GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002065-TA|BGIBMGA002065-PA|IPR009398|Adenylate
cyclase-like
         (81 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-4|AAA68738.1|  646|Caenorhabditis elegans Hypothetical pr...    27   1.2  
Z48334-7|CAB54223.2|  608|Caenorhabditis elegans Hypothetical pr...    25   6.3  
U00032-10|AAA50637.1|  418|Caenorhabditis elegans Hypothetical p...    25   8.4  
AF067618-6|AAC19197.1| 1192|Caenorhabditis elegans Hypothetical ...    25   8.4  
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a...    25   8.4  

>U29380-4|AAA68738.1|  646|Caenorhabditis elegans Hypothetical
           protein ZK546.5 protein.
          Length = 646

 Score = 27.5 bits (58), Expect = 1.2
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 10/56 (17%)

Query: 11  KPEDEVNEYLMKAIDARSIDRLRAEHCRPFTLTFRDAHLERKVRGRLRYHITTHNT 66
           K  DE+   L+  + A  +  L  E C   +L F D        G+LR H+T+H+T
Sbjct: 252 KKNDELRLQLIDRLGAHEVQNLTCELC---SLVFPDD-------GKLRAHVTSHHT 297


>Z48334-7|CAB54223.2|  608|Caenorhabditis elegans Hypothetical
           protein F10B5.8 protein.
          Length = 608

 Score = 25.0 bits (52), Expect = 6.3
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 14  DEVNEYLMKAIDARSIDRLRAEHCRPFTLTFRDAHLERKV 53
           D+ NE L     A S D ++ ++C P TL+  +    +KV
Sbjct: 489 DQENERLNIMSTAESEDLIKDKNCMPITLSLSEIIKGKKV 528


>U00032-10|AAA50637.1|  418|Caenorhabditis elegans Hypothetical
           protein F37A4.9 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 8.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 5   AGADNKKPEDEVNEYLMKAIDARSIDRLRAEHCR 38
           AG   K  ED++ E L+ A+D   I+ LR E  R
Sbjct: 297 AGRVVKLEEDQLTEDLISAMDRLMINSLRDEVAR 330


>AF067618-6|AAC19197.1| 1192|Caenorhabditis elegans Hypothetical
            protein F56H1.5 protein.
          Length = 1192

 Score = 24.6 bits (51), Expect = 8.4
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 13   EDEVNEYLMKAIDARSIDRLRAEHCRPFTLTFRDAHLERKVRGRLRYHITTHNTLNT 69
            E+E++  L KA++A    R  A  CR F +T R      +V    ++ ++T  TL +
Sbjct: 1101 EEELHLALPKALEATCPSRFNASECR-FNIT-RAKESSARVNVWRQFGVSTAYTLES 1155


>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 192 protein.
          Length = 2957

 Score = 24.6 bits (51), Expect = 8.4
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)

Query: 4   DAGADNKKPEDEVNEYLMKAIDARSID 30
           +AG +  K +DE +E+LMK ID  + D
Sbjct: 944 EAGVEGAKSDDEDDEFLMK-IDTPAPD 969


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.317    0.131    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,888,399
Number of Sequences: 27539
Number of extensions: 59290
Number of successful extensions: 164
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 161
Number of HSP's gapped (non-prelim): 6
length of query: 81
length of database: 12,573,161
effective HSP length: 61
effective length of query: 20
effective length of database: 10,893,282
effective search space: 217865640
effective search space used: 217865640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)