Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002060-TA|BGIBMGA002060-PA|undefined
(180 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 32 0.009
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 26 0.59
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 26 0.78
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 25 1.0
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 25 1.8
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 24 2.4
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 24 2.4
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 24 2.4
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 24 2.4
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 24 3.1
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 24 3.1
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 24 3.1
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 23 5.5
DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 23 7.2
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 7.2
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 7.2
AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 23 7.2
AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 23 7.2
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 23 7.2
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 32.3 bits (70), Expect = 0.009
Identities = 16/73 (21%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 65 QDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQH 124
++ Q+ A+ V ++EE ++R+ + D +T +K+Q++QH+++++
Sbjct: 825 EELQKGIVTAKEQAV-KLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNS- 882
Query: 125 ESRIAKAEVQVAD 137
+S+ KA+ D
Sbjct: 883 QSKELKAKYHQRD 895
Score = 24.2 bits (50), Expect = 2.4
Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 76 NNLVSEVEEHTRRQ-EERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRIAKAE-V 133
NNL + + + +Q +E + + +T KTI E +E Q ++ +++IA +
Sbjct: 725 NNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQAKIADGKGH 784
Query: 134 QVADVRKTLEDIK 146
+ +++ ED+K
Sbjct: 785 RERELKSAEEDLK 797
Score = 23.4 bits (48), Expect = 4.1
Identities = 17/81 (20%), Positives = 33/81 (40%)
Query: 64 NQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQ 123
N +QR + E+EE ++ E I + R+T + ++K+ + D
Sbjct: 725 NNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQAKIADGKGH 784
Query: 124 HESRIAKAEVQVADVRKTLED 144
E + AE + +K E+
Sbjct: 785 RERELKSAEEDLKRSKKKSEE 805
Score = 22.2 bits (45), Expect = 9.5
Identities = 16/96 (16%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 56 ETITSASQNQDQQRANFQAR-----NNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEI 110
E+ + +Q +Q+ Q R ++ E+E+ + ++ + R+T +I +
Sbjct: 268 ESNCATAQTLEQEAKELQERIDTEGGGVLGELEQQLAVESKKEATVAAERNTMKDSIGQE 327
Query: 111 KEQVQQHEDRISQHESRIAKAEVQVADVRKTLEDIK 146
+ +++ + I E +A EV++ ++ + +K
Sbjct: 328 QRKLKNLQKSIRDDEQALAGKEVEMQRRGESFQALK 363
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 26.2 bits (55), Expect = 0.59
Identities = 10/53 (18%), Positives = 27/53 (50%)
Query: 79 VSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRIAKA 131
+ ++EE +E+ F + + + + E KE+ ++ E+++ ++A A
Sbjct: 100 IQQLEEQNLEMKEQNFRLAEQITRMCQLLQEEKEEAKRREEKLKAQMEKLAAA 152
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 25.8 bits (54), Expect = 0.78
Identities = 16/78 (20%), Positives = 37/78 (47%)
Query: 69 RANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRI 128
+AN +A N + E +E+R+ ++D+ K I E + +++ + ++ E+++
Sbjct: 389 QANMRATNERRKKTLEQIAAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQKTEVEAKL 448
Query: 129 AKAEVQVADVRKTLEDIK 146
+ D K L + K
Sbjct: 449 TANLATLKDETKVLLEEK 466
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 25.4 bits (53), Expect = 1.0
Identities = 12/61 (19%), Positives = 29/61 (47%)
Query: 63 QNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRIS 122
Q Q QQ+ N Q + ++H +R++++ ++ + + ++Q QQ + +
Sbjct: 247 QQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQ 306
Query: 123 Q 123
Q
Sbjct: 307 Q 307
Score = 24.6 bits (51), Expect = 1.8
Identities = 12/64 (18%), Positives = 32/64 (50%)
Query: 63 QNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRIS 122
+ Q QQR Q + + + ++ +RQ+++ ++L T + ++Q Q ++ +
Sbjct: 273 EQQQQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQQQQSNQPQQQ 332
Query: 123 QHES 126
Q ++
Sbjct: 333 QQQT 336
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 24.6 bits (51), Expect = 1.8
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 13/78 (16%)
Query: 68 QRANF--QARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHE 125
Q+AN+ Q ++VEE +RR EE + L+ + I+ Q+ D + + E
Sbjct: 1375 QKANYTYQTLAGFKNQVEESSRRAEEALNLVPN-----------IERQIVNSRDLLQRAE 1423
Query: 126 SRIAKAEVQVADVRKTLE 143
+ A D RK +
Sbjct: 1424 EALYAASRNAEDARKNAQ 1441
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 24.2 bits (50), Expect = 2.4
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 68 QRANF--QARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRI 121
Q+AN+ Q ++VEE +RR EE + L+ ++ + I ++ +Q+ E+ +
Sbjct: 236 QKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIE----RQIVNSRDLLQRAEEAL 287
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 24.2 bits (50), Expect = 2.4
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 68 QRANF--QARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRI 121
Q+AN+ Q ++VEE +RR EE + L+ ++ + I ++ +Q+ E+ +
Sbjct: 236 QKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIE----RQIVNSRDLLQRAEEAL 287
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 24.2 bits (50), Expect = 2.4
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 68 QRANF--QARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRI 121
Q+AN+ Q ++VEE +RR EE + L+ ++ + I ++ +Q+ E+ +
Sbjct: 236 QKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIE----RQIVNSRDLLQRAEEAL 287
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 24.2 bits (50), Expect = 2.4
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 68 QRANF--QARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRI 121
Q+AN+ Q ++VEE +RR EE + L+ ++ + I ++ +Q+ E+ +
Sbjct: 236 QKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIE----RQIVNSRDLLQRAEEAL 287
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 23.8 bits (49), Expect = 3.1
Identities = 12/60 (20%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 83 EEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQQHEDRISQHESRIAKAEVQVADVRKTL 142
E++ +E+ L++ + + + E KE+ ++ E+++ ++A A + DV +L
Sbjct: 129 EQNCAMKEQNAKLLEQITG-MCQLLQEEKEEAKRREEKLEAQMEKLAAAHQRDRDVLNSL 187
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 23.8 bits (49), Expect = 3.1
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 46 DAPRLRIRPSETI-TSASQNQDQQRANFQARNNLVSEVEEHTRRQEE 91
D+ R R S T+A+Q++ +QR + + V EE+ QEE
Sbjct: 127 DSGRKSFRKSTAAKTAATQSRLKQRFEAERKRTRVIRTEEYIPTQEE 173
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 23.8 bits (49), Expect = 3.1
Identities = 15/78 (19%), Positives = 34/78 (43%)
Query: 48 PRLRIRPSETITSASQNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTI 107
P+LR + + Q Q QQ+ Q R + + ++Q+++ + R +
Sbjct: 300 PQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQ 359
Query: 108 TEIKEQVQQHEDRISQHE 125
+ ++Q QQ + + Q +
Sbjct: 360 QQHQQQQQQWQQQQQQQQ 377
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 23.0 bits (47), Expect = 5.5
Identities = 14/75 (18%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 56 ETITSASQNQDQQRANFQARNNLVSEVEEHTRRQEERMFLIKDLRDTFAKTITEIKEQVQ 115
+ I+ ++ QD + + + L +++EHT E+ I + F + + + K+ Q
Sbjct: 408 DKISHQNKLQDDLKKDIAKQGELEKKIQEHTESFEQLRVQIDEHNKNFYE-LKKKKDHYQ 466
Query: 116 QHEDRISQHESRIAK 130
+ I + E+ + +
Sbjct: 467 SLRNDIWKKETAVTQ 481
>DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific
doublesex protein protein.
Length = 265
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 47 APRLRIRPSETITSASQNQDQQRA 70
A R R+ +T +Q QD+QRA
Sbjct: 74 AERQRVMALQTALRRAQTQDEQRA 97
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 47 APRLRIRPSETITSASQNQDQQRA 70
A R R+ +T +Q QD+QRA
Sbjct: 74 AERQRVMALQTALRRAQTQDEQRA 97
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 22.6 bits (46), Expect = 7.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 57 TITSASQNQDQQRANFQARNNLVSEVEEHTR 87
T+ S S N D + Q +N LVS H R
Sbjct: 838 TLMSYSSNNDYIGSLVQVKNALVSSDHHHGR 868
>AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific
doublesex protein protein.
Length = 241
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 47 APRLRIRPSETITSASQNQDQQRA 70
A R R+ +T +Q QD+QRA
Sbjct: 74 AERQRVMALQTALRRAQTQDEQRA 97
>AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific
doublesex protein protein.
Length = 283
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 47 APRLRIRPSETITSASQNQDQQRA 70
A R R+ +T +Q QD+QRA
Sbjct: 74 AERQRVMALQTALRRAQTQDEQRA 97
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 22.6 bits (46), Expect = 7.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 47 APRLRIRPSETITSAS 62
AP L +RP E++TS S
Sbjct: 139 APYLAVRPVESLTSGS 154
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.316 0.128 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,878
Number of Sequences: 2123
Number of extensions: 3654
Number of successful extensions: 29
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 25
length of query: 180
length of database: 516,269
effective HSP length: 60
effective length of query: 120
effective length of database: 388,889
effective search space: 46666680
effective search space used: 46666680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)
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