNYGVERL 139
+E L + G++ L
Sbjct: 410 TAGEGNIETMLSVDKGLQEL 429
>08_02_0747 -
20728073-20728081,20728167-20728353,20728810-20728913,
20729008-20729139,20729583-20729810,20730263-20730358,
20730440-20730511,20730588-20730760,20730947-20731000,
20731086-20731134,20731228-20731326,20731420-20731511,
20731607-20731832,20731927-20732100,20732186-20732809,
20732890-20733033,20733108-20733218,20733516-20733650,
20733963-20733989
Length = 911
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 110 TESDVHALAIDGPSHKMEQFLKRNYGVERLVRQNNNFAVSPKFFTFTTAELNKAGRPVSS 169
T+ H + P H E + N V + V++NNNF SPK + T + +K P
Sbjct: 472 TQPTTHENSGIEPDH--EPVEENNDDVNQAVQKNNNFTSSPKGNSKTVLDDDKLPIPNEE 529
Query: 170 LPPV 173
PV
Sbjct: 530 FNPV 533
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 110 TESDVHALAIDGPSHKMEQFLKRNYGVERLVRQNN 144
+E + I+G SH ME+ ++N +E L+ +NN
Sbjct: 517 SERSMFIARIEGISHTMEKLSEKNVFLENLLSENN 551
>08_02_1240 +
25504789-25504794,25505421-25505555,25505854-25505964,
25506091-25506183,25506264-25506884,25506970-25507143,
25507239-25507464,25507560-25507651,25507744-25507842,
25507936-25507984,25508071-25508124,25508312-25508484,
25508561-25508632,25508713-25508808,25509032-25509048,
25509704-25509875,25509973-25510071,25510381-25510484,
25510940-25511126,25511212-25511220
Length = 862
Score = 28.3 bits (60), Expect = 7.5
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 122 PSHKMEQFLKRNYGVERLVRQNNNFAVSPKFFTFTTAELNKAGRPVSSLPPV 173
P H E + N V + V++NNNF SPK + T + +K P PV
Sbjct: 459 PDH--EPVEENNDDVNQAVKKNNNFTSSPKGNSKTILDDDKLPIPNEEFNPV 508
>04_04_1110 + 30973202-30973870
Length = 222
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 230 AGVGPVPTRPSQLEMEEACAALFDEPSPAGSSTSRRDS 267
A PVP RP+ + +++ A L DE S GSS+S D+
Sbjct: 167 AVAAPVPRRPAVVSVKKEVARL-DEQSDTGSSSSVVDA 203
>07_01_0901 +
7578143-7578327,7578430-7578455,7578576-7578606,
7578690-7578777,7578889-7579034,7579641-7579685,
7579776-7579879,7579976-7580112,7580553-7580654,
7581375-7581587
Length = 358
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Query: 230 AGVGPVPTRPSQLEMEEACAALFDEPSPAGSSTSRRDSQLTDRGYFDVKFY 280
AG GP P R + L + ++ + SPAG SRR + Y V FY
Sbjct: 7 AGEGPWPRRAADLGVAQS------QRSPAGGKKSRRGPRSRSSQYRGVTFY 51
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.137 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,625,821
Number of Sequences: 37544
Number of extensions: 385913
Number of successful extensions: 841
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 838
Number of HSP's gapped (non-prelim): 9
length of query: 285
length of database: 14,793,348
effective HSP length: 81
effective length of query: 204
effective length of database: 11,752,284
effective search space: 2397465936
effective search space used: 2397465936
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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