GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002065-TA|BGIBMGA002065-PA|IPR009398|Adenylate
cyclase-like
         (81 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   2.6  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    21   2.6  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    21   2.6  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    21   2.6  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    21   2.6  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    21   2.6  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    21   2.6  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    21   2.6  
AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex det...    21   2.6  
AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex det...    21   2.6  
AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex det...    21   2.6  
AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex det...    21   2.6  
AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex det...    21   2.6  
AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex det...    21   2.6  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   2.6  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    21   2.6  
X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.           20   3.4  
AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex det...    20   3.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   4.5  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    19   5.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    19   5.9  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 11/29 (37%), Positives = 14/29 (48%)

Query: 46  DAHLERKVRGRLRYHITTHNTLNTAGSSE 74
           D H  R+ RG+LR  I +        SSE
Sbjct: 388 DKHPNRRARGQLRTKIESGEGTIPVKSSE 416


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
          determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38 RPFTLTFRDAHLERKVRGRLRYH 60
          R +  T R+   +R+ RGR R H
Sbjct: 57 REYRETSRERSRDRRERGRSREH 79


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
          determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38 RPFTLTFRDAHLERKVRGRLRYH 60
          R +  T R+   +R+ RGR R H
Sbjct: 57 REYRETSRERSRDRRERGRSREH 79


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
          determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38 RPFTLTFRDAHLERKVRGRLRYH 60
          R +  T R+   +R+ RGR R H
Sbjct: 57 REYRETSRERSRDRRERGRSREH 79


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
          determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38 RPFTLTFRDAHLERKVRGRLRYH 60
          R +  T R+   +R+ RGR R H
Sbjct: 57 REYRETSRERSRDRRERGRSREH 79


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
          determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38 RPFTLTFRDAHLERKVRGRLRYH 60
          R +  T R+   +R+ RGR R H
Sbjct: 57 REYRETSRERSRDRRERGRSREH 79


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
          determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38 RPFTLTFRDAHLERKVRGRLRYH 60
          R +  T R+   +R+ RGR R H
Sbjct: 57 REYRETSRERSRDRRERGRSREH 79


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
          determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38 RPFTLTFRDAHLERKVRGRLRYH 60
          R +  T R+   +R+ RGR R H
Sbjct: 57 REYRETSRERSRDRRERGRSREH 79


>AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38  RPFTLTFRDAHLERKVRGRLRYH 60
           R +  T R+   +R+ RGR R H
Sbjct: 306 REYRETSRERSRDRRERGRSREH 328


>AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38  RPFTLTFRDAHLERKVRGRLRYH 60
           R +  T R+   +R+ RGR R H
Sbjct: 306 REYRETSRERSRDRRERGRSREH 328


>AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38  RPFTLTFRDAHLERKVRGRLRYH 60
           R +  T R+   +R+ RGR R H
Sbjct: 306 REYRETSRERSRDRRERGRSREH 328


>AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38  RPFTLTFRDAHLERKVRGRLRYH 60
           R +  T R+   +R+ RGR R H
Sbjct: 306 REYRETSRERSRDRRERGRSREH 328


>AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38  RPFTLTFRDAHLERKVRGRLRYH 60
           R +  T R+   +R+ RGR R H
Sbjct: 306 REYRETSRERSRDRRERGRSREH 328


>AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38  RPFTLTFRDAHLERKVRGRLRYH 60
           R +  T R+   +R+ RGR R H
Sbjct: 306 REYRETSRERSRDRRERGRSREH 328


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38  RPFTLTFRDAHLERKVRGRLRYH 60
           R +  T R+   +R+ RGR R H
Sbjct: 306 REYRETSRERSRDRRERGRSREH 328


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
          finger domain-Z3 isoform protein.
          Length = 92

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query: 54 RGRLRYHITTHNTLNTAGSS 73
          R R +  +TTH +L   GSS
Sbjct: 44 RYRTKNSLTTHKSLQHRGSS 63


>X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.
          Length = 103

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 35 EHCRPFTLTFRDAHLERKVRGRLRY 59
          EH +  T+T  D     K++GR  Y
Sbjct: 75 EHTKRKTVTAMDVVYALKIQGRTLY 99


>AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 38  RPFTLTFRDAHLERKVRGRLRYH 60
           R +  T R+   +R+ RGR R H
Sbjct: 305 REYRETSRERSRDRRGRGRSREH 327


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.8 bits (39), Expect = 4.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 8   DNKKPEDEVNEYLMKAIDARSIDRLR 33
           D+  PE E  E   K +D  SID ++
Sbjct: 314 DDIPPETEEEEENDKKLDLDSIDMMQ 339


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 19.4 bits (38), Expect = 5.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 38  RPFTLTFRDAHLERKVRGRLRYH 60
           R +  T ++   +R+ RGR R H
Sbjct: 290 RKYRETSKERSRDRRERGRSREH 312


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 19.4 bits (38), Expect = 5.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 62  TTHNTLNTAGSSEKPSV 78
           T HN  +T  S  KPS+
Sbjct: 258 TNHNERSTPRSHAKPSL 274


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.131    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,970
Number of Sequences: 429
Number of extensions: 653
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of query: 81
length of database: 140,377
effective HSP length: 47
effective length of query: 34
effective length of database: 120,214
effective search space:  4087276
effective search space used:  4087276
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.8 bits)
S2: 37 (19.0 bits)