Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002059-TA|BGIBMGA002059-PA|undefined
(184 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 34 0.015
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 33 0.025
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 33 0.034
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 31 0.10
SPAC1486.09 |||ribosome biogenesis protein Nob1 |Schizosaccharom... 29 0.31
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.31
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 29 0.41
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 29 0.41
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.55
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 29 0.55
SPBC244.01c |sid4||SIN component scaffold protein Sid4 |Schizosa... 29 0.55
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 28 0.95
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 28 0.95
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 1.3
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 1.3
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 27 1.7
SPAC1486.02c |ucp14||UBA domain protein Ucp14|Schizosaccharomyce... 27 2.2
SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schiz... 27 2.2
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 27 2.2
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 27 2.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 2.2
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 2.2
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 27 2.2
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 27 2.2
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 2.9
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 26 3.9
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 26 3.9
SPAC3A12.13c |||translation initiation factor eIF3 complex subun... 26 3.9
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 26 3.9
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 26 3.9
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 25 5.1
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 25 5.1
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 25 5.1
SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces pomb... 25 5.1
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 25 5.1
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 25 6.7
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 25 6.7
SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4 |Schizosac... 25 6.7
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 25 6.7
SPCC188.02 |par1||protein phosphatase regulatory subunit Par1 |S... 25 6.7
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 25 6.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.7
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 25 6.7
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 25 8.9
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 25 8.9
SPAC24B11.07c |||ketopantoate reductase |Schizosaccharomyces pom... 25 8.9
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 25 8.9
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 8.9
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 25 8.9
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 25 8.9
SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit |... 25 8.9
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 25 8.9
SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces ... 25 8.9
SPAC22E12.07 |rna1||Ran GAP Rna1|Schizosaccharomyces pombe|chr 1... 25 8.9
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 25 8.9
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 25 8.9
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 25 8.9
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 25 8.9
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 33.9 bits (74), Expect = 0.015
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 54 SSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRNDEGPK 113
S S +++ AD++ + E S +D E + ++DE DEA+++A S +DE PK
Sbjct: 326 SGSSNQSINADSSAGS-EGVDEGTSTEAND-ESSEDDDEDNNTDEANEDAQSNVSDESPK 383
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 33.1 bits (72), Expect = 0.025
Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 1/132 (0%)
Query: 31 PPNNSDSDRVVVGVLTMPLKKSQSSSKTETMEADTTGITLETTS-NENSQNTDDQEQAGE 89
PP + S G + + SSS++E+ D + + S +E+S D +
Sbjct: 92 PPEKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSS 151
Query: 90 NDESGQNDEASQNADSPRNDEGPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPEHDDS 149
+ ES + E S ++ S + E +S +S
Sbjct: 152 DSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESES 211
Query: 150 QPEDLAIETSES 161
E +S S
Sbjct: 212 SSEGSDSSSSSS 223
Score = 31.1 bits (67), Expect = 0.10
Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 5/164 (3%)
Query: 2 SENQEEPCTSSSNPAXXXXXXXXXXXXXRPPNNSDSDRVVVGVLTMPLKKSQSSSKTETM 61
SE+ E SSS+ + ++S S S S++ +
Sbjct: 137 SESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSE 196
Query: 62 EADTTGITLETTSNENSQNTDDQEQAGENDE---SGQNDEASQNADSPRNDEGPKXXXXX 118
++D++ + ++ S +S+ +D + ++ S ND +S ++DS E
Sbjct: 197 DSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDS--ESESSSEDSDS 254
Query: 119 XXXXXXXXXXXXXXXXXXXXXXXASPEHDDSQPEDLAIETSESD 162
S + S D E+S D
Sbjct: 255 SSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSED 298
Score = 30.3 bits (65), Expect = 0.18
Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 3/164 (1%)
Query: 2 SENQEEPCTSSSNPAXXXXXXXXXXXXXRPPNNSDSDRVVVGVLTMPLKKSQSSSKTETM 61
S + + SSS + +N S + S SSS +
Sbjct: 202 SSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDS 261
Query: 62 EADTTGITLETTSNENSQNTDDQEQAGEND---ESGQNDEASQNADSPRNDEGPKXXXXX 118
E++++ +++SN + D + +++ S +D S ++DS +
Sbjct: 262 ESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNT 321
Query: 119 XXXXXXXXXXXXXXXXXXXXXXXASPEHDDSQPEDLAIETSESD 162
+ + D S+ D +++ D
Sbjct: 322 DTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHDKSLKRKHED 365
Score = 25.4 bits (53), Expect = 5.1
Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 2/92 (2%)
Query: 71 ETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRNDEGPKXXXXXXXXXXXXXXXXX 130
E + + +S + D + S ND +S ++DS E
Sbjct: 101 EASGSGSSSDESDSSSSESESSSEDNDSSSSSSDS--ESESSSEDSDSSSSSSDSESESS 158
Query: 131 XXXXXXXXXXXASPEHDDSQPEDLAIETSESD 162
+S S+ D + +S+S+
Sbjct: 159 SEGSDSSSSSSSSESESSSEDNDSSSSSSDSE 190
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 32.7 bits (71), Expect = 0.034
Identities = 23/114 (20%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 2 SENQEEPCTSSSNPAXXXXXXXXXXXXXRPPNNSDSDRVVVGVLTMPLKKS--QSSSKTE 59
SE++ S S+ + ++S+S+ V+ V T K+S +SSS +E
Sbjct: 87 SESESSSSESESSSSESESSSSESESSSSESSSSESEEEVI-VKTEEKKESSSESSSSSE 145
Query: 60 TMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRNDEGPK 113
+ E + + +E E+S ++ + + E++ + E+ + + E K
Sbjct: 146 SEEEEEAVVKIE-EKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKK 198
Score = 30.7 bits (66), Expect = 0.14
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 51 KSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQN-ADSPRND 109
+S+SSS E + T E + ++D + + + ESG +D +S + ++S D
Sbjct: 176 ESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSED 235
Query: 110 E 110
E
Sbjct: 236 E 236
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 31.1 bits (67), Expect = 0.10
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 50 KKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSP 106
K +SSS +E+ E D E E ++ D+ G++++ +NDE SP
Sbjct: 233 KDDESSSGSESYERD------EDVDEEEEEDDDENNDEGDDEDENENDELRSENGSP 283
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 72 TTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRNDE 110
++ +E+ + +D ++ E D+ NDE + D NDE
Sbjct: 238 SSGSESYERDEDVDEEEEEDDDENNDE-GDDEDENENDE 275
>SPAC1486.09 |||ribosome biogenesis protein Nob1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 388
Score = 29.5 bits (63), Expect = 0.31
Identities = 15/72 (20%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 30 RPPNNSDSDRVVVGVLTMPLKKSQSSSKTETMEADTTGITLETTSNENSQ----NTDDQE 85
+PP+NS+S + + + ++ A+ + ETT + N++ NT++ +
Sbjct: 118 KPPSNSNSTEDASKPTSSDTASVKETENSDPKSAENEVLEGETTQHSNNKEAHPNTEENK 177
Query: 86 QAGENDESGQND 97
+ +N+E ++D
Sbjct: 178 EQEDNEEDDEDD 189
Score = 28.7 bits (61), Expect = 0.55
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 50 KKSQSSSKTETMEADTTGITLETTSNENS--QNTDDQEQAGENDESGQNDEASQNADSPR 107
K +S+ TE T+ T ENS ++ +++ GE + N EA N + +
Sbjct: 118 KPPSNSNSTEDASKPTSSDTASVKETENSDPKSAENEVLEGETTQHSNNKEAHPNTEENK 177
Query: 108 NDE 110
E
Sbjct: 178 EQE 180
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 29.5 bits (63), Expect = 0.31
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 51 KSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADS 105
KS ++SKT T G+ ++N+ + TDD + S + AS ++ S
Sbjct: 267 KSLTTSKTTASGHITKGVMEALSTNDTTNTTDDATNTTSDSSSSSSASASSSSSS 321
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 29.1 bits (62), Expect = 0.41
Identities = 13/61 (21%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 50 KKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRND 109
KK ++++ + + E+D+ + + + ++D++ AG + + +NDE ND
Sbjct: 38 KKKKNTTSSGSSESDSMSQN-DKKKDSSLNESEDEDFAGFGESASENDELESAESEAEND 96
Query: 110 E 110
E
Sbjct: 97 E 97
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 29.1 bits (62), Expect = 0.41
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 47 MPLKKSQSSSKTETM-EADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNAD 104
+P + + S+ +T+ E+ TT I+ ++ +ENS +DD + ++S ND S D
Sbjct: 350 VPSENDTTESENDTLSESSTTSIS--SSPSENSDTSDDLTKVDSPNKSLVNDNVSAKHD 406
Score = 27.1 bits (57), Expect = 1.7
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 46 TMPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADS 105
T+ + SKT + E +T +T + + + ++ G +DES +++E+ ++D
Sbjct: 501 TLSYSRLSELSKTFSPEIREPSLTKKT-----AVSMQESKEEGRSDESSESEESGSSSDE 555
Query: 106 PRNDE 110
N E
Sbjct: 556 SDNSE 560
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.7 bits (61), Expect = 0.55
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 56 SKTETMEADTTGITLETTSNENSQNTDDQEQAGENDE 92
S+ +E+D G+T ++ +EN +N+D +E+ + DE
Sbjct: 3951 SEARELESDMNGVTKDSVVSEN-ENSDSEEENQDLDE 3986
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 47 MPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSP 106
+P + +S + E+ +G+ E +N +++ D +E A E D + Q+D A
Sbjct: 3897 LPQEGKSNSGELESGTGLGSGVGAEDITNTLNEDDDLEELANEEDTANQSDLDESEAREL 3956
Query: 107 RND 109
+D
Sbjct: 3957 ESD 3959
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 28.7 bits (61), Expect = 0.55
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 75 NENSQNTDDQEQAGENDESGQNDEASQNADS 105
NEN +N +D E G +E D+ S +ADS
Sbjct: 1851 NENDENYEDSEDDGVYEEMEFEDDQSGSADS 1881
>SPBC244.01c |sid4||SIN component scaffold protein Sid4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 28.7 bits (61), Expect = 0.55
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 33 NNSDSDRVVVGVLTMPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDE 92
N+ +V GV + +K +++ K + D+T + LE N+ D + Q G+N +
Sbjct: 59 NDEQISELVNGVNSTTIK--ENTKKEISNPNDSTRLPLEQIPGSNNLFLDPRHQLGDNSQ 116
Query: 93 SGQ-NDEASQNAD 104
+ Q + E S N++
Sbjct: 117 NAQRHHEPSFNSE 129
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 27.9 bits (59), Expect = 0.95
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 74 SNENSQNTDDQEQAGENDESGQN---DEASQNADSPRNDE 110
+ E Q+ DD EQ EN+++ QN + S+ D+ DE
Sbjct: 33 AEELPQDEDDYEQEEENEDADQNTSVESESEELDNENEDE 72
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 27.9 bits (59), Expect = 0.95
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 34 NSDSDRVVVGVLTMPLKKSQSSSKTETMEADTTGITLETTSNENSQNT 81
N+D D ++ P+++ SS+T ++ +T ++TT+N N+
Sbjct: 529 NTDKDNYLIKSKKEPIQQKSVSSETTLVKPSSTSSYIDTTNNVLKTNS 576
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 50 KKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEAS 100
+ S+ +TE+ E E+ S S++ ++ E E+DES ++ +S
Sbjct: 86 ESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDESERSGPSS 136
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.5 bits (58), Expect = 1.3
Identities = 17/119 (14%), Positives = 34/119 (28%)
Query: 43 GVLTMPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQN 102
GVL + S SS T + + + + TT+ S ++ + + S + +S +
Sbjct: 121 GVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSS 180
Query: 103 ADSPRNDEGPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPEHDDSQPEDLAIETSES 161
+ S + +S S +S S
Sbjct: 181 SSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSS 239
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 27.1 bits (57), Expect = 1.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 55 SSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRN 108
+ + E E++T T+ N+ + D+E E+D S ND S+ DS N
Sbjct: 146 NDQPEKNESNTAS-TIRPPWIGNNDHATDKENLLESDASSSNDSESELTDSADN 198
>SPAC1486.02c |ucp14||UBA domain protein Ucp14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 372
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 51 KSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADS 105
++ S+ ET+ A TG+ E T NEN + + QN A+ A S
Sbjct: 224 QNASTFNPETLFALPTGLDAERTENENQVENPVSNADANDSPTRQNARATAIASS 278
>SPCC1919.03c |||AMP-activated protein kinase beta subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 298
Score = 26.6 bits (56), Expect = 2.2
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 75 NENSQNTDDQEQAGENDESGQNDEASQNADSPRNDE 110
N+ + +DD +Q G N+ + QN + + + R +
Sbjct: 49 NQEGEMSDDNQQEGGNNRTSQNGTSGSSGHTKRRSQ 84
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 26.6 bits (56), Expect = 2.2
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 45 LTMPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNAD 104
+ P+K QS + E + + + E S +N Q D+++Q+ E D + +N+ A++ D
Sbjct: 217 VVQPIKAIQSGNDEEEIFSWGDERSDEEES-DNEQVNDEKKQSSEEDTT-ENNSAAEVID 274
Query: 105 SPRND 109
ND
Sbjct: 275 ETVND 279
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 55 SSKTETMEADTTGITLET----TSNENSQNTDDQEQAGENDESGQNDEASQNADSPRNDE 110
+SK E+ D + + E SN+ S N DD + E +++ S N D+ DE
Sbjct: 79 NSKKESTNLDDSNMLEEPKHHDNSNKESTNLDDLNMSEEPKHHDSSNKESTNLDNSNMDE 138
Score = 24.6 bits (51), Expect = 8.9
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 51 KSQSSSKTETMEADTTGITLETTSNENSQ----NTDDQEQAGENDESGQNDEASQNADSP 106
K +S E+ D + E ++NS+ N DD E +++ S N D
Sbjct: 53 KYHDNSNKESTNLDDLNMLEEPEHHDNSKKESTNLDDSNMLEEPKHHDNSNKESTNLDDL 112
Query: 107 RNDEGPK 113
E PK
Sbjct: 113 NMSEEPK 119
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 41 VVGVLTMPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQ-AGENDESGQNDEA 99
++G T+ K + SK + A + E + N N++N DD G+ ES Q
Sbjct: 472 LLGYKTLKPKNDEDDSKVDESVAKDSTTPNELSKNANNENYDDDSSFYGKLAESVQEVSI 531
Query: 100 SQNADS 105
+ D+
Sbjct: 532 ADKKDA 537
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 46 TMPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESG 94
T K S+++ + + + TT TTS +S +TD + N + G
Sbjct: 151 TSTTKDSETAKEEDDASSSTTKAVEATTSKASSAHTDTLATSASNSDRG 199
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 26.6 bits (56), Expect = 2.2
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 49 LKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRN 108
L K +S TET + + +T T +NE T ++++ + D S S N D
Sbjct: 156 LSKRESCLSTETSSSKFSAVTAATITNE----TQSEKRSSQTDPSLPFKTNSLNCD-VTY 210
Query: 109 DEGP 112
+EGP
Sbjct: 211 EEGP 214
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 26.6 bits (56), Expect = 2.2
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 31 PPNNSDSDRVVVGVLTMPLK-KSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGE 89
P + S ++ VL+ L +++S T+E T G + T + S N D Q + E
Sbjct: 1190 PSSKSSTEEPNESVLSGHLDLDTEASPVVSTIEKTTKG-DVSVTEEQQSANIDGQLEKPE 1248
Query: 90 NDESGQNDEASQ-----NADSPRNDE 110
+ES + D +Q + P+N E
Sbjct: 1249 IEESKKPDVLNQVSLSIEEEKPKNKE 1274
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.2 bits (55), Expect = 2.9
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 52 SQSSSKTETMEADTTG-ITLETTSNENSQNTDDQEQAGENDES 93
S +SS++ +D + IT E+T N + TD +Q+ E+ S
Sbjct: 223 SVASSESTIANSDQSSFITYESTQNPTANKTDASQQSTESTSS 265
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 57 KTETMEADTTGITLETTSNENSQNTDDQEQAGENDESG-QNDE 98
K TM D G+ ++ +S N +G NDE +ND+
Sbjct: 601 KINTMRCDLKGLIRRLSTEWSSNNERQSLSSGSNDEEDKENDD 643
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/48 (25%), Positives = 20/48 (41%)
Query: 55 SSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQN 102
+ + E EAD G+ T ++ + + E E DES + N
Sbjct: 468 TEENEAAEADYPGVNRNTRQDDVQDISMETESQNETDESQNTENVDYN 515
>SPAC3A12.13c |||translation initiation factor eIF3 complex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 274
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 73 TSNENSQNTDDQEQAGE--NDESGQNDEAS---QNADSPRNDEG 111
+S++ + DD+E E N ES QND S +++ S +ND+G
Sbjct: 28 SSSKPKKRFDDEEDEDEEENKESLQNDSHSVSQKSSSSSQNDQG 71
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 71 ETTSNENSQNTDDQEQAGENDE-SGQNDEASQNAD 104
E +EN ++ +D E+ E++E NDE Q D
Sbjct: 369 EEDDDENEEDEEDSEETSESEEDESVNDEKPQVID 403
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 72 TTSNENSQNTDDQEQA--GENDESGQNDEASQNADS 105
T SNEN+ D E+A +E+ ++++S +A S
Sbjct: 85 TISNENNNENDTTEEAETSSGNEAADDEDSSSDAQS 120
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 25.4 bits (53), Expect = 5.1
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 42 VGVLTMPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQ 101
V LT+ +K QS T ++ D T N + Q++++ Q+ + + D ++
Sbjct: 869 VNALTLTSRKGQSVRGTISVNCDYRPCLRLNTDNSSKQSSEN-VQSATDPTTPAKDNSTS 927
Query: 102 NADS 105
NA++
Sbjct: 928 NAET 931
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 25.4 bits (53), Expect = 5.1
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 53 QSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQND 97
+SS T + A E TSN N +++E NDE+ ND
Sbjct: 397 KSSFPTSSTPASVGAEKSEETSNGNKSEQEEKENG--NDETRSND 439
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.4 bits (53), Expect = 5.1
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 47 MPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEAS 100
+P K+SQ S D+T + ++ S + + T D ++ ++DE G+ + S
Sbjct: 1049 LPQKESQERSSPSPENQDSTPLAPKSVSPKQAARTLDIDENYDDDE-GEKETVS 1101
>SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 840
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 56 SKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADS 105
S+ E+ + + T +E+ N N NT Q ++ + N D+
Sbjct: 760 SQNESSQENATYTVVESNGNANGDNTATNSQGATDNGQTTTNTTQNNVDN 809
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 76 ENSQNTDDQEQAGENDESGQNDEASQNADSPRNDE 110
E+SQ+TDD + +N+ S ND + N R D+
Sbjct: 382 EDSQSTDDSSKDDDNN-SESNDMSPHNDAETRADD 415
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 69 TLETTSNENSQNTDDQEQAGENDESGQNDEASQN 102
T+ SN NS +T +QA N +N+ A ++
Sbjct: 187 TIPKVSNSNSSDTSTDDQAYLNVSVSENEHADRS 220
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 71 ETTSNENSQNTDDQEQAGENDESGQNDEASQNAD 104
E T+ + DD + +N++S E S NAD
Sbjct: 237 EQTAAFEEYDDDDDDDVDDNEQSNSMIETSANAD 270
>SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 25.0 bits (52), Expect = 6.7
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 59 ETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPR 107
E E + I + NE QN DD E E ND NA+SP+
Sbjct: 135 EKDELEEERIAEDIAQNEVEQNIDDVEDLEE-----VNDTLDANAESPQ 178
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 64 DTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRND 109
D + + E + D+ E+ E DE G+ DE + D D
Sbjct: 166 DAPPVQPDADEEEEEEEADEMEE--EFDEEGEGDEEEEEEDDGDGD 209
>SPCC188.02 |par1||protein phosphatase regulatory subunit Par1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 548
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 67 GITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRND 109
GI + S SQ+T + E+ +S +D + +SP D
Sbjct: 3 GIKSKMLSRGKSQDTQKSSKKKESKKSNSHDSSKAPKESPSTD 45
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 25.0 bits (52), Expect = 6.7
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 52 SQSSSKTETMEADTT-GITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRNDE 110
S+ S K E A+T +T S+ENSQ + + DE + + + P+ E
Sbjct: 687 SKISEKQENNVAETILEVTSSPKSSENSQKQSEITKKRGRDEEDEPSDLHSSPKRPKTGE 746
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 52 SQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRND 109
S + + T+ A + TL + + S A + + ++S D+P ND
Sbjct: 1103 SVEGTASSTIAAAASAATLSSDAASGSSTVTSSATASSSSSAATTADSSVTTDTPSND 1160
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 25.0 bits (52), Expect = 6.7
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 59 ETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSP 106
E+ + D T ++EN DD A + + N +A++N ++P
Sbjct: 422 ESADKDAEMNEASTATSENEDLKDDLSLADLSSKKTANSQATENNNTP 469
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 24.6 bits (51), Expect = 8.9
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 30 RPPNNSDSDRVVVGVLTMPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGE 89
R P + + + V + S KT A +T ETT NE + D + A E
Sbjct: 360 RKPTGKRQNFINITVTDPSKNLYERSVKTAAELASLQNVT-ETTDNEIPNSPDFLDAASE 418
Query: 90 NDE 92
DE
Sbjct: 419 EDE 421
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 24.6 bits (51), Expect = 8.9
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 73 TSNENSQNTDDQEQAGENDESGQN-DEASQNADS 105
+ E +++ +E AGE++E G N D+ + DS
Sbjct: 225 SEEEVDGHSEGKELAGESEEEGSNVDDVEDSGDS 258
>SPAC24B11.07c |||ketopantoate reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 71 ETTSNENSQNTDDQEQAGENDESGQND 97
E S NS + + + GE D+SG+++
Sbjct: 489 EVLSRPNSNSNSAESRNGETDDSGESE 515
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/59 (16%), Positives = 24/59 (40%)
Query: 53 QSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNADSPRNDEG 111
Q + +++ + ++ N N QN ++ + + QN + N+ N +G
Sbjct: 585 QHQQSSSSLQGLASSFLNSSSGNSNKQNYNNNNNQNYGNNNNQNYNNNNNSSQGGNSQG 643
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/22 (40%), Positives = 17/22 (77%)
Query: 79 QNTDDQEQAGENDESGQNDEAS 100
+N+DD++Q EN+++ ND+ S
Sbjct: 70 KNSDDKDQLTENNDNLYNDKKS 91
>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 231
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 53 QSSSKTETMEADTTGITLETTSNENSQNTDD 83
+ + + +T EADTTG ++ S + +N+ D
Sbjct: 128 EENFEDKTWEADTTGQFIQIESRKKRKNSPD 158
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 24.6 bits (51), Expect = 8.9
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 36 DSDRVVVGVLTMPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQ 95
DSD V + + + S +K E +A L EN +Q++A
Sbjct: 17 DSDEEVQRISDKVNQLNTSENKNEDQKATNLSDRLGPKITENVDAKSEQDKATNTIAEDA 76
Query: 96 NDEASQNADS 105
N + S+N +S
Sbjct: 77 NTKQSENDES 86
>SPAC22E12.19 ||SPAC2E12.01|histone deacetylase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 661
Score = 24.6 bits (51), Expect = 8.9
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Query: 50 KKSQSSSKTETMEADTTGITLETTSNE--------NSQNTDDQEQAGENDESGQNDEASQ 101
KKS+ S+ +EA T E +N+ ++ NT D + EN ES + +
Sbjct: 325 KKSKGSALMVDIEAADINKTEENINNQFQEASVTADNMNTWDNTPSVENVESANENVNNH 384
Query: 102 NADSPRNDE 110
NAD +++
Sbjct: 385 NADEQMDEK 393
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 59 ETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQ 101
ET E+D ++ + NE + +D + A + +G+ E +
Sbjct: 442 ETSESDDDANSISSMENEEERTSDSKSSAKQGKGNGRAKETPE 484
>SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/51 (23%), Positives = 27/51 (52%)
Query: 54 SSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDESGQNDEASQNAD 104
++S+T T ++ TL +TSN+ S + +++ ++A++N D
Sbjct: 191 ANSQTPTTTRASSYTTLVSTSNQVSNEAEASAVETSANQAQNTEDATENED 241
>SPAC22E12.07 |rna1||Ran GAP Rna1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 386
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 82 DDQEQAGENDESGQNDEASQNADSPRNDEGPK 113
DD E+ + +E + +EA + P E K
Sbjct: 341 DDMEELTDEEEEDEEEEAESQSPEPETSEEEK 372
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 24.6 bits (51), Expect = 8.9
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 34 NSDSDRVVVGVLTMPLKKSQSSSKTETMEADTTGITLETTSNENSQNTDDQEQAGENDES 93
+S S + VV VL + KS+SS+ E E D S S+ +D ++ +G E+
Sbjct: 36 SSRSTKPVVDVLKV---KSESSAD-ELEERDAHLDRFRRDSTFESETSDHEDFSG-GSEN 90
Query: 94 GQNDEASQNADS 105
++E ++NA+S
Sbjct: 91 ELDEETTKNANS 102
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 24.6 bits (51), Expect = 8.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 31 PPNNSDSDRVVVGVLTMPLKKSQSSSKTETM 61
P +D RV VG L+ KKS+ S ET+
Sbjct: 37 PAQQADDFRVFVGRLSTSTKKSEIRSLFETV 67
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 76 ENSQNTDDQEQAGENDESGQNDEASQNADSPRNDE 110
E+ N ++ E+ + +E + DE D DE
Sbjct: 95 EDEDNVEENEEEADANEEEEEDEEDDEEDEEDEDE 129
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 79 QNTDDQEQAGENDESGQNDEASQNADSPR 107
+N D+ + +DE+ ND+ D+PR
Sbjct: 6 ENADELHRMDSSDEASINDDQEDILDTPR 34
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.297 0.117 0.321
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,210
Number of Sequences: 5004
Number of extensions: 26380
Number of successful extensions: 171
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 95
Number of HSP's gapped (non-prelim): 85
length of query: 184
length of database: 2,362,478
effective HSP length: 69
effective length of query: 115
effective length of database: 2,017,202
effective search space: 231978230
effective search space used: 231978230
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 44 (22.0 bits)
S2: 51 (24.6 bits)
- SilkBase 1999-2023 -