GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002061-TA|BGIBMGA002061-PA|IPR001969|Peptidase aspartic,
active site, IPR009007|Peptidase aspartic, catalytic,
IPR001995|Peptidase A2A, retrovirus, catalytic
         (197 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   5.0  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/20 (50%), Positives = 10/20 (50%)

Query: 166 TPRSETVVPVSLPQKSNSKP 185
           TPR E   P S P    SKP
Sbjct: 407 TPRPEWARPPSTPSADGSKP 426


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 106 YQHNAIVADIVDDCI 120
           YQH+ IV D+  +C+
Sbjct: 186 YQHHKIVLDMGKNCV 200


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.133    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,995
Number of Sequences: 317
Number of extensions: 1691
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 197
length of database: 114,650
effective HSP length: 54
effective length of query: 143
effective length of database: 97,532
effective search space: 13947076
effective search space used: 13947076
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)