Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002066-TA|BGIBMGA002066-PA|IPR001054|Adenylyl cyclase
class-3/4/guanylyl cyclase
(731 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.11
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 30 0.99
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 29 3.0
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 29 3.0
SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr 1|||M... 28 4.0
SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces ... 28 5.3
SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD subfamily|Sch... 28 5.3
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 27 7.0
SPCC1739.15 |wtf21|SPCC1739.15, SPCC1739.15|wtf element Wtf21|Sc... 27 9.3
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.11
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 520 DSIPDDIYNNPIPSTSSEGAVPPRPEHRPLDTL-SEAHTDEDGGPS-PRASIP 570
DSI +D N PSTS+ PP +DTL S AH D D P+ PR P
Sbjct: 717 DSIDEDKQNEVDPSTSARALPPPGLRFGKVDTLASLAHDDLDDLPAVPRIFSP 769
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 30.3 bits (65), Expect = 0.99
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 424 RVEPGGALIVRRVPAGINIGPVVAGVIGARKPQYDIWGNAVNVASRMDSTGLLDHIQVT- 482
R G + + V I I P + G + W + + R+ + I V+
Sbjct: 80 RASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRNKELISVSA 139
Query: 483 -QEVYDIL--SARGYKLRCRGTVDVKGKGNMVTYFLEGVGDSIPDDIYNNPIPSTSSEGA 539
++ + S +GY L + GKG Y+++ G + D+++ ST + G
Sbjct: 140 ASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYYIDSDGTRLKGDLFSVGSGSTFAYGV 199
Query: 540 V 540
+
Sbjct: 200 L 200
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 651 ASARRNSTREALAAPHQQGDQSRRLHLQEEAQQVAIE 687
A A R + EA A ++ + R LH QEEAQ+ AIE
Sbjct: 787 AEAIREAEEEAARAAEEEAN--RELHEQEEAQKRAIE 821
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 312 ELEGNNEGVECLRLLNEIIADFDEILAEE 340
E EGN EG+E EI+ D + LA E
Sbjct: 92 EQEGNAEGIEAAEAYKEIVYDLQKNLASE 120
>SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 757
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 300 FASIPNFSEFYVELEGNNEGVECLRLL 326
F S P+ Y +L+G GV+CL LL
Sbjct: 385 FNSSPDLQAVYPKLKGGGNGVQCLPLL 411
>SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 862
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 294 DSVCVMFASIPNFSEFYVELEGNNEGVECLRLLNEIIADFDEILAEEPFKYIEKIKSTGA 353
D + +FASI + +E+ + EG+++ + L L I +++ K +E K +
Sbjct: 610 DEIFTLFASIFDLNEYRISKEGSSDELSTL-LERSTIQSIKS--SKKISKDVENEKGSIL 666
Query: 354 TYMAASGLTNSTQDLVGYRHVTAMADYALRLREQLQYVNE 393
+ S L ST L H + ++ LR + + Y+N+
Sbjct: 667 GFSRKSSLKRSTV-LSKKSHSSYKENFQLRRGKTVSYLNQ 705
>SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD
subfamily|Schizosaccharomyces pombe|chr 1|||Manual
Length = 887
Score = 27.9 bits (59), Expect = 5.3
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 288 LYHEQCDSVCVMFASIPNFSEFYVELEGNNEGVECLRLLNEIIADFDEILAEEPFKYIEK 347
LY SV MFA + N S+ ++ +G E R + E F+E +A E + +
Sbjct: 639 LYLSSFKSVTGMFADMQN-SDNVQDVSPFLKGEEMKRWVMESEIVFNEKIASEIGTILGR 697
Query: 348 I---KSTGATYMAASGLTNSTQ-DLVGYRHVTAMADYALRLREQLQYVNEHS 395
K T + + ++ N T+ + +G++ +A+ L+ RE+++ VN+++
Sbjct: 698 KSYGKITNLSGIGSNANHNGTKFENLGFQCCRVLAEAELKKRERVKSVNDYN 749
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/55 (32%), Positives = 23/55 (41%)
Query: 522 IPDDIYNNPIPSTSSEGAVPPRPEHRPLDTLSEAHTDEDGGPSPRASIPMVNTRK 576
+ D+ P ST S+ AVP + + S D PS R S P VN K
Sbjct: 631 VVDNQQPQPKISTVSDTAVPSMSFANNISSRSVISAATDSKPSTRTSPPFVNNTK 685
>SPCC1739.15 |wtf21|SPCC1739.15, SPCC1739.15|wtf element
Wtf21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 329
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 525 DIYNNPIPSTSSE--GAVPPRPEHRPLDTLSEAHTDEDGGPSPRASIPMV 572
D+ P+P SE GA+PP +H ++ H + + S S P +
Sbjct: 25 DLEKGPLPEYDSEEEGALPPYSDHALVNNPPNTHRENNPSRSTDNSSPFL 74
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.136 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,969,189
Number of Sequences: 5004
Number of extensions: 116306
Number of successful extensions: 306
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 299
Number of HSP's gapped (non-prelim): 11
length of query: 731
length of database: 2,362,478
effective HSP length: 78
effective length of query: 653
effective length of database: 1,972,166
effective search space: 1287824398
effective search space used: 1287824398
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -