GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002065-TA|BGIBMGA002065-PA|IPR009398|Adenylate
cyclase-like
         (81 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   2.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   3.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   3.8  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    19   5.1  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     19   6.7  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)

Query: 57  LRYHITTHNTLNTAGSSEKPS 77
           L  H+ THN     GSS+  S
Sbjct: 390 LAKHVKTHNGNGKKGSSDSCS 410


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 1    MGADAGADNKKPEDEVNEYLMKAIDARSIDRLRAEHCRPFTLTFRDAHLERKV 53
            +GA+A  D    E  VN+     I     D    E  R    + RD  L RK+
Sbjct: 1066 LGANAQDDEGGLEFSVNKLFKCMICTYKADNKENEQLRKIQESLRD--LNRKI 1116


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 1    MGADAGADNKKPEDEVNEYLMKAIDARSIDRLRAEHCRPFTLTFRDAHLERKV 53
            +GA+A  D    E  VN+     I     D    E  R    + RD  L RK+
Sbjct: 1066 LGANAQDDEGGLEFSVNKLFKCMICTYKADNKENEQLRKIQESLRD--LNRKI 1116


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 6/14 (42%), Positives = 11/14 (78%)

Query: 3   ADAGADNKKPEDEV 16
           +D+GA +  P+DE+
Sbjct: 135 SDSGASSADPDDEL 148


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 27  RSIDRLRAEHCRP 39
           + ++RLR E C P
Sbjct: 175 KHLERLREERCDP 187


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.131    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,968
Number of Sequences: 317
Number of extensions: 483
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 81
length of database: 114,650
effective HSP length: 46
effective length of query: 35
effective length of database: 100,068
effective search space:  3502380
effective search space used:  3502380
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
S2: 36 (18.6 bits)