Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002061-TA|BGIBMGA002061-PA|IPR001969|Peptidase aspartic,
active site, IPR009007|Peptidase aspartic, catalytic,
IPR001995|Peptidase A2A, retrovirus, catalytic
(197 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC56F8.08 |mud1|ucp1, ddi1|UBA domain protein Mud1|Schizosacch... 41 1e-04
SPAC212.01c |||S. pombe specific DUF999 family protein 2|Schizos... 27 1.9
SPBCPT2R1.04c |||S. pombe specific DUF999 protein family 10|Schi... 27 1.9
SPAC212.04c |||S. pombe specific DUF999 family protein 1|Schizos... 27 1.9
SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein fa... 27 1.9
SPBC1348.01 |||S. pombe specific DUF999 protein family 5|Schizos... 27 1.9
SPAC750.06c |||S. pombe specific DUF999 protein family 4|Schizos... 27 1.9
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe... 27 2.5
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 27 2.5
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 27 2.5
SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizos... 27 2.5
SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe... 25 7.5
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 25 9.9
SPAC17C9.02c |lys7||alpha-aminoadipate reductase phosphopantethe... 25 9.9
>SPAC56F8.08 |mud1|ucp1, ddi1|UBA domain protein
Mud1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 40.7 bits (91), Expect = 1e-04
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 1/119 (0%)
Query: 36 LAIKNEVNGTSCKLTLDTGASRTVTSFRIASRCFVDHTYNQVGTNLVTTTGQHISVRGEK 95
L + E+NG K +D+GA T+ S A +C + + + G +
Sbjct: 111 LFVNVEINGHKVKAFVDSGAQATILSADCAEKCGLTRLLDTRFQGVAKGVGMAKILGCVH 170
Query: 96 KVELKLGSEVYQHNAIVADIVD-DCIVGLDFMKTHSCEIDVRQGVLKCSPEEISMEGAS 153
LK+G V + D D ++GLD ++ + ID+ VL+ +EI G S
Sbjct: 171 SAPLKIGDLYLPCRFTVIEGRDVDMLLGLDMLRRYQACIDLENNVLRIHGKEIPFLGES 229
>SPAC212.01c |||S. pombe specific DUF999 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 27.1 bits (57), Expect = 1.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 125 FMKTHSCEIDVRQGVLKCSPEEISME 150
FM C +D+ QG+ C PE+++ +
Sbjct: 20 FMVEDVCNVDLEQGLDLCKPEKVNKQ 45
>SPBCPT2R1.04c |||S. pombe specific DUF999 protein family
10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 280
Score = 27.1 bits (57), Expect = 1.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 125 FMKTHSCEIDVRQGVLKCSPEEISME 150
FM C +D+ QG+ C PE+++ +
Sbjct: 20 FMVEDVCNVDLEQGLDLCKPEKVNKQ 45
>SPAC212.04c |||S. pombe specific DUF999 family protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 288
Score = 27.1 bits (57), Expect = 1.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 125 FMKTHSCEIDVRQGVLKCSPEEISME 150
FM C +D+ QG+ C PE+++ +
Sbjct: 20 FMVEDVCNVDLEQGLDLCKPEKVNKQ 45
>SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein
family 9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 27.1 bits (57), Expect = 1.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 125 FMKTHSCEIDVRQGVLKCSPEEISME 150
FM C +D+ QG+ C PE+++ +
Sbjct: 20 FMVEDVCNVDLEQGLDLCKPEKVNKQ 45
>SPBC1348.01 |||S. pombe specific DUF999 protein family
5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 27.1 bits (57), Expect = 1.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 125 FMKTHSCEIDVRQGVLKCSPEEISME 150
FM C +D+ QG+ C PE+++ +
Sbjct: 20 FMVEDVCNVDLEQGLDLCKPEKVNKQ 45
>SPAC750.06c |||S. pombe specific DUF999 protein family
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 27.1 bits (57), Expect = 1.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 125 FMKTHSCEIDVRQGVLKCSPEEISME 150
FM C +D+ QG+ C PE+++ +
Sbjct: 20 FMVEDVCNVDLEQGLDLCKPEKVNKQ 45
>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 26.6 bits (56), Expect = 2.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 74 YNQVGTNLVTTTGQHISVRGEKKVELKLGSEVYQHNAIVADIVDDCIVGLDFMK 127
YN V + TTT I ++ +YQHN + + D+ + LDFM+
Sbjct: 253 YNNVKALVWTTTPWTIPSNLALSYHPEINYGLYQHNNSIYLMSDNLVPNLDFMQ 306
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 26.6 bits (56), Expect = 2.5
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 139 VLKCSPEEISMEGASFGKVYCLKRSILTPRSETVVPVSLPQKSNSKPRCVLT 190
++KC + I+ E AS ++ L +I + E+ VP+ + + SN K C L+
Sbjct: 606 LIKCFEDMIANESASKNEIMKLVPNIQALKLESSVPLEI-RCSNCKQPCFLS 656
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 26.6 bits (56), Expect = 2.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 50 TLDTGASRTVTSFRIASRCFVDHTYNQVGTNLVTT 84
TL+ G T ASR V+H YN G +++T+
Sbjct: 988 TLEYGTCFGGTKVEDASRILVEHGYNYSGKDMLTS 1022
>SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 26.6 bits (56), Expect = 2.5
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 99 LKLGSEVYQHNAIVADIVDDCIVGLDFMKTHSCEIDVRQGVLKCSPEEISMEGASFGKVY 158
+K ++ Q + + DIVDD I FMKT C ++ SP I+ + F Y
Sbjct: 489 IKRWNQTGQKYSDLRDIVDDFIAPSTFMKTILCVTSAFMPAIR-SPSPINFLSSMFIAFY 547
Query: 159 CL 160
L
Sbjct: 548 KL 549
>SPAPB1A11.04c |||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 25.0 bits (52), Expect = 7.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 133 IDVRQGVLKCSPEEISMEGASFGKVYCL 160
I RQ +KCS E+ S + S KV C+
Sbjct: 25 IRCRQKKIKCSGEKPSCQACSNNKVECI 52
>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1405
Score = 24.6 bits (51), Expect = 9.9
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 20 SERITG-CWLAIEDGNSLAIKN 40
S R+ G CWL I+ N A+KN
Sbjct: 471 SRRVMGPCWLKIQQPNFDAVKN 492
>SPAC17C9.02c |lys7||alpha-aminoadipate reductase
phosphopantetheinyl transferase Lys7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 24.6 bits (51), Expect = 9.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 140 LKCSPEEISMEGASFGKVYC 159
L+CSP E+ + G+ YC
Sbjct: 64 LECSPNEVQISVTKAGRPYC 83
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.133 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 895,322
Number of Sequences: 5004
Number of extensions: 33938
Number of successful extensions: 78
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 66
Number of HSP's gapped (non-prelim): 14
length of query: 197
length of database: 2,362,478
effective HSP length: 69
effective length of query: 128
effective length of database: 2,017,202
effective search space: 258201856
effective search space used: 258201856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)
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