Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002058-TA|BGIBMGA002058-PA|undefined
(279 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 32 0.10
SPBC3E7.13c |||splicing factor, SYF2 family|Schizosaccharomyces ... 30 0.32
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 30 0.42
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 30 0.42
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 30 0.42
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 29 0.56
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch... 29 0.98
SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces po... 28 1.3
SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomy... 28 1.3
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 28 1.3
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 28 1.3
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 28 1.7
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 28 1.7
SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual 27 2.3
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 27 2.3
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 2.3
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 27 2.3
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 3.0
SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|... 27 3.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.9
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 26 5.2
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 26 5.2
SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces ... 26 5.2
SPAC664.08c |||traub transciption factor family protein |Schizos... 26 5.2
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 26 6.9
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 26 6.9
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 6.9
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 6.9
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 26 6.9
SPBC13E7.08c |||RNA polymerase II associated Paf1 complex |Schiz... 26 6.9
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 25 9.1
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 25 9.1
SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces po... 25 9.1
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 25 9.1
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 9.1
>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 707
Score = 31.9 bits (69), Expect = 0.10
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 134 RKFSDYSFTHKKLQEEVATEEFRVDAEEEIVDTEDVGVGTEDNEVSMEDAAVGTEEEVIA 193
+K +D K ++E E + D E+ I + +ED+ +SM+ G EE+ +
Sbjct: 25 KKDTDKGIRQKHSKKEGKDETLKRDVEKFIQNVNSEDTPSEDDSMSMDAFLEGGFEELDS 84
Query: 194 TRDVGVGPESDEPIRIPRRYTITTQTMKLLLREMDPITENYTAEREKLKKKD 245
G S + +P T T + E D + E+Y + E LK+KD
Sbjct: 85 ANSNDAG-SSRKRKNLPNENT-QDSTSESSEEEEDGL-ESYQKQLEGLKEKD 133
>SPBC3E7.13c |||splicing factor, SYF2 family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 229
Score = 30.3 bits (65), Expect = 0.32
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 85 VETTDEVSSVQTEDDSIEEYEVNSDWNCDDDNGDLWEQNQWQFDQFFSDRKFSDY 139
+E +E++ ++TE++ ++E W+ + + W+Q + Q + FSDY
Sbjct: 55 MEAEEELAKIETEEEG-GDFERRRAWDWTIEESEKWDQRLRKKKQTIQNVAFSDY 108
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 29.9 bits (64), Expect = 0.42
Identities = 16/69 (23%), Positives = 35/69 (50%)
Query: 162 EIVDTEDVGVGTEDNEVSMEDAAVGTEEEVIATRDVGVGPESDEPIRIPRRYTITTQTMK 221
E+++ E + + ++ E+ ED EEE A RD+ + ES + ++ + ++
Sbjct: 23 ELLEKEHLRMTQQNAEIEKEDEEYNIEEEEEAERDIEISSESSDEEAELKKLEEEGEEVE 82
Query: 222 LLLREMDPI 230
+LR+ + I
Sbjct: 83 KILRDEERI 91
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 29.9 bits (64), Expect = 0.42
Identities = 12/36 (33%), Positives = 25/36 (69%)
Query: 74 NEPSGSTSSQSVETTDEVSSVQTEDDSIEEYEVNSD 109
NE ++ +Q+V+T+ ++SSV+ +++ E+ NSD
Sbjct: 288 NEKKANSPTQNVDTSSKLSSVKFQNEDDEDRRKNSD 323
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 29.9 bits (64), Expect = 0.42
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 93 SVQTEDDSIEEYEVNSDWNCDDDNGDLWEQNQWQFDQFFSDRKFSDYSFTHKKLQEEVAT 152
++ E D +EE + + + DDN D+ E F D + + + ++ E+
Sbjct: 313 TIPQELDLVEEEDQITHYISLDDNLDVQES----LGIFHYDPDYEENEKKYDAIKHEILG 368
Query: 153 EEFRVDAEEEIVDTEDVGVGTEDNEVSMEDAAV 185
EE + EE+ D+E+ ED V+ E V
Sbjct: 369 EEDDDENEEDEEDSEETSESEEDESVNDEKPQV 401
Score = 26.6 bits (56), Expect = 3.9
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Query: 73 KNEPSGSTSSQSVETTDEVSSVQTEDDSIEEYEVNSDWNCDDDNGDLWEQNQWQFDQFFS 132
KN P+ VE D+++ + DD+++ E ++ D D +E+N+ ++D
Sbjct: 309 KNNPTIPQELDLVEEEDQITHYISLDDNLDVQESLGIFHYDPD----YEENEKKYD---- 360
Query: 133 DRKFSDYSFTHKKLQEE--VATEEFRVDAEEEIVDTEDVGVGTEDNEV 178
+ H+ L EE EE D+EE ED V E +V
Sbjct: 361 -------AIKHEILGEEDDDENEEDEEDSEETSESEEDESVNDEKPQV 401
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 29.5 bits (63), Expect = 0.56
Identities = 21/94 (22%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 81 SSQSVETTDEV-SSVQTEDDSIEEYEVNSDWNCDDDNGDLWEQNQWQFDQFFSDRKFSDY 139
+ +SV+ ++ + + + E+D+ E E++ D + D ++ EQ+ W + S++ SD
Sbjct: 663 AKESVKDSEGMFAGEEVEEDAFGETEMDEDDFEEIDTDEIEEQSDW---EMISNQDASDN 719
Query: 140 SFTHKKLQEEVATEEFRV----DAEEEIVDTEDV 169
+KL + + + +V +EEE+++ E +
Sbjct: 720 EELERKLDKVLEDADAKVKDEESSEEELMNDEQM 753
>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 28.7 bits (61), Expect = 0.98
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 150 VATEEFRVDAEEEIVDTEDVGVGTEDNEVSMEDAAVGTEEEVIATRDVGVGPESDEPIRI 209
V T + +D E E+ D ED+ + ++++ + + V +P I
Sbjct: 94 VETSDLNIDVESEVFDLEDINFQNDADDIN-QRFTYNNHPASVENSLTNVNSIHAQPTTI 152
Query: 210 PRRYTITTQT-----MKLLLREMDPITENYTAEREKLKKKDIAQRHEEVA 254
+T +T + + +P T N E+E+ KK + + +A
Sbjct: 153 SDMIDLTDETSYDPRKQKFEQGKNPSTTNAEIEKEEPSKKQVVPSSQRLA 202
>SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 77 SGSTSSQSVETTDEVSSVQTEDDSIEEYEVNSDWNCDDDN 116
SGST Q V + ++T+ DS E+ S+ + ++DN
Sbjct: 188 SGSTRGQKVSNATATTQLETKADSTTPNEMVSEEDMEEDN 227
>SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 73 KNEPSGSTSSQSVETTDEVSSVQTEDDSIEEYEVNSDWNCDDDNGD 118
+N GS QS ++ D + V ++ + DWN D DN +
Sbjct: 575 QNNDDGSKGDQSEDSNDHIEVVPVAS----AHDEDDDWNSDSDNDE 616
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 76 PSGSTSSQSVETTDEV-SSVQTEDDSIEEYEVNS---DWNCDDD 115
PS S SSQSVET + V + T+ S + EV S NCD +
Sbjct: 124 PSVSASSQSVETCETVDEDIDTQTMSSDMSEVQSMEISLNCDHE 167
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 165 DTEDVGVGTEDNEVSMEDAAVGTEEEVIATRDVGVGPESDE 205
+T+D+ GT+DN + + + V E E I + D+ E E
Sbjct: 284 NTDDLLNGTDDNNIVLREVKVSFENEKIESDDLDKNEEISE 324
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 27.9 bits (59), Expect = 1.7
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 143 HKKLQEEVATEEFRVDAEEEIVDTEDVGVGTEDNEVSMEDAAVGTEEEVIATRDVGV 199
H K Q++ T++ A++EI E E+ ++ D + +EE V T D+ V
Sbjct: 408 HFKEQQDSVTKQRIEKAKQEIEKLEAKYNSKEEKTLTEADMVISSEETVTVTNDLEV 464
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 143 HKKLQEEVATEEFRVDAEEEIVD-----TEDVGVG-TEDNEVSMEDAAVGTEEEVIATRD 196
H K+ +E D ++EI D TED G +ED+EVS + G+ +E+ + R+
Sbjct: 134 HSKIDKEFGW--LLEDLDQEIDDIGVPGTEDPSYGHSEDSEVSDDTGDHGSVDELESERE 191
Query: 197 VGVGPESDE 205
G E +E
Sbjct: 192 GNSGEEEEE 200
>SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual
Length = 629
Score = 27.5 bits (58), Expect = 2.3
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 118 DLWEQNQWQFDQFFSDRKFSDYSFTHKKLQE-EVATEE-FRVDAEEEIVDTEDVGVGTED 175
D + W+ F S +K + K L E TE F EEE + ED+ +
Sbjct: 157 DAMFKESWKNKCFISPQKDNQGFSKSKHLSTYEGETENGFSTSTEEEEEEEEDIVSASWV 216
Query: 176 NEVSMEDAAVGTEEEVIATRDVGVGPESDE 205
+ + M+ A+ + E T V + SD+
Sbjct: 217 DNLDMDMASFNSHRERFLTEHVNMDERSDD 246
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 27.5 bits (58), Expect = 2.3
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 73 KNEPSGSTSSQSVETTDEVSSVQTEDDSIEEYEVNSDWNCDDDNGDLWEQNQWQFDQFFS 132
+++ S S S+S E TD ++ E DS E E + + D +N D N + +
Sbjct: 179 ESDASSSNDSES-ELTDSADNMN-ESDSESEIESSDSDHDDGENSDSKLDNLRNYIVSLN 236
Query: 133 DRKFSDYSFTHKKLQ-------EEVATEEFRVDAEEEIVDTEDVGVGTEDNEVSMED 182
++ D + L EE++ ++ + D E ++E +G+ + + + D
Sbjct: 237 QKRKKDEADAESVLSSDDNDSIEEISIKKVKYDPHETNKESEYNLIGSSEKTIDITD 293
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.5 bits (58), Expect = 2.3
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Query: 73 KNEPSGSTSSQSVETTDEVSSVQTEDDSIEEYEVNSDWNCDD--DNGDLWEQNQWQFDQF 130
K E +V D+ + ++D++EE E +D N ++ D D E + + +
Sbjct: 76 KGEDGNENEVDNVNNNDK----KEDEDNVEENEEEADANEEEEEDEEDDEEDEEDEDESG 131
Query: 131 FSDRKFSDYSFTHKKLQEEVATEEFRVDAEEEIVDTEDVGVGTEDNEVSMEDAA 184
RK + + ++ L E VD +EE ++ E+ +G ED + E A
Sbjct: 132 GGRRKRARHDRRNQFLDIEA-----EVDEDEEELEDEEDEIGREDGFIEEEVGA 180
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 27.5 bits (58), Expect = 2.3
Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 73 KNEPSGSTS-SQSVETTDEVSSVQTEDDSIEEYEVNSDWNCDDDNGDLWEQNQWQFDQFF 131
K EP S S + ++++ + EDDS+E E+ + NQ Q +
Sbjct: 274 KEEPKPSVDRSTGIVNSEDIKELSVEDDSLELKEITPEALDIGQTSLFTTLNQTQVKK-E 332
Query: 132 SDRKFSDYSFTHKKLQEEVATE-EFRVDAEEEIVDTEDVGVGTEDNE 177
++KF K ++++ +E E V + +D + +E+NE
Sbjct: 333 DNKKFLLKEINAKLNEDDIDSELEIEVKPKTTALDNIEKSKLSEENE 379
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 147 QEEVATEEFRVDAEEEIVDTEDVGVGTEDNEVS--MEDAAVGTEEEVIATRDVGVGP 201
+EE E + EE I ++ GV TE NE+ E + + + +G+ P
Sbjct: 2213 EEETRQPEVNIQPEEPINTSDMEGVTTEANEIGSYQEPSLINIRGREVDVSSLGIDP 2269
>SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 76 PSG-STSSQSVETTDEVSSVQTEDDSIEEYEVNSDWNCDDDNG 117
P G S+S+ + ++ +V++ QTE + E +W+ D+G
Sbjct: 463 PKGLSSSNDEINSSQKVATQQTEGSDQDGEEAEEEWHGISDDG 505
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 79 STSSQSVETTDEVSSVQTEDDSIEEYEVNSDWNCDDDNGDLW 120
ST + S + S+ T D S+ ++D+N + D LW
Sbjct: 1130 STVTSSATASSSSSAATTADSSVTTDTPSNDFNANVDTAGLW 1171
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 74 NEPSGSTSSQSVETTDEVSSVQTEDDSIEEYEVNSDWNCDDDNG 117
N SG+T + + +TT +V + + + DW C D G
Sbjct: 124 NTSSGTTLNSTSKTTTSSVAVDDQKSKSDSKKERRDWTCLDLGG 167
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 149 EVATEEFRVDAEEEIVDTED-VGVGTEDNEVSMEDAAVGTEEEVIATR 195
E A EE + EE+I+D E+ V E+ E E+ T E V+ ++
Sbjct: 54 EEALEEDDTNYEEDIIDDEESAQVDEEELEEEEEEEEDATPEPVVTSK 101
>SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 179 SMEDAAVGTEEEVIATRDVGVGPESDEPIRIPR-RYTITTQTMKLLLREMDPITENYTAE 237
S + ++ ++ +++ + VG + E + + R R T TT M+ L RE+ PI +
Sbjct: 30 SSSEKSIESDFQMLESIGFQVGRKITERLLLNRNRITETTDVMRFLCRELWPIVFRKPLD 89
Query: 238 REKLKKKDI 246
K ++ I
Sbjct: 90 NLKTNRRGI 98
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 77 SGSTSSQSVETTDEVSSVQTEDDSIEEYEVN 107
SGS +SQS ++E S + E+D++ E N
Sbjct: 82 SGSLNSQSSSPSEEEDSEEDENDAVSEDHEN 112
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 6.9
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 158 DAEEEIVDTEDV--GVGTEDNEVSMEDAAVGTEEEVIATRDVGVGPESDEPIRIPRRYTI 215
DA+ +++D + GT + VS + G + + V +P+ P+
Sbjct: 384 DAQPDLLDMSTLYESKGTVEKAVSATVPSAGAQVQKHNEEKVETPKPEAQPVSKPKESAE 443
Query: 216 TTQTMKLLLREMDPITENYTAEREKLKKKDIAQRHEEVALTLQKR 260
+ K E+ P T + + E KK+D +E +T KR
Sbjct: 444 EQKPSKE--PEVKPTTPSASKVEEPSKKRDEDNHQKEETVTQPKR 486
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 25.8 bits (54), Expect = 6.9
Identities = 16/57 (28%), Positives = 22/57 (38%)
Query: 166 TEDVGVGTEDNEVSMEDAAVGTEEEVIATRDVGVGPESDEPIRIPRRYTITTQTMKL 222
T+ + D V ED GT+ +I V +R P R +I T KL
Sbjct: 734 TDSYKIRRYDANVQAEDFRFGTDRSLIVALPDDVAMVDKSSLRRPTRESICTPVKKL 790
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 74 NEPSGSTSSQSVETTDEVSSVQTEDDSIEEYEVNSDWNCDDDNGD 118
N+ + SS E DE +S + D+S E+ + D N D+ N D
Sbjct: 330 NQSINADSSAGSEGVDEGTSTEANDESSEDDD--EDNNTDEANED 372
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 200 GPESDEPIRIPRRYTITTQTMKLLLREMDPITENY 234
G S+ PI P + + +QT K L + + TE Y
Sbjct: 757 GSPSETPISKPEKVPVVSQTEKALPKPLGVDTEKY 791
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 25.8 bits (54), Expect = 6.9
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 154 EFRVDAEEEIVDTEDVGVGTEDNEVSMEDAAVGTEEEVIATRDVGVGPESDEPIRIPRRY 213
+F ++ EEE DTE V + D E S DA +EEE + ++ + I
Sbjct: 7 DFGLEQEEE--DTEFVPGDSTDTESSFSDAD-SSEEEFVEEKEASQVQSTKSKIATSESE 63
Query: 214 TITTQTM-KLLLREM-DPITENYTAEREKLKK 243
+T + + K RE D + + E E ++K
Sbjct: 64 DVTLKNIAKKNKRERNDKLIPQQSNESEAIEK 95
>SPBC13E7.08c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 25.8 bits (54), Expect = 6.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Query: 146 LQEEVATEEFRVDAEEEIVDTEDVGVGTE------DNEVSMEDAAVGTEEE 190
+ EE EE + EE+ D E+VG G++ D E S+ A + E+
Sbjct: 339 IAEEEEEEEQEEEQEEDEEDEEEVGAGSDIKGFDADKEASVARATINKYED 389
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 25.4 bits (53), Expect = 9.1
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 83 QSVETTDEVSSVQTEDDSIEEYEVNSDWNCDDDNGDLWEQNQWQFDQFFSDRKF 136
QS + S+ +D S + + NCDD D + ++++D+ + D ++
Sbjct: 378 QSSFRNERFSNYYGDDRSYHKRRNTGNKNCDDHLRDKSPERRYRYDRRYRDDRY 431
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 77 SGSTSSQSVETTDEVSSVQTEDDSIEEYEVNSDWNCDDDN 116
S +TSSQSV +T SS +T + S+ N D N
Sbjct: 178 SRTTSSQSVASTMTKSSTKTSKKKSSKKNSKSESNQDSSN 217
>SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 596
Score = 25.4 bits (53), Expect = 9.1
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 85 VETTDEVSSVQTEDDSIEEYE--VNSDWNCDDDNGDLWEQNQWQFDQFFSDRKFSDYSFT 142
V D + S + +DS+ ++ + C DD GD+ + +++ F D+ Y
Sbjct: 105 VSGIDYIRSPEFFNDSLVRFQELLRIPTVCYDDMGDVGDDDRFDIFAVFQDKVRELYPNI 164
Query: 143 HKKLQEE 149
KKL+ E
Sbjct: 165 FKKLKVE 171
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 25.4 bits (53), Expect = 9.1
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 149 EVATEEFRVDAEEEIVDTEDVGVGTEDNEVSMEDAAVGTEEEVIATRDVGVGPESDE-PI 207
+VA +EF + +++ I+ E + ED E S+ A VG ++ R + E E P+
Sbjct: 187 DVAPDEFGIVSQDTIIHWEGEPINREDEESSL--AEVGYDDIGGCRRQMAQIRELVELPL 244
Query: 208 RIPRRY 213
R P+ +
Sbjct: 245 RHPQLF 250
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.4 bits (53), Expect = 9.1
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 88 TDEVSSVQTEDDSIEEYEVNSDWNCDDDNGDLWEQNQWQFDQFFSDRKFSDYSF--THKK 145
T ++ E++ + Y V+SD N D+ + +Q+Q F Q + +F++ + HK
Sbjct: 464 TSNTLPLEPEEELVTRYSVSSDGNTVDE--AITKQSQ-TF-QLVNSNEFNEVNANDVHKS 519
Query: 146 LQEEVATEEFRVDAEEEIVDTE 167
L++ A +F + ++ E
Sbjct: 520 LRQNCAKLDFDDSKSKNLLSVE 541
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.307 0.126 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,076,054
Number of Sequences: 5004
Number of extensions: 44174
Number of successful extensions: 188
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 165
Number of HSP's gapped (non-prelim): 44
length of query: 279
length of database: 2,362,478
effective HSP length: 72
effective length of query: 207
effective length of database: 2,002,190
effective search space: 414453330
effective search space used: 414453330
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 53 (25.4 bits)
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