GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002062-TA|BGIBMGA002062-PA|undefined
         (70 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    19   5.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    18   8.7  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    18   8.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    18   8.7  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 19.0 bits (37), Expect = 5.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)

Query: 3   LPIKRSFSSEG 13
           LPIKR F+S G
Sbjct: 169 LPIKRFFTSLG 179


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
          protein.
          Length = 980

 Score = 18.2 bits (35), Expect = 8.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)

Query: 24 RLSLRSRSGH 33
          R  LRSR GH
Sbjct: 60 RFRLRSRPGH 69


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 18.2 bits (35), Expect = 8.7
 Identities = 6/17 (35%), Positives = 10/17 (58%)

Query: 53  TSRYMCDHTCRVIYTII 69
           T+ ++CD  C    TI+
Sbjct: 274 TNIFLCDEICNEGQTIL 290


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 18.2 bits (35), Expect = 8.7
 Identities = 6/17 (35%), Positives = 10/17 (58%)

Query: 53  TSRYMCDHTCRVIYTII 69
           T+ ++CD  C    TI+
Sbjct: 274 TNIFLCDEICNEGQTIL 290


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.130    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,876
Number of Sequences: 317
Number of extensions: 323
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 70
length of database: 114,650
effective HSP length: 44
effective length of query: 26
effective length of database: 100,702
effective search space:  2618252
effective search space used:  2618252
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.2 bits)
S2: 35 (18.2 bits)