Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002060-TA|BGIBMGA002060-PA|undefined
(180 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 35 0.008
SPAC23C4.09c |||DNA-binding TFAR19-related protein|Schizosacchar... 34 0.011
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 32 0.057
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 32 0.057
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 32 0.057
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 31 0.099
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 31 0.099
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.13
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 29 0.30
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 29 0.40
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 29 0.40
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.40
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 28 0.70
SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|ch... 28 0.70
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 28 0.92
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 28 0.92
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 27 1.2
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 26 2.8
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 26 3.7
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 26 3.7
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 25 4.9
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 25 4.9
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 25 4.9
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 25 4.9
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 25 6.5
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 25 6.5
SPBC1711.14 |rec15||meiotic recombination protein Rec15|Schizosa... 25 8.6
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 8.6
SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyce... 25 8.6
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 25 8.6
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 34.7 bits (76), Expect = 0.008
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 81 EVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQ--HESRIAKAEVQVADV 138
E+EE +E I +L D K I E+K Q+++++ +S+ HE ++ +Q+ D
Sbjct: 120 EIEEVRNEKEATQVKIHELLDAKWKEIAELKTQIEKNDQALSEKNHEVMVSNQALQMKDT 179
Query: 139 RKT 141
T
Sbjct: 180 NLT 182
>SPAC23C4.09c |||DNA-binding TFAR19-related
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 131
Score = 34.3 bits (75), Expect = 0.011
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 54 PSETITSASQNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEI 110
PS + S NQ QQ + R NL+S++ EH R +R+ I +R A+ + E+
Sbjct: 24 PSNIASGPSSNQQQQEVQDEMRQNLLSQILEHPAR--DRLRRIALVRKDRAEAVEEL 78
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 31.9 bits (69), Expect = 0.057
Identities = 19/89 (21%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 54 PSETITSASQNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQ 113
P + +N+D ++ NF+A N V +V+E++ + + R + E K +
Sbjct: 709 PEQFAAEIEKNEDIRKENFEALMNSVLKVKENSIKATNNFEKMLGSR----LNVIEAKYK 764
Query: 114 VQQHEDRISQHESRIAKAEVQVADVRKTL 142
+++HE +Q +R+ + + ++ D+ L
Sbjct: 765 LEKHEMDANQVNARLTEVQDRLKDITDKL 793
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.9 bits (69), Expect = 0.057
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 61 ASQNQDQQRANFQAR-NNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHED 119
AS+N D+ A R + E+E + + I DLR+ +I ++ +
Sbjct: 486 ASKNSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDR 545
Query: 120 RISQHESRIAKAEVQVADVRKTLEDIK 146
I++ E RI EV V+++ T+++ +
Sbjct: 546 LINELEQRIKSYEVNVSELNGTIDEYR 572
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 31.9 bits (69), Expect = 0.057
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 81 EVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRIAK 130
++EE ++ EE I+ L +TF + +T + + E++I Q +SR+ K
Sbjct: 357 DLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEKIIQEKSRVDK 406
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.1 bits (67), Expect = 0.099
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 73 QARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRIAKAE 132
Q + L+ E+EE +R++ER +K +R+ K + + ++ + E+R + R+A+
Sbjct: 567 QRQAKLLEEIEEENKRKQERE--LKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQA 624
Query: 133 VQVADVRKTLEDIK 146
Q A K E+ +
Sbjct: 625 AQKALEAKRQEEAR 638
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 31.1 bits (67), Expect = 0.099
Identities = 15/64 (23%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 69 RANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRI 128
++ ++R NL+ +++ + +E ++ L+K+ RD+ +K QV+ + IS+ E +
Sbjct: 323 KSKMESRTNLMKQLQVNIEEKESQLQLLKEKRDS-------LKYQVENQDISISEFEKMV 375
Query: 129 AKAE 132
++ E
Sbjct: 376 SERE 379
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.7 bits (66), Expect = 0.13
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 63 QNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRIS 122
Q QDQ NL+S+ E+ E+++ +IKDL+D A + ++ E +++ S
Sbjct: 127 QAQDQNLKQTAQLQNLLSDKEKEV---EKKITIIKDLKDALASSTHQVLELQHTQQEKAS 183
Score = 24.6 bits (51), Expect = 8.6
Identities = 13/65 (20%), Positives = 33/65 (50%)
Query: 67 QQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHES 126
Q + + LV +++ + ++ + L + +R+ TE+KE+++ E+R +S
Sbjct: 868 QNSFDLREHQTLVLQLQSNITELKQDITLQRTVRNQLEIQTTELKERLKFMEERQENLQS 927
Query: 127 RIAKA 131
++ A
Sbjct: 928 KLIAA 932
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 29.5 bits (63), Expect = 0.30
Identities = 15/71 (21%), Positives = 35/71 (49%)
Query: 55 SETITSASQNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQV 114
S + S S+ + ++ +FQ ++ V + T + ++ K++ D F + T+ Q+
Sbjct: 20 SSPVQSVSEMKSIKQKSFQYFDDYEKNVSDKTIQFQKLQMTAKEIIDAFERDSTQRTLQI 79
Query: 115 QQHEDRISQHE 125
+ E +I + E
Sbjct: 80 ESLESKIGEQE 90
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 29.1 bits (62), Expect = 0.40
Identities = 10/45 (22%), Positives = 27/45 (60%)
Query: 101 DTFAKTITEIKEQVQQHEDRISQHESRIAKAEVQVADVRKTLEDI 145
DT ++I +K ++Q + +H+SR+ + E + D+ +++++
Sbjct: 984 DTTTESIATLKTELQSLNKYVDEHKSRLREFENALWDINSSIDEL 1028
Score = 26.6 bits (56), Expect = 2.1
Identities = 15/89 (16%), Positives = 39/89 (43%)
Query: 55 SETITSASQNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQV 114
+E + S + + + + + E+ T + EE++ + + K+I + +
Sbjct: 404 NEEVKSLREKAAKVKNDCTSEKKTRQSYEQQTVKIEEQLKFLLNKEKKLKKSIEALSFEK 463
Query: 115 QQHEDRISQHESRIAKAEVQVADVRKTLE 143
+ E+ +S H+ K ++AD+ L+
Sbjct: 464 SEAENSLSSHDIDSQKLNSEIADLSLRLQ 492
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 29.1 bits (62), Expect = 0.40
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 76 NNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRI 128
+++ EV + +EER + L A+ T ++VQ+ EDR+ Q E+ +
Sbjct: 374 HSVFREVNPSAKLEEERALHEEKLMKMEAEMKTIFSQKVQEKEDRLKQSENEL 426
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.1 bits (62), Expect = 0.40
Identities = 11/42 (26%), Positives = 27/42 (64%)
Query: 105 KTITEIKEQVQQHEDRISQHESRIAKAEVQVADVRKTLEDIK 146
+TI +++ Q+ + +D + +S +++ E + A +R LED++
Sbjct: 2001 RTIRQLEAQISKFDDDKKRIQSSVSRLEERNAQLRNQLEDVQ 2042
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 28.3 bits (60), Expect = 0.70
Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 75 RNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRIAKAEVQ 134
R NL+ + E + E IK +D + + + E+K++++ + + HE +A+
Sbjct: 96 RANLLKQSEANNAALESLNNSIKQKQDEYQRKLEELKKEIEYAKTKSLFHE---REAQDA 152
Query: 135 VADVRKTLEDIK 146
+ ++K D+K
Sbjct: 153 IETMKKMKRDVK 164
>SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 401
Score = 28.3 bits (60), Expect = 0.70
Identities = 22/107 (20%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 44 AQDAPRLRIRPSETITSASQNQDQQRANFQARN-NLVSE---VEEHTRRQEERMFLIKDL 99
A++A +L + T+T+ ++ Q + + +N +LV E + +++ E R ++
Sbjct: 121 AEEALKLSNEETVTLTAQVESLTQDITDLRQQNASLVEENQLLSTQSKQWERRARDEHEM 180
Query: 100 RDTFAKTITEIKEQVQQHEDRISQHESRIAKAEVQVADVRKTLEDIK 146
+++ A + + +EQ+ + +R Q+E I + + LE K
Sbjct: 181 QESLAVRLADCEEQLARETERQEQYEVEIQRHLTNQHQLEIELESTK 227
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 27.9 bits (59), Expect = 0.92
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 55 SETITSASQNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQV 114
S TS + D + +R N S+ E + E L K+ TI ++K+ +
Sbjct: 15 SNVETSIDKVLDGNQIEEMSRGNAKSKDEIIAKLLTEGQALSKN-ELKLNNTIKQLKKSL 73
Query: 115 QQHEDRISQHESRIAKAEVQVADVRKTLEDIK 146
+ E ++ + + + A E+QV+D ++ E ++
Sbjct: 74 SEAETKLKRLDEKQATPELQVSDSKEMEEQLE 105
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 27.9 bits (59), Expect = 0.92
Identities = 19/100 (19%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 45 QDAPRLRIRPSETITSASQNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFA 104
Q +++ ITS SQ +D+ + Q + +E + +E+ +K+
Sbjct: 432 QSRTQMQTELDSYITSNSQLKDEITSLKQTVSESEAERKRLFSSAQEKQLQMKET----V 487
Query: 105 KTITEIKEQVQQHEDRISQHESRIAKAEVQVADVRKTLED 144
+T ++EQ + + ++ + E + E ++ ++RK L +
Sbjct: 488 NKLTSLQEQNNEFDRQLKEQEEDLQNKEEELTELRKLLRE 527
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 27.5 bits (58), Expect = 1.2
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 77 NLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRIAKAE---V 133
N SE H R+ E+ L K K I+ +KE++++ ++RI ++I+ E
Sbjct: 26 NTASEYIAHESREIEKKRLQK-----VRKEISSVKEKIRRLDERIDSRLTKISVKENFRK 80
Query: 134 QVADVRKTLEDIK 146
Q++ R TL+ ++
Sbjct: 81 QLSKFRDTLQSLQ 93
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 26.2 bits (55), Expect = 2.8
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 79 VSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRI 128
V E E+ R ER+F +++ D + E+KEQV + E ISQ E I
Sbjct: 706 VQEAEDALER--ERLF--REINDLQIQN-AEMKEQVYEKESTISQKEVEI 750
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 25.8 bits (54), Expect = 3.7
Identities = 15/87 (17%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 57 TITSASQNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQ 116
+ S ++ D + + Q++ + E+E + ++ K +R+T+ K I ++K ++++
Sbjct: 28 SFASKARGNDYESSMIQSQ---IQEIEAFRKTVDDMYEKQKSIRETYEKDINKLKRELEE 84
Query: 117 --HEDRISQHESRIAKAEVQVADVRKT 141
E + + +R ++E+ ++ + T
Sbjct: 85 LGVEANTASYRNRGERSELAASNNQVT 111
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.8 bits (54), Expect = 3.7
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 69 RANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRI 128
+ N + + L + E +++++ DLR T + K+ ++ + HES I
Sbjct: 644 KTNLEEQTQLAEKYHEELLDNQQKLY---DLRIELDYTKSNCKQMEEEMQVLREGHESEI 700
Query: 129 AKAEVQVADVRKTLEDIK 146
+ + + K L+DIK
Sbjct: 701 KDFIEEHSKLTKQLDDIK 718
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.4 bits (53), Expect = 4.9
Identities = 16/74 (21%), Positives = 31/74 (41%)
Query: 55 SETITSASQNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQV 114
+ +I +S + ++ N SE + + EE+ T KT+ E+ EQ+
Sbjct: 177 NSSIGKSSADLSSDSSSDSESNTSFSETDVEEEKAEEKSDAESMAPSTPPKTVNELPEQI 236
Query: 115 QQHEDRISQHESRI 128
+ + + Q S I
Sbjct: 237 YEKPEIVLQPNSLI 250
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 25.4 bits (53), Expect = 4.9
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 99 LRDTFAKTITEIKEQ--VQQHEDRISQHESRIAKAEVQVADVRKTLEDIK 146
+ D ++ +E Q V QHE++I E +++ + +++DV L++IK
Sbjct: 746 IEDMIKRSFSENVNQTLVPQHEEKIKSFEEKLSALKKEMSDV--DLKEIK 793
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 25.4 bits (53), Expect = 4.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 97 KDLRDTFAKTITEIKEQVQQHEDRISQHESRIAKAEVQVADVRKTL 142
K+ ++TF + T I Q+ +RI + S K ++ V D K L
Sbjct: 45 KNRKETFKRAETFINNYRQRERERIRLNRSAKNKGDIFVPDETKLL 90
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.4 bits (53), Expect = 4.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 95 LIKDLRDTFAKTITEIKEQVQQHEDRISQHESRIAKAE 132
+IK RD F + + QV D+I+ ES++ + E
Sbjct: 486 VIKQQRDRFRRANVTLVNQVSAANDKIALLESKLEEVE 523
Score = 25.0 bits (52), Expect = 6.5
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 77 NLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRIAKAEVQVA 136
+L S++ + ++ E + ++ IT+ ++ E + S+ E I K E +A
Sbjct: 369 SLESQLLKREKQLSEELAKLRSTNAQLTDRITQESKKASFLEQKASEQEEVIRKLEKDLA 428
Query: 137 DV 138
DV
Sbjct: 429 DV 430
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 25.0 bits (52), Expect = 6.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 109 EIKEQVQQHEDRISQHESRIAKAEVQVADVRKTLE 143
+++ +Q+ E+RI ES +AK E+ D LE
Sbjct: 33 KLRSNIQKIEERIENVESSLAKTEILHEDNPGLLE 67
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 25.0 bits (52), Expect = 6.5
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 103 FAKTITEIKEQVQQHEDRISQ 123
+ K I E++EQ+ + E+R++Q
Sbjct: 408 YVKAIVELREQISELENRLAQ 428
>SPBC1711.14 |rec15||meiotic recombination protein
Rec15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 180
Score = 24.6 bits (51), Expect = 8.6
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 55 SETITSASQNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDT--FAKTITEIKE 112
+E + ++Q Q A+ A N EV T Q R +++ +++ +I
Sbjct: 19 AEDMQQHQKSQSNQIASCLAEMNTKQEVVNQTIGQLGRSISEVQQQNSQLVLQSLNQINM 78
Query: 113 QVQQHEDRISQHESRIAKAEVQVADVRKTLEDIK 146
+QQ I + SRI K E ++D+ E ++
Sbjct: 79 SMQQVALGIQDYASRINKLEQTMSDMNLKFEALQ 112
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 24.6 bits (51), Expect = 8.6
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 66 DQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHE 125
D +++ + +N VS+ + R+ L K LR+ K ++ E++Q E ++
Sbjct: 56 DSNKSDSKLLSNQVSQNDNDARKN-----LRKRLRNDVLK---DLAEEIQGCEKKLESLY 107
Query: 126 SRIAKAEVQVADVRKTLED 144
+AKA+ + + + LE+
Sbjct: 108 EEVAKAKAKAVEDQLALEE 126
>SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 24.6 bits (51), Expect = 8.6
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 99 LRDTFAKTITEIKEQVQQHEDRISQHESRI--AKAEVQVAD 137
L D FA+ + EI QVQ+ E S + +I K E++ D
Sbjct: 140 LDDDFARRLEEIDRQVQEFEKSSSDMDVQIHTHKREIEEDD 180
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 24.6 bits (51), Expect = 8.6
Identities = 14/70 (20%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 75 RNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRIAKAEVQ 134
R N ++EE ++ L+ + D + E++E++ E+RI Q + ++ +
Sbjct: 149 RQNHQQQLEEVLATVDQLQSLVTNFNDQ-QDEVDELRERITLKEERIQQMRNEASQRRFE 207
Query: 135 VADVRKTLED 144
+ LE+
Sbjct: 208 FKTTIECLEE 217
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.128 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,325
Number of Sequences: 5004
Number of extensions: 15301
Number of successful extensions: 102
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 76
Number of HSP's gapped (non-prelim): 39
length of query: 180
length of database: 2,362,478
effective HSP length: 69
effective length of query: 111
effective length of database: 2,017,202
effective search space: 223909422
effective search space used: 223909422
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)
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