GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002060-TA|BGIBMGA002060-PA|undefined
         (180 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   1.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   1.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.9  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 69  RANFQARNNLVSEVEEH--TRRQEERMFLIKDLRDTFAKTITEIKE 112
           +A F+A NN++  + ++  TR Q      IK L    +  +T  +E
Sbjct: 188 KARFEAINNIIDSIRQNSQTRNQAVPTGTIKTLVQMHSNLVTTSEE 233


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 69  RANFQARNNLVSEVEEH--TRRQEERMFLIKDLRDTFAKTITEIKE 112
           +A F+A NN++  + ++  TR Q      IK L    +  +T  +E
Sbjct: 188 KARFEAINNIIDSIRQNSQTRNQAVPTGTIKTLVQMHSNLVTTSEE 233


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 81  EVEEHTRRQEERMFLIKDLRDTFAKTITEIKE 112
           E  + +  ++  + L+K+LR+ F     EIK+
Sbjct: 211 EYPKGSEDKKNYVLLLKELREAFEAEAQEIKK 242


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.128    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,673
Number of Sequences: 317
Number of extensions: 743
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 180
length of database: 114,650
effective HSP length: 53
effective length of query: 127
effective length of database: 97,849
effective search space: 12426823
effective search space used: 12426823
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)