Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002062-TA|BGIBMGA002062-PA|undefined
(70 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23450-8|AAK31471.1| 350|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z81133-2|CAB03444.2| 95|Caenorhabditis elegans Hypothetical pr... 26 3.7
AB008096-1|BAA82661.1| 95|Caenorhabditis elegans Ceinsulin-1 p... 26 3.7
Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical p... 25 4.9
Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical p... 25 4.9
Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical p... 25 4.9
Z93782-2|CAB07854.2| 562|Caenorhabditis elegans Hypothetical pr... 25 6.5
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 25 6.5
Z71185-7|CAA94907.2| 520|Caenorhabditis elegans Hypothetical pr... 25 8.6
Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical pr... 25 8.6
Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical pr... 25 8.6
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 25 8.6
AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger p... 25 8.6
>U23450-8|AAK31471.1| 350|Caenorhabditis elegans Hypothetical
protein C30B5.7 protein.
Length = 350
Score = 26.6 bits (56), Expect = 2.1
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 37 VTQFYDKRHAA-GASIDTSRYMCDHTCRVIYTI 68
+T FY R AA G T Y C+ TC V TI
Sbjct: 189 LTSFYCGRKAAFGEGFGTFIYCCNITCNVASTI 221
>Z81133-2|CAB03444.2| 95|Caenorhabditis elegans Hypothetical
protein T28B8.2 protein.
Length = 95
Score = 25.8 bits (54), Expect = 3.7
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 13 GGATSKRDWKMRLSLRSRSGHSVEVTQFYDKRHAAGASIDTSRYMC 58
GG+T W M S+R R +V ++++KR SI + +C
Sbjct: 36 GGSTFTMAWSMSCSMRRRKR---DVGRYFEKRALIAPSIRQLQTIC 78
>AB008096-1|BAA82661.1| 95|Caenorhabditis elegans Ceinsulin-1
protein.
Length = 95
Score = 25.8 bits (54), Expect = 3.7
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 13 GGATSKRDWKMRLSLRSRSGHSVEVTQFYDKRHAAGASIDTSRYMC 58
GG+T W M S+R R +V ++++KR SI + +C
Sbjct: 36 GGSTFTMAWSMSCSMRRRKR---DVGRYFEKRALIAPSIRQLQTIC 78
>Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical
protein C36B1.12c protein.
Length = 662
Score = 25.4 bits (53), Expect = 4.9
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 3 LPIKRSFSSEGGATSKRDWKMRLSLRSRSGHSVEVTQFYDKRHAAGASI 51
+P+ +G SKR K + + R+ S +V+V K H AGAS+
Sbjct: 114 IPLDYRIKDDGTPCSKRFSKSQTAFRNASQFTVDVL----KDHRAGASL 158
>Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical
protein C36B1.12b protein.
Length = 640
Score = 25.4 bits (53), Expect = 4.9
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 3 LPIKRSFSSEGGATSKRDWKMRLSLRSRSGHSVEVTQFYDKRHAAGASI 51
+P+ +G SKR K + + R+ S +V+V K H AGAS+
Sbjct: 114 IPLDYRIKDDGTPCSKRFSKSQTAFRNASQFTVDVL----KDHRAGASL 158
>Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical
protein C36B1.12a protein.
Length = 652
Score = 25.4 bits (53), Expect = 4.9
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 3 LPIKRSFSSEGGATSKRDWKMRLSLRSRSGHSVEVTQFYDKRHAAGASI 51
+P+ +G SKR K + + R+ S +V+V K H AGAS+
Sbjct: 114 IPLDYRIKDDGTPCSKRFSKSQTAFRNASQFTVDVL----KDHRAGASL 158
>Z93782-2|CAB07854.2| 562|Caenorhabditis elegans Hypothetical
protein R12G8.2 protein.
Length = 562
Score = 25.0 bits (52), Expect = 6.5
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 3 LPIKRSFSSEGGATSKRDWKMRLSLRSRSGHSVEVTQFYDKRH 45
LP +RS S + A + ++M +S + ++Q+Y K H
Sbjct: 58 LPAQRSTSVDEVARHRVTYEMDAGKSEKSENQNPISQYYQKNH 100
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 25.0 bits (52), Expect = 6.5
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 2 SLPIKRSFSSEGGATSKRDWKMRLSLRSRSGHSVEVTQFYD 42
++P K S EG ++ DWK L S E+ +F+D
Sbjct: 115 NVPCKDIRSIEGARFTENDWKNELIRIGLSDIFPELVEFFD 155
>Z71185-7|CAA94907.2| 520|Caenorhabditis elegans Hypothetical
protein C35A5.5 protein.
Length = 520
Score = 24.6 bits (51), Expect = 8.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 20 DWKMRLSLRSRSGHSVEVTQFYDKRHAAGASID 52
D+ MRL L + S SVE + R+ AGA D
Sbjct: 238 DYWMRLKLANSSVDSVEPNLHSELRNQAGAQSD 270
>Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical
protein F58E6.1b protein.
Length = 764
Score = 24.6 bits (51), Expect = 8.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 1 MSLPIKRSFSSEGGATSKRDWKM 23
M LP+ F + A+++ DWK+
Sbjct: 491 MKLPVAEEFQHKKSASAEGDWKL 513
>Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical
protein F58E6.1a protein.
Length = 966
Score = 24.6 bits (51), Expect = 8.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 1 MSLPIKRSFSSEGGATSKRDWKM 23
M LP+ F + A+++ DWK+
Sbjct: 491 MKLPVAEEFQHKKSASAEGDWKL 513
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
protein C08B11.3 protein.
Length = 1244
Score = 24.6 bits (51), Expect = 8.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 35 VEVTQFYDKRHAAGASIDTSRYMCDHTCRVIY 66
V+ Q +KR S + + YMCD C IY
Sbjct: 924 VDDAQESEKRKCVPPSSNPTDYMCDWDCCSIY 955
>AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger
protein STAT-B protein.
Length = 810
Score = 24.6 bits (51), Expect = 8.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 1 MSLPIKRSFSSEGGATSKRDWKM 23
M LP+ F + A+++ DWK+
Sbjct: 537 MKLPVAEEFQHKKSASAEGDWKL 559
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.130 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,521,370
Number of Sequences: 27539
Number of extensions: 40413
Number of successful extensions: 106
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 98
Number of HSP's gapped (non-prelim): 14
length of query: 70
length of database: 12,573,161
effective HSP length: 50
effective length of query: 20
effective length of database: 11,196,211
effective search space: 223924220
effective search space used: 223924220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)
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