GeneModel BLAST Result against spombe

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002065-TA|BGIBMGA002065-PA|IPR009398|Adenylate
cyclase-like
         (81 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC22H10.08 |||DUF2009 protein|Schizosaccharomyces pombe|chr 1|...    24   2.9  
SPAC24B11.07c |||ketopantoate reductase |Schizosaccharomyces pom...    23   5.1  
SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein Mc...    23   6.7  
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c...    23   6.7  

>SPAC22H10.08 |||DUF2009 protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 492

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 14  DEVNEYLMKAIDARSIDRLRAEHCRPFTLTFRDAHLERKVRGRL 57
           D V++    AIDA +  RL+  H + +    +  HL   + G +
Sbjct: 271 DTVDDEFTLAIDAINGSRLKHSHYKQYHYVVQSLHLWLLIMGEI 314


>SPAC24B11.07c |||ketopantoate reductase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 561

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 1   MGADAGADNKKPEDEVNEYLMKA-IDARSIDRLRAEHCRPFTLTFRDAHLERKVRGRL 57
           +G +     + PE+ +   +    +  RS+D      C PF L    ++LE     RL
Sbjct: 123 IGVEEALQRQYPENPIFSLITHTPVSQRSVDEFFFGDCAPFYLAPAGSNLEIDQLSRL 180


>SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein
           Mcp7|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 210

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 11/51 (21%), Positives = 27/51 (52%), Gaps = 7/51 (13%)

Query: 8   DNKKPEDEVNEYLMKAIDAR--SIDRLRAE-----HCRPFTLTFRDAHLER 51
           DN+  E++ N+Y ++ + A+   +  L+ +     HC P T   ++ + ++
Sbjct: 113 DNEGTENDANQYTLELLHAKESELKLLKTQLSNLNHCNPETFELKNENTKK 163


>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces
          pombe|chr 1|||Manual
          Length = 1142

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 65 NTLNTAGSSEKPSVKQ 80
          N  NTA + EKP+++Q
Sbjct: 29 NNANTASNDEKPNLEQ 44


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.317    0.131    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,086
Number of Sequences: 5004
Number of extensions: 10893
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 4
length of query: 81
length of database: 2,362,478
effective HSP length: 60
effective length of query: 21
effective length of database: 2,062,238
effective search space: 43306998
effective search space used: 43306998
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)