GeneModel BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002065-TA|BGIBMGA002065-PA|IPR009398|Adenylate
cyclase-like
         (81 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g03570.1 68417.m00492 hypothetical protein                          25   4.8  
At3g63040.1 68416.m07081 expressed protein predicted protein, C....    25   4.8  
At4g26190.1 68417.m03770 expressed protein                             25   8.3  
At1g64060.1 68414.m07256 respiratory burst oxidase protein F (Rb...    25   8.3  
At1g19230.1 68414.m02393 respiratory burst oxidase protein E (Rb...    25   8.3  

>At4g03570.1 68417.m00492 hypothetical protein 
          Length = 347

 Score = 25.4 bits (53), Expect = 4.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 10  KKPEDEVNEYLMKAIDARSIDRLRAEHCR 38
           +KP+  + EY  K ++ RSI R R   CR
Sbjct: 141 EKPDGPLVEYQAKCMNRRSIVRRRRCRCR 169


>At3g63040.1 68416.m07081 expressed protein predicted protein,
          C.elegans
          Length = 187

 Score = 25.4 bits (53), Expect = 4.8
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 10 KKPEDEVNEYLMKAIDARSIDRLRAEHCRPFTLTF 44
          K+ ED+ NE LM  I+  +  R   EH  PF   F
Sbjct: 54 KECEDKCNELLMMEIEKETSGRQEEEH-NPFCEAF 87


>At4g26190.1 68417.m03770 expressed protein
          Length = 1067

 Score = 24.6 bits (51), Expect = 8.3
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)

Query: 12   PEDEVNEYLMKAIDARSIDRLRAEHCRPFTLT 43
            PE E+ +YL +  DA ++ +  AE+  PF  T
Sbjct: 1018 PEGELRKYLERLADAENVQKFVAEN--PFGQT 1047


>At1g64060.1 68414.m07256 respiratory burst oxidase protein F
           (RbohF) (RbohAp108) / NADPH oxidase identical to
           cytochrome b245 beta chain homolog RbohAp108
           [GI:2654868], respiratory burst oxidase protein F
           [gi:3242456], from Arabidopsis thaliana
          Length = 944

 Score = 24.6 bits (51), Expect = 8.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 4   DAGADNKKPEDEVNEYLMKAIDARSIDRLRAE 35
           D   D +  E+EV E +M +  A  + RL+ +
Sbjct: 277 DKNEDGRITEEEVKEIIMLSASANKLSRLKEQ 308


>At1g19230.1 68414.m02393 respiratory burst oxidase protein E
           (RbohE) / NADPH oxidase nearly identical to respiratory
           burst oxidase protein E GI:3242787 [gi:3242787] from
           [Arabidopsis thaliana]
          Length = 926

 Score = 24.6 bits (51), Expect = 8.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 3   ADAGADNKKPEDEVNEYLMKAIDARSIDRLRAE 35
           AD+  D K   +E+ E LM +  A  + +L+ +
Sbjct: 280 ADSNEDGKITREEIKELLMLSASANKLAKLKEQ 312


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.317    0.131    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,774,973
Number of Sequences: 28952
Number of extensions: 55262
Number of successful extensions: 148
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 145
Number of HSP's gapped (non-prelim): 5
length of query: 81
length of database: 12,070,560
effective HSP length: 60
effective length of query: 21
effective length of database: 10,333,440
effective search space: 217002240
effective search space used: 217002240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)