GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002061-TA|BGIBMGA002061-PA|IPR001969|Peptidase aspartic,
active site, IPR009007|Peptidase aspartic, catalytic,
IPR001995|Peptidase A2A, retrovirus, catalytic
         (197 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   0.84 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.8  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 44  GTSC----KLTLDTGASRTVTSFRIASRCFVDHTYNQVGTNLVTTTGQHISVRGEKKVEL 99
           GT C     L++  GA     +  +A RC  ++ Y Q+  +      + I    +K  +L
Sbjct: 298 GTKCVSGEHLSVSGGALNDCHAEVVARRCLCEYLYKQLELHTEDRAAESILEPAKKGFKL 357

Query: 100 KLGSEVY 106
           K G + +
Sbjct: 358 KQGIQFH 364


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 180 KSNSKPRCVLTERLDE 195
           ++NS PR +LTE   E
Sbjct: 281 RTNSDPRMILTEAYTE 296


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.133    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,745
Number of Sequences: 429
Number of extensions: 2202
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 197
length of database: 140,377
effective HSP length: 55
effective length of query: 142
effective length of database: 116,782
effective search space: 16583044
effective search space used: 16583044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)