GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002058-TA|BGIBMGA002058-PA|undefined
         (279 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   3.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   4.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.2  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 174 EDNEVSMEDAAVGTEEEVIATRDVGVGPESDEPIR 208
           E+      DA + TEEEV+  + +   PES+  ++
Sbjct: 53  EEARQRANDAGL-TEEEVVLAKTIAECPESENTVQ 86



 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 137 SDYSFTHKKLQEEVATEEFRVDAEEEI 163
           ++Y    KK+QEE   E  R+   +E+
Sbjct: 257 AEYRRNFKKMQEEKIFEPHRIPQLQEV 283


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 120 WEQNQWQFDQFFSDRK 135
           W +N W+ D FF + K
Sbjct: 114 WLKNMWRPDSFFKNAK 129


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/21 (42%), Positives = 16/21 (76%)

Query: 88  TDEVSSVQTEDDSIEEYEVNS 108
           T++ +S +T+DDSI+   +NS
Sbjct: 214 TNDSTSSKTDDDSIDFDRMNS 234


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/21 (42%), Positives = 16/21 (76%)

Query: 88  TDEVSSVQTEDDSIEEYEVNS 108
           T++ +S +T+DDSI+   +NS
Sbjct: 252 TNDSTSSKTDDDSIDFDRMNS 272


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 122 QNQWQFDQFFSD 133
           Q QWQFD +  D
Sbjct: 381 QRQWQFDVYSKD 392


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.307    0.126    0.340 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,564
Number of Sequences: 429
Number of extensions: 2561
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 279
length of database: 140,377
effective HSP length: 57
effective length of query: 222
effective length of database: 115,924
effective search space: 25735128
effective search space used: 25735128
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 43 (21.4 bits)